FC930103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930103 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.838e-50 Identity = 98/211 (46.45%), Postives = 133/211 (63.03%), Query Frame = 2 Query: 2 VLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXXWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANP 634 VL + +T LY +S PIL +G+S IA +F G+IPQI+A+AL P+Q+FLQAQ+IV P AY+S ++H LL+W+ WW++V +YI+ S CK TW GF+ +AF G+ +FKL+ ASAVMLCLE WY Q LV+++GLL NP ++LD++SICM W +G +AA SVRVSNELGA NP Sbjct: 138 VLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLVAVNGMYILMSPNCKETWTGFSTRAFRGIWPYFKLTVASAVMLCLEIWYNQGLVIISGLLSNPTISLDAISICMYYLNWDMQFMLGLSAAISVRVSNELGAGNP 348
BLAST of FC930103 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.961e-19 Identity = 61/204 (29.90%), Postives = 104/204 (50.98%), Query Frame = 2 Query: 38 LYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQ-KFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXXWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPNRRR 646 +++ + +L+ L + PD+A A V+V IP + A A F +Q ++LQ+Q I+ P + A VV++ ++ +Y + + F+Y+ HTW G+T + F S+ +L+ S M+C+E W F+I LAGL+ EL + ++ ++ +M+ GF AASVRV N LGA N ++ R Sbjct: 142 IFLNTERLLLLLRQDPDVARLAQVYVMICIPALPA-AFLFQLQTRYLQSQGIIMPQVIVGIAANVVNVGMNAFLLYALDLGVVGSAWANTTSQFFLSALLFLYVWWKRIHIHTWGGWTRECFQEWSSYTRLAIPSMFMVCIEWWTFEIGTFLAGLVNVTELG--AQAVIYELASVAYMVPFGFGVAASVRVGNALGAGNADQAR 342
BLAST of FC930103 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.551e-18 Identity = 59/210 (28.10%), Postives = 106/210 (50.48%), Query Frame = 2 Query: 2 VLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXXWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAAN 631 ++L L + L++ ++ IL+ + P ++ +V IP + A L K+L Q IV P A +V+ L +++ VY+ + + + F+YI++S + TW G++++ SFF+L+ S +MLC+E W ++I L+G+L EL S++ + + V+MI +G + A +VRV N LGA N Sbjct: 120 LILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQTYVTIFIPALPATFLYTLQVKYLLNQGIVLPQVVTGVAANLVNALANYLFVYQLHLGVMGSALANTVAQFTLALLLFLYILRSKVYQATWGGWSLECLQDWASFFRLAIPSMLMLCMEWWAYEIGSFLSGILGMVELGAQSVTYELAVI--VYMIPMGLSVAVNVRVGNALGAGN 327
BLAST of FC930103 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.696e-18 Identity = 61/216 (28.24%), Postives = 110/216 (50.93%), Query Frame = 2 Query: 2 VLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQ-KFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXXWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPNRRR 646 ++L L L + + PIL+ + +SP++AS + ++V +P + A A + +Q ++LQ Q I+ P A +++ L+++V ++ + + + +VYI + K TW G++ +F +L+ S +MLC+E W ++I LAGL+ EL + S+ ++ +M +GF AASVRV N LGA N R + Sbjct: 139 LILLLACFPCWALLINTEPILLAVRQSPNVASLSQLYVKIFMPALPA-AFMYQLQGRYLQNQGIIWPQVITGAAGNILNALINYVFLHLLELGVAGSAAANTISQYSLAVFLYVYIRWKNLHKATWDGWSRDCLQEWGAFIRLALPSMLMLCVEWWTYEIGGFLAGLISETELG--AQSVVYELATIAYMFPLGFAVAASVRVGNALGAGNTERAK 351
BLAST of FC930103 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17 Identity = 59/217 (27.19%), Postives = 105/217 (48.39%), Query Frame = 2 Query: 20 GILMTVLYVF--------SRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXXWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPNRRR 646 GIL+ +L+ F + IL+ + P+++ ++V +P + A L + K+LQ Q I+ P + + L +++ +Y +I +I F+YIV TW G++ F +F +L+ AS +MLC+E W F+I + LAG+L +LA ++ + I V++I +G A S+RV + LGA N + + Sbjct: 133 GILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQLLAKYLQNQGIIYPQVLTGFIANIFNALFNYILLYVLGLGVMGSACANTVSQFIQMILLFLYIVWRRLYADTWGGWSQACFEEWGAFIRLAVASMLMLCIEWWAFEISMFLAGVLGMVDLAAQAIIYQVAIV--VYLIPLGLCIAGSIRVGHGLGAGNTEQAK 347
