FC929940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929940 vs. ExPASy Swiss-Prot
Match: T184A_MOUSE (Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14 Identity = 62/208 (29.81%), Postives = 102/208 (49.04%), Query Frame = 2 Query: 89 FLTRILATMNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTHFQPRTTRLNHHTLKLLKDWTWQFVVIRPVCSILMIALQL--------LGLYSNWISWTFTIILNISVSLALYSLVIFY 688 FLT LA V+ + ++LT H Q+ S H S+ P+EQ+ DS++ L+ G ++++ +SV++CYEA VI FL L + YL ++ + EI+G+ I S R + L+ K T QF +++PV +++ I LQ ++S ++ T++ N SVSLALY+L +FY Sbjct: 52 FLTSALAR----GVSGVFVWTALLLTGH---QIYS-HLRSYTAPREQRFVIRLLFIVPIYAFDSWLSLL-LLGGHPYYVYFDSVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITFLRFCKQATLQFCIVKPVMALITIILQAFDKYHDGDFNIHSGYL--YVTLVYNASVSLALYALFLFY 245
BLAST of FC929940 vs. ExPASy Swiss-Prot
Match: T184B_MOUSE (Transmembrane protein 184B OS=Mus musculus GN=Tmem184b PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14 Identity = 54/174 (31.03%), Postives = 88/174 (50.57%), Query Frame = 2 Query: 197 HFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHS--FPMTHFQPRTTRLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLY--------SNWISWTFTIILNISVSLALYSLVIFY 688 H + +P EQ+ DS++ L+ F + ++++ +V++CYEA VI FL+L Y YL ++ + EI+G+ I S + +T + L+ K T QF V++P+ ++ + LQ G Y S ++ TII NISVSLALY+L +FY Sbjct: 68 HLRCYSRPNEQRHIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEAFVIYNFLSLCYEYLG---GESAIMSEIRGKAIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFCVVKPLMAVSTVILQAFGKYRDGDFDVTSGYL--YVTIIYNISVSLALYALFLFY 233
BLAST of FC929940 vs. ExPASy Swiss-Prot
Match: T184A_RAT (Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14 Identity = 62/208 (29.81%), Postives = 102/208 (49.04%), Query Frame = 2 Query: 89 FLTRILATMNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTHFQPRTTRLNHHTLKLLKDWTWQFVVIRPVCSILMIALQL--------LGLYSNWISWTFTIILNISVSLALYSLVIFY 688 FLT LA V+ + ++LT H Q+ S H S+ P+EQ+ DS++ L+ G ++++ +SV++CYEA VI FL L + YL ++ + EI+G+ I S R + L+ K T QF +++PV +++ I LQ ++S ++ T++ N SVSLALY+L +FY Sbjct: 52 FLTSALAR----GVSGVFVWTALLLTGH---QIYS-HLRSYTVPREQRFVIRLLFIVPIYAFDSWLSLL-LLGGHPYYVYFDSVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITFLRFCKQATLQFCIVKPVMALITIILQAFDKYHDGDFNIHSGYL--YVTLVYNASVSLALYALFLFY 245
BLAST of FC929940 vs. ExPASy Swiss-Prot
Match: T184B_HUMAN (Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14 Identity = 55/174 (31.61%), Postives = 88/174 (50.57%), Query Frame = 2 Query: 197 HFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHS--FPMTHFQPRTTRLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLY--------SNWISWTFTIILNISVSLALYSLVIFY 688 H + P EQ+ DS++ L+ F + ++++ +V++CYEALVI FL+L Y YL ++ + EI+G+ I S + +T + L+ K T QF V++P+ ++ + LQ G Y S ++ TII NISVSLALY+L +FY Sbjct: 68 HLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEALVIYNFLSLCYEYLG---GESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFCVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYL--YVTIIYNISVSLALYALFLFY 233
BLAST of FC929940 vs. ExPASy Swiss-Prot
Match: T184B_BOVIN (Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14 Identity = 55/174 (31.61%), Postives = 88/174 (50.57%), Query Frame = 2 Query: 197 HFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHS--FPMTHFQPRTTRLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLY--------SNWISWTFTIILNISVSLALYSLVIFY 688 H + P EQ+ DS++ L+ F + ++++ +V++CYEALVI FL+L Y YL ++ + EI+G+ I S + +T + L+ K T QF V++P+ ++ + LQ G Y S ++ TII NISVSLALY+L +FY Sbjct: 68 HLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEALVIYNFLSLCYEYLG---GESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFCVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYL--YVTIIYNISVSLALYALFLFY 233
BLAST of FC929940 vs. ExPASy Swiss-Prot
Match: T184A_HUMAN (Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14 Identity = 54/172 (31.40%), Postives = 85/172 (49.42%), Query Frame = 2 Query: 197 HFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTHFQPRTTRLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLY--------SNWISWTFTIILNISVSLALYSLVIFY 688 H S+ P+EQ+ DS++ L+ G ++++ +SV++CYEA VI FL+L + YL + + EI+G+ I S R + L+ K T QF +++PV ++ I LQ G Y S ++ T+I N SVSLALY+L +FY Sbjct: 77 HLRSYTVPQEQRYIIRLLLIVPIYAFDSWLSLL-LLGDHQYYVYFDSVRDCYEAFVIYSFLSLCFQYLG---GEGAIMAEIRGKPIKSSCLYGTCCLRGMTYSIGFLRFCKQATLQFCLVKPVMAVTTIILQAFGKYHDGDFNVRSGYL--YVTLIYNASVSLALYALFLFY 242
BLAST of FC929940 vs. ExPASy Swiss-Prot
Match: T184A_BOVIN (Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13 Identity = 51/172 (29.65%), Postives = 85/172 (49.42%), Query Frame = 2 Query: 197 HFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTHFQPRTTRLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLY--------SNWISWTFTIILNISVSLALYSLVIFY 688 H S+ P EQ+ DS++ L+ G +++ +SV++CYEA VI FL+L + YL ++ + EI+G+ + S R + L+ K T QF +++P+ +++ I LQ G Y S ++ T++ N SVSLALY+L +FY Sbjct: 67 HLRSYTVPHEQRYIIRLLFIVPVYAFDSWLSLL-LLGGHQHYIYFDSVRDCYEAFVIYSFLSLCFQYLG---GESAIMAEIRGKPVRTSCFHGTCCLRGMTYSIGFLRFCKQATLQFCIVKPIMALVTIVLQAFGKYHDGDFNVRSGYL--YITLVYNASVSLALYALFLFY 232 The following BLAST results are available for this feature:
BLAST of FC929940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929940 ID=FC929940; Name=FC929940; organism=Citrus clementina; type=EST; length=700bpback to top |