FC930220
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930220 vs. ExPASy Swiss-Prot
Match: RL74_ARATH (60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1) HSP 1 Score: 352.058 bits (902), Expect = 1.617e-96 Identity = 173/209 (82.78%), Postives = 191/209 (91.39%), Query Frame = 3 Query: 54 MAEVEAKAPVPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEAKHFLWPFKL 680 M E E+K VPESVLKK+KR EEWALAKKQELE +KK E RKLI+NRAKQY+KE+ E+E+ LIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSV+ELIYKRG+GKL+ QR ALTDNSI+++ LGK GIIC+EDLIHEIMTVGPHFKEA +FLWPF+L Sbjct: 1 MTEAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQL 209
BLAST of FC930220 vs. ExPASy Swiss-Prot
Match: RL72_ARATH (60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=1 SV=1) HSP 1 Score: 346.665 bits (888), Expect = 6.792e-95 Identity = 171/206 (83.01%), Postives = 189/206 (91.75%), Query Frame = 3 Query: 63 VEAKAPVPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEAKHFLWPFKL 680 VE+K VPESVLKK+KR EEWAL KKQ +E +KK E+RKLI+ RA+QY+KE+AE+EK LI LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNML RVEPYVTYG+PNLKSV+ELIYKRGYGKL+ QRIALTDNSI+E+ALGK GIIC EDLIHEI+TVGPHFKEA +FLWPF+L Sbjct: 2 VESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLWPFQL 207
BLAST of FC930220 vs. ExPASy Swiss-Prot
Match: RL73_ARATH (60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 1.673e-93 Identity = 169/205 (82.44%), Postives = 188/205 (91.71%), Query Frame = 3 Query: 66 EAKAPVPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEAKHFLWPFKL 680 E+K VPESVLKK KR EEWALAKK E +KK +E+RKLI+ RA+QYAKE+AE++ LI+LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSV+ELIYKRGYGKL+ QRIALTDNSI+++ALGK GIIC+EDLIHEIMTVGPHFKEA +FLWPF+L Sbjct: 3 ESKVVVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQL 207
BLAST of FC930220 vs. ExPASy Swiss-Prot
Match: RL7_NEUCR (60S ribosomal protein L7 OS=Neurospora crassa GN=rpl-7 PE=3 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.022e-66 Identity = 124/200 (62.00%), Postives = 158/200 (79.00%), Query Frame = 3 Query: 81 VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEAKHFLWPFKL 680 VPE++LKK+K E+ ++ E+E K E R +I+ RA+ Y KE+ + E+ I+L+R AK G F++ EAKL+F+IRI+GIN I PK +KILQLLRL QI NGVF++V KAT M+ VEP+V YGYPNLKSV+ELIYKRGYGK++KQR+ALTDNSIIE+ LGK+GIICMEDLIHEI TVGP+FK+A +FLWPFKL Sbjct: 13 VPETLLKKRKSQEKARAERQAEIEKKKAANKEKRAVIFKRAETYVKEYRDVEREKIRLQRAAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPRKILQLLRLLQINNGVFVRVTKATAEMIKIVEPWVAYGYPNLKSVKELIYKRGYGKVNKQRVALTDNSIIEENLGKYGIICMEDLIHEIYTVGPNFKQASNFLWPFKL 212
BLAST of FC930220 vs. ExPASy Swiss-Prot
Match: RL7_MOUSE (60S ribosomal protein L7 OS=Mus musculus GN=Rpl7 PE=2 SV=2) HSP 1 Score: 249.21 bits (635), Expect = 1.476e-65 Identity = 126/210 (60.00%), Postives = 158/210 (75.24%), Query Frame = 3 Query: 63 VEAKAPVPESVLKKQKRN----EEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEAKHFLWPFKL 680 ++ K P LKK++RN + L KK L+T +K + RKLIY +AK Y KE+ + + I++ R A+ G FYV E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDNS+I ++LGKFGIICMEDLIHEI TVG FKEA +FLWPFKL Sbjct: 29 LKKKVPAVPETLKKKRRNFAELKVKRLRKKFALKTLRKAR---RKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKL 235
BLAST of FC930220 vs. ExPASy Swiss-Prot