BLAST of FC930103 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17 Identity = 59/198 (29.80%), Postives = 97/198 (48.99%), Query Frame = 2 Query: 38 LYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXXWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAAN 631 L++ + IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L ++V +Y + + I F+YI+ + TW G++ + SF +L+ S +MLC+E W +++ L+G+L EL S++ + I V+MI GF+ AA+VRV N LGA N Sbjct: 133 LFINTEQILLLFRQDPDVSRLTQTYVMIFIPALPAAFLYTLQVKYLLNQGIVLPQIMTGIAANLVNALANYVFLYHLHLGVMGSALANTISQFALAIFLFLYILWRRLHQATWGGWSWECLQDWASFLRLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSITYELAII--VYMIPSGFSVAANVRVGNALGAGN 328
BLAST of FC930103 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17 Identity = 56/203 (27.59%), Postives = 101/203 (49.75%), Query Frame = 2 Query: 38 LYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXXWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPNRRR 646 L++ ++ IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ + + + F+YI+ + TW G++++ SF +L+ S +MLC+E W +++ L+G+L EL S+ + I V+M+ GF+ AASVRV N LGA + + R Sbjct: 133 LFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDWASFLRLAIPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVYELAII--VYMVPAGFSVAASVRVGNALGAGDMEQAR 333
BLAST of FC930103 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.924e-17 Identity = 57/198 (28.79%), Postives = 97/198 (48.99%), Query Frame = 2 Query: 38 LYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXXWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAAN 631 L++ + IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ + + I F+YI+ TW G++ + SF +L+ S +MLC+E W +++ L+G+L EL S++ + I V+MI GF+ AA+VRV N LGA N Sbjct: 132 LFINTEQILLLFRQDPDVSRLTQTYVMVFIPALPAAFLYTLQVKYLLNQGIVLPQVITGIAANLVNALANYLFLHQLHLGVMGSALANTISQFALAIFLFLYILWRKLHHATWGGWSWECLQDWASFLQLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSITYELAII--VYMIPAGFSVAANVRVGNALGAGN 327
BLAST of FC930103 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.924e-17 Identity = 56/203 (27.59%), Postives = 99/203 (48.77%), Query Frame = 2 Query: 38 LYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXXWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPNRRR 646 L++ ++ IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ + + + F YI+ + TW G++++ SF L+ S +MLC+E W +++ L+G+L EL S+ + I V+M+ GF+ AASVRV N LGA + + R Sbjct: 133 LFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGAIGSALANLISQYTLALLLFFYILGKKLHQATWGGWSLECLQDWASFLHLAVPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVYELAII--VYMVPAGFSVAASVRVGNALGAGDMEQAR 333
BLAST of FC930103 vs. ExPASy Swiss-Prot
Match: YAO6_SCHPO (Uncharacterized transporter C11D3.06 OS=Schizosaccharomyces pombe GN=SPAC11D3.06 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.819e-17 Identity = 64/221 (28.96%), Postives = 106/221 (47.96%), Query Frame = 2 Query: 2 VLLTLTGILMTVLYV-------FSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXXWWI--VVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPN 637 +LL I++++LY+ +S+PILIFL ++P++A ++ F+ LIP Y ++KFLQ Q I +YI T +++ L+++ V+ +W+ +++ Q+ VK W G+ + F KLS VM+ E W F+I+ L+AG L LA + S+ MT + I G S RV+ LGA P+ Sbjct: 87 ILLQTGFIVLSILYLPICLVWWYSKPILIFLHQTPELAEASQKFLRYLIPGGLGYVCFELLKKFLQTQEITRAGSYILLVTSPLNVALNFLLVHYYGLGLKGAPLATGLSYWLSFILLTQYAKYVKG---AEAWNGWNKRCLENFGPFVKLSLLGIVMVGTEWWAFEIVALVAGKLGAVPLA--AQSVIMTTDQLLNTIPFGLGIITSNRVAYYLGAGLPD 302 The following BLAST results are available for this feature:
BLAST of FC930103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930103 ID=FC930103; Name=FC930103; organism=Citrus clementina; type=EST; length=733bpback to top |