FC930386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930386 vs. ExPASy Swiss-Prot
Match: CO058_MOUSE (UPF0580 protein C15orf58 homolog OS=Mus musculus PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.184e-28 Identity = 67/173 (38.73%), Postives = 102/173 (58.96%), Query Frame = 3 Query: 207 PVAFLDSLVLGEWEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLH 725 P++ DS + W R++ GLFRY + +T+++PG GF+AQLN R +++R + + V Q FD +FNF K+ EVLF+ + G P+ P + +V INVSP+E+GHVLL+P + LPQR+ + L + +P FR+G+NSLG A++NHLH Sbjct: 55 PLSRFDSALRSAWRQRLELGLFRYRLEDLQTQILPGSVGFVAQLNIERGIQRRRPQ-NIRSVRQEFDPEQFNFNKIRPGEVLFRMQREPKG-----PATP--KQEDDVLVVINVSPLEWGHVLLVPAPAQGLPQRLLPGVLRVGLEAVLLSLHPGFRVGFNSLGGLASVNHLH 219
BLAST of FC930386 vs. ExPASy Swiss-Prot
Match: CO058_BOVIN (UPF0580 protein C15orf58 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27 Identity = 65/174 (37.36%), Postives = 98/174 (56.32%), Query Frame = 3 Query: 204 PPVAFLDSLVLGEWEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLH 725 PP++ DS + W R++ GLFRY + T+ +PG GF+AQLN R +++R + + V Q FD +FNF ++ EVLF+ +D V+ +V INVSP+E+GHVLL+P LPQR+ + + + +P FR+G+NSLG A++NHLH Sbjct: 54 PPLSHFDSALCSAWRQRMELGLFRYPLGELPTQTLPGTVGFVAQLNVERGVQRRCPQ-NIKSVRQEFDPEQFNFNQIRPGEVLFRLHRKQD--------CSGTVQQEDILVVINVSPLEWGHVLLVPEPARGLPQRLLPGALRAGVEAVLLSSHPGFRVGFNSLGGLASVNHLH 218
BLAST of FC930386 vs. ExPASy Swiss-Prot
Match: CO058_XENTR (UPF0580 protein C15orf58 homolog OS=Xenopus tropicalis PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.378e-27 Identity = 73/230 (31.74%), Postives = 118/230 (51.30%), Query Frame = 3 Query: 123 LPLYAFKRVNKFKTEMGVHG------HEVREPEPPVAFLDSLVLGEWEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASE-DGEVQFH----------------------PSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLH 725 LP + N F+ + G E E ++ D + +WE+++ GLFRY + +T+++PG ++AQLN R + +R E + V Q F+ N+FN+ K+ EE++FQ SE + V H S ++ ++S ++V INVSP+E+GHVL +P CLPQ + + L + + +P FR+G+NSLG FA++NHLH Sbjct: 8 LPNATVEEYNYFEEDFVFQGLSWKKRQEFAEDTSFLSPFDKALQSKWEEKMNEGLFRYPLRNVQTKILPGSVSYVAQLNIQRSINRRKPE-DIWSVQQKFNPNQFNYNKIKSEEIVFQMIRSEAEHSVDSHIVQGSMVNGMGSSECKSGSTPQGSCTLECKSSCTLVVINVSPLEFGHVLFMPDPSLCLPQILTENLMLFGMESVFLSSHPGFRVGFNSLGGFASVNHLH 236
BLAST of FC930386 vs. ExPASy Swiss-Prot
Match: CO058_HUMAN (UPF0580 protein C15orf58 OS=Homo sapiens GN=C15orf58 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.378e-27 Identity = 66/173 (38.15%), Postives = 99/173 (57.23%), Query Frame = 3 Query: 207 PVAFLDSLVLGEWEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLH 725 P + D+ + W+ RV+ GLFRY + +T+++PG GF+AQLN R +++RP + + V Q FD +FNF K+ EVLF+ P P + +V INVSP+E+GHVLL+P LPQR+ + + + +P FR+G+NSLG A++NHLH Sbjct: 55 PQSPFDAALCSAWKQRVELGLFRYRLRELQTQILPGAVGFVAQLNVERGVQRRPPQ-TIKSVRQAFDPVQFNFNKIRPGEVLFRLHR--------EPDLPGTLLQEDILVVINVSPLEWGHVLLVPEPARQLPQRLLPGALRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLH 218
BLAST of FC930386 vs. ExPASy Swiss-Prot
Match: CO058_XENLA (UPF0580 protein C15orf58 homolog OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.235e-27 Identity = 70/211 (33.18%), Postives = 111/211 (52.61%), Query Frame = 3 Query: 171 GVHGHEVREPEPPVAFL---DSLVLGEWEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASEDGEV----QFHPSAP-------------------IDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLH 725 G+ E R+ +FL D + +WE ++ GLFRY + +T+++PG ++AQLN R + +R E + + Q F+ N+FN+ K+ EE++FQ SE + H S+ ++ + ++V INVSP+E+GHVL +P CLPQ + D L L + +P FR+G+NSLG FA++NHLH Sbjct: 28 GLSWKERRQYAEDTSFLSPFDKALQSKWEQKMNEGLFRYPLRNLQTKILPGSLSYVAQLNIQRSINRRKPE-DIWSIQQKFNPNQFNYNKIKPEEIVFQMIRSETEHCVDSDKVHGSSVNGMGTSDCKSGSTHQRCCILECKGGCTLVVINVSPLEFGHVLFMPDPSLCLPQILTEDLMLFGLESVLLSAHPGFRVGFNSLGGFASVNHLH 237
BLAST of FC930386 vs. ExPASy Swiss-Prot
Match: CO058_MACFA (UPF0580 protein C15orf58 homolog OS=Macaca fascicularis GN=QflA-20034 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.989e-26 Identity = 64/173 (36.99%), Postives = 98/173 (56.65%), Query Frame = 3 Query: 207 PVAFLDSLVLGEWEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLH 725 P + D+ + W+ RV+ GLFRY + +T+++PG GF+AQLN R +++R + + V Q FD +FNF K+ EVL++ P P + +V INVSP+E+GHVLL+P LPQR+ + + + +P FR+G+NSLG A++NHLH Sbjct: 55 PQSPFDAALCSAWKQRