FC930267

Overview
NameFC930267
Unique NameFC930267
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10359 contig Ccv1_Contig10359:2..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.640e-59
Identity = 104/125 (83.20%), Postives = 107/125 (85.60%), Query Frame = 2
Query:  311 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            MGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCF RT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYAR
Sbjct:   91 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFSRTIKDEGFAALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGGAGASSLLFVYSLDYAR 215          

HSP 2 Score: 35.4242 bits (80), Expect = 1.640e-59
Identity = 24/80 (30.00%), Postives = 40/80 (50.00%), Query Frame = 3
Query:   63 ADGSYPSVFQKMQGQSYFISGVSPNLYAHNYSVA-----------GSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAP 269
            AD  +P+V+QK+  Q +  S +S +++A    +            G++ N G Q     A+Q   L + +  SP+FVQAP
Sbjct:    1 ADNQHPTVYQKVASQMHLSSSLSQDVHARYGGIQRPALSQRRFPYGNYSNAGLQTC--QATQDLSL-IAANASPVFVQAP 77          
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.051e-58
Identity = 103/125 (82.40%), Postives = 108/125 (86.40%), Query Frame = 2
Query:  311 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            MGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRLS PYKGI +CFGRT+K+EG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYAR
Sbjct:   92 MGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLSEPYKGIGECFGRTIKEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYAR 216          

HSP 2 Score: 34.2686 bits (77), Expect = 1.051e-58
Identity = 29/82 (35.37%), Postives = 40/82 (48.78%), Query Frame = 3
Query:   60 MAD-GSYPSVFQKMQGQSYFIS-----------GVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAP 269
            MAD   +P+VFQK   Q    S           GV P +Y  +++  G++ N G Q     A+Q   L + S  SP+FVQAP
Sbjct:    1 MADMNQHPTVFQKAANQLDLRSSLSQDVHARYGGVQPAIYQRHFAY-GNYSNAGLQRG--QATQDLSL-ITSNASPVFVQAP 78          
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.944e-57
Identity = 102/125 (81.60%), Postives = 108/125 (86.40%), Query Frame = 2
Query:  311 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            MGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRL+ PYKGI DCFGRT++DEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD+DGYWKWFAGN             FVYSLDYAR
Sbjct:   90 MGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLTEPYKGIRDCFGRTIRDEGIGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYAR 214          

HSP 2 Score: 30.4166 bits (67), Expect = 1.944e-57
Identity = 22/76 (28.95%), Postives = 34/76 (44.74%), Query Frame = 3
Query:   75 YPSVFQKMQGQ-----------SYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAP 269
            +P++ QK+ GQ            Y  +   P  Y   ++  G++ N   Q    AASQ     + +  SP+FVQAP
Sbjct:    7 HPTILQKVSGQLLSSSVSQDIRGYASASKRPATY-QKHAAYGNYSNAAFQYPLVAASQ-----IATTTSPVFVQAP 76          
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 5.616e-57
Identity = 106/125 (84.80%), Postives = 108/125 (86.40%), Query Frame = 2
Query:  311 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            MGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYAR
Sbjct:   86 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYAR 210          

HSP 2 Score: 24.6386 bits (52), Expect = 5.616e-57
Identity = 21/74 (28.38%), Postives = 33/74 (44.59%), Query Frame = 3
Query:   75 YPSVFQKMQGQSYFISGVS---------PNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAP 269
            +P++ QK  GQ +  S VS         P++Y   ++  G++ N   Q         T   L +  SP+FVQ P
Sbjct:    7 HPTIAQKAAGQ-FMRSSVSKDVQVGYQRPSMY-QRHATYGNYSNAAFQ------FPPTSRMLATTASPVFVQTP 72          
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT2_MAIZE (ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 6.600e-56
Identity = 106/125 (84.80%), Postives = 108/125 (86.40%), Query Frame = 2
Query:  311 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLS PYKGI+DCF RT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYAR
Sbjct:   93 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIADCFKRTIKDEGFSSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYAR 217          
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT_ORYSJ (ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.126e-55
Identity = 104/125 (83.20%), Postives = 107/125 (85.60%), Query Frame = 2
Query:  311 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            MGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD+DGYWKWF GN             FVYSLDYAR
Sbjct:   88 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYAR 212          
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 216.083 bits (549), Expect = 1.470e-55
Identity = 106/125 (84.80%), Postives = 107/125 (85.60%), Query Frame = 2
Query:  311 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLS PYKGI DCF RT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYAR
Sbjct:   93 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIVDCFKRTIKDEGFSSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYAR 217          
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.470e-55
Identity = 106/125 (84.80%), Postives = 107/125 (85.60%), Query Frame = 2
Query:  311 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLS PYKGI DCF RT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYAR
Sbjct:   92 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYAR 216          
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT1_WHEAT (ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.278e-55
Identity = 103/125 (82.40%), Postives = 107/125 (85.60%), Query Frame = 2
Query:  311 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            MGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKR+FNFKKD+DGYWKWF GN             FVYSLDYAR
Sbjct:   37 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRMFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYAR 161          
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT2_WHEAT (ADP,ATP carrier protein 2, mitochondrial OS=Triticum aestivum GN=ANT-G2 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.245e-54
Identity = 102/125 (81.60%), Postives = 106/125 (84.80%), Query Frame = 2
Query:  311 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            MGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKR+FNFKKD+DGYWKWF GN             FVYSLDY R
Sbjct:   37 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRMFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYGR 161          
The following BLAST results are available for this feature:
BLAST of FC930267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ADT2_SOLTU1.640e-5983.20ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT1_SOLTU1.051e-5882.40ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT2_ARATH1.944e-5781.60ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
ADT1_ARATH5.616e-5784.80ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT2_MAIZE6.600e-5684.80ADP,ATP carrier protein 2, mitochondrial OS=Zea ma... [more]
ADT_ORYSJ1.126e-5583.20ADP,ATP carrier protein, mitochondrial OS=Oryza sa... [more]
ADT1_MAIZE1.470e-5584.80ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
ADT1_GOSHI1.470e-5584.80ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT1_WHEAT4.278e-5582.40ADP,ATP carrier protein 1, mitochondrial OS=Tritic... [more]
ADT2_WHEAT1.245e-5481.60ADP,ATP carrier protein 2, mitochondrial OS=Tritic... [more]

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Properties
Property NameValue
Genbank descriptionC34005F01EF PostHarvC1 Citrus clementina cDNA clone C34005F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930267 ID=FC930267; Name=FC930267; organism=Citrus clementina; type=EST; length=702bp
GACATTACGGAGGTCTCACACTAGGCGACCTTCTCAGGTCACCATCTTCA
GCTGCAAACATGGCAGATGGATCGTATCCATCCGTATTTCAGAAAATGCA
AGGCCAGTCATACTTCATTTCTGGGGTCTCCCCCAATTTGTATGCCCACA
ACTACAGTGTGGCAGGTTCCTTTGTTAATAGAGGATCACAGAATTCTTTT
TGGGCAGCAAGTCAGGGAACTGGCCTGGCACTTGTGTCTCCTGTTTCTCC
TATATTCGTACAAGCTCCATCAGAAAAAAAGTCTTTCTTCTTTTTTTGGT
GGATTTTCTCATGGGAGGAGTTTCAGCAGCTGTTTCCAAGACTGCAGCTG
CTCCTATTGAGCGGGTTAAGCTTTTGATTCAGAATCAAGATGAGATGATC
AAGAGTGGTCGGCTCTCGCATCCGTACAAGGGGATTTCTGATTGCTTTGG
TAGAACTGTTAAGGATGAAGGCACACTATCTCTTTGGAGAGGCAACACTG
CCAATGTTATCAGATACTTCCCTACCCAGGCCCTGAACTTTGCATTCAAG
GATTACTTTAAGAGGCTGTTTAACTTCAAGAAAGACAGAGATGGCTACTG
GAAGTGGTTTGCTGGGAACTTGGCATCTGGTGGGGCTGCTGGTGCTTCAT
CGCTTCTTTTTGTGTATTCGCTTGACTATGCAAGACACGTTTGGCAATGA
TG
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