FC930210
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930210 vs. ExPASy Swiss-Prot
Match: P2C76_ARATH (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 5.764e-27 Identity = 64/128 (50.00%), Postives = 86/128 (67.19%), Query Frame = 3 Query: 327 MLCNSYIRTVIVRV-VNIGSFTRTRLELSNINKSLHAGLR-----VGY--TWNREFRKSSKMMVDSAA--KRGPIVDVLPEKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSMLMGK 680 M+C+S+IR+ IV+ IG + R + +I K+L G +G+ T FR S+KMMVD++A KR +VD+ PEK DDGGY+ GGWK++DG L CGY SFRGKR+TMEDFYDIK S + G+ Sbjct: 1 MVCSSFIRSFIVQAGCRIGVLAQGRHQFIHIKKTLSVGFGFRTSVIGFRTTSGIGFRTSAKMMVDTSAGEKRISLVDMPPEKVDDGGYIGGGWKNDDGSLSCGYCSFRGKRSTMEDFYDIKASTIEGQ 128 HSP 2 Score: 25.0238 bits (53), Expect = 5.764e-27 Identity = 8/11 (72.73%), Postives = 11/11 (100.00%), Query Frame = 2 Query: 668 VDGQAVCMFGV 700 ++GQAVCMFG+ Sbjct: 125 IEGQAVCMFGI 135
BLAST of FC930210 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 4.347e-15 Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 3 Query: 447 GYTWNREFRKSSKMMVDSAAKRGPIVDVLPEKEDDG------------GYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSMLMGK 680 G++ R R +++MM+DS+ + P++ G GY SGGW EDGKL+CGYSSFRGKRATMEDFYD+K + + G+ Sbjct: 49 GHSGWRGLRVAARMMLDSSDSAAAAGQMQPQQRAAGAVACSAQDGGAAGYASGGWAREDGKLKCGYSSFRGKRATMEDFYDVKLTEIDGQ 138 HSP 2 Score: 21.9422 bits (45), Expect = 4.347e-15 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 668 VDGQAVCMFGV 700 +DGQAV +FGV Sbjct: 135 IDGQAVSLFGV 145
BLAST of FC930210 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 35/48 (72.92%), Postives = 41/48 (85.42%), Query Frame = 3 Query: 537 EKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSMLMGK 680 E+ D+ GY+SGGWKSEDG L CGYSSFRGKRA+MEDFYDIK+S + K Sbjct: 209 ERVDEVGYMSGGWKSEDGFLSCGYSSFRGKRASMEDFYDIKSSKIDDK 256
BLAST of FC930210 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 27/43 (62.79%), Postives = 37/43 (86.05%), Query Frame = 3 Query: 537 EKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTS 665 +++D+ Y+ GGW S+DG++ CGYSSFRG+RA MEDFYDIK+S Sbjct: 95 DEDDEARYICGGWTSDDGRMSCGYSSFRGRRANMEDFYDIKSS 137 The following BLAST results are available for this feature:
BLAST of FC930210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930210 ID=FC930210; Name=FC930210; organism=Citrus clementina; type=EST; length=709bpback to top |