Match: RL7_RAT (60S ribosomal protein L7 OS=Rattus norvegicus GN=Rpl7 PE=1 SV=2) HSP 1 Score: 248.44 bits (633), Expect = 2.517e-65 Identity = 125/207 (60.39%), Postives = 156/207 (75.36%), Query Frame = 3 Query: 72 KAPVPESVLKKQKRN----EEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEAKHFLWPFKL 680 K P LKK++RN + L KK L+T +K + RKLIY +AK Y KE+ + + I++ R A+ G FYV E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDNS++ ++LGKFGIICMEDLIHEI TVG FKEA +FLWPFKL Sbjct: 22 KVPAVPETLKKKRRNFAELKVKRLRKKFALKTLRKAR---RKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLVARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKL 225
BLAST of FC930220 vs. ExPASy Swiss-Prot
Match: RL7_MACFA (60S ribosomal protein L7 OS=Macaca fascicularis GN=RPL7 PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.288e-65 Identity = 122/209 (58.37%), Postives = 158/209 (75.60%), Query Frame = 3 Query: 57 AEVEAKAP-VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEAKHFLWPFKL 680 AE + K P VPE++ KK++ E + + ++ K + RKLIY +AK Y KE+ + + I++ R A+ G FYV E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDN++I ++LGK+GIICMEDLIHEI TVG FKEA +FLWPFKL Sbjct: 4 AEEKKKVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEICTVGKRFKEANNFLWPFKL 212
BLAST of FC930220 vs. ExPASy Swiss-Prot
Match: RL7_YARLI (60S ribosomal protein L7 OS=Yarrowia lipolytica GN=RPL7 PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.294e-65 Identity = 119/200 (59.50%), Postives = 157/200 (78.50%), Query Frame = 3 Query: 81 VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEAKHFLWPFKL 680 VPE++LKK+K ++ AK+ K E K+I++RA++Y KE+ E E+ I+L+REAKL G FYV E KL+F+IRI+GI+ + PK +K+LQLLRL QI NGVF+++ KAT +L VEPY+ +GYPNL SVR+L+YKRGYGK++KQRI L+DN+IIE+ALGK+GIICMEDLIHEI TVGP FK+A +FLWPFKL Sbjct: 14 VPETLLKKRKNADQIRAAKEAAAAEKKAANAEKDKVIFSRAEKYVKEYREAEREQIRLRREAKLNGTFYVPAEPKLVFVIRIKGISKMAPKPRKVLQLLRLHQINNGVFVRITKATAELLRIVEPYIAFGYPNLASVRQLVYKRGYGKVNKQRIPLSDNAIIEEALGKYGIICMEDLIHEIYTVGPAFKQASNFLWPFKL 213
BLAST of FC930220 vs. ExPASy Swiss-Prot
Match: RL7_BOVIN (60S ribosomal protein L7 OS=Bos taurus GN=RPL7 PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.294e-65 Identity = 122/208 (58.65%), Postives = 157/208 (75.48%), Query Frame = 3 Query: 60 EVEAKAP-VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEAKHFLWPFKL 680 E + K P VPE++ KK+K E + + ++ K + RKLIY +AK Y KE+ + + I++ R A+ G FYV E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDN++I ++LGK+GIICMEDLIHEI TVG FKEA +FLWPFKL Sbjct: 6 EKKKKVPAVPETLKKKRKNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKL 213
BLAST of FC930220 vs. ExPASy Swiss-Prot
Match: RL7_PONAB (60S ribosomal protein L7 OS=Pongo abelii GN=RPL7 PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 9.566e-65 Identity = 121/208 (58.17%), Postives = 157/208 (75.48%), Query Frame = 3 Query: 60 EVEAKAP-VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEAKHFLWPFKL 680 E + K P VPE++ KK++ E + + ++ K + RKLIY +AK Y KE+ + + I++ R A+ G FYV E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDN++I ++LGK+GIICMEDLIHEI TVG FKEA +FLWPFKL Sbjct: 5 EEKKKVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKL 212 The following BLAST results are available for this feature:
BLAST of FC930220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930220 ID=FC930220; Name=FC930220; organism=Citrus clementina; type=EST; length=682bpback to top |