FC930371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930371 vs. ExPASy Swiss-Prot
Match: WOX8_ORYSJ (WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica GN=WOX8 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.810e-53 Identity = 107/168 (63.69%), Postives = 132/168 (78.57%), Query Frame = 2 Query: 167 DGGDTSNGL-CVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNE-IAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSL 664 D G GL VKVMTDEQME+LRKQI++YA ICEQLV+MH+ +AQ + IAGMR+GN Y DP + G K+TARQRWTPTP QLQILE+++D+ GTP KQKI+D+TAEL++HGQISETNVYNWFQNRRAR KRKQ+ + NNAESEAE + + K+ P+S + L Sbjct: 16 DRGGGEGGLGYVKVMTDEQMEVLRKQISIYATICEQLVEMHRALTAQQDSIAGMRLGNLYCDPLMVPGGHKITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQAALPNNNAESEAEADEESPTDKK-PKSDRPL 182
BLAST of FC930371 vs. ExPASy Swiss-Prot
Match: WOX13_ARATH (WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana GN=WOX13 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.435e-51 Identity = 105/188 (55.85%), Postives = 126/188 (67.02%), Query Frame = 2 Query: 122 PNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSG---VVPNNAESEAETVTHA--ESRKQNPESIQSLED 670 PN ++ G G+ VKVMTDEQ E LRKQIA+Y ICE+LV+MHK +AQ ++AG RMG Y DP ++S K+TARQRWTPTP QLQILE ++D+ GTP KQKI+D+T EL++HGQI+E NVYNWFQNRRAR KRKQ G NN ESE ET A E R PES+ L D Sbjct: 10 PNNHHSSNLQGIDVNGGSGAGGGMYVKVMTDEQYETLRKQIAIYGTICERLVEMHKTLTAQQDLAGGRMGGLYADPMMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRKQHGGGSSGNNNGESEVETEVEALNEKRVVRPESLLGLPD 197
BLAST of FC930371 vs. ExPASy Swiss-Prot
Match: WOX14_ARATH (WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana GN=WOX14 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.777e-39 Identity = 85/167 (50.90%), Postives = 115/167 (68.86%), Query Frame = 2 Query: 143 EMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIA-GMR-MGNPYFDPFVASGSQ-KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESR 634 EM+R+ Q + +VMT+EQME+LRKQIAVYA+IC+QLV +H S+ + ++ G+R M YFDP AS S +++ R RWTPT QLQILE +YDE GTP +++I+++ EL++HGQI+ETNVYNWFQNRRAR KRKQ N +++ VT E R Sbjct: 16 EMDREIQ------NGAYSGRVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGASSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRKQPQTTTANGQADDVAVTTEERR 176
BLAST of FC930371 vs. ExPASy Swiss-Prot
Match: WOX10_ARATH (Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana GN=WOX10 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.887e-35 Identity = 79/151 (52.32%), Postives = 104/151 (68.87%), Query Frame = 2 Query: 200 KVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIA-GMR-MGNPYFDPFVASGSQK-LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ---SGVVPNNAESEAETVTHAESR 634 +VMTDEQME LRKQIA+YA++C+QLV +H S+ ++ GM M YFDP VAS S ++ R RWTPT QLQILE++Y E GTP ++I+++T EL++HGQI E NVY+WFQNRRAR KRKQ + + + A+ A T T R Sbjct: 13 RVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAHGMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRRARSKRKQPPTTTITSSQADDAAVTTTEERGR 163
BLAST of FC930371 vs. ExPASy Swiss-Prot
Match: WOX5_ORYSJ (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica GN=WOX5 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 2 Query: 356 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 571 AS + A RWTPT Q+ +LE +Y + TP ++IQ +TA L +HG I NV+ WFQN +AR ++KQ Sbjct: 33 ASAAAAALANARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQ 104
BLAST of FC930371 vs. ExPASy Swiss-Prot
Match: WOX5_ORYSI (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica GN=WOX5 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 2 Query: 356 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 571 AS + A RWTPT Q+ +LE +Y + TP ++IQ +TA L +HG I NV+ WFQN +AR ++KQ Sbjct: 33 ASAAAAALANARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQ 104 The following BLAST results are available for this feature:
BLAST of FC930371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930371 ID=FC930371; Name=FC930371; organism=Citrus clementina; type=EST; length=672bpback to top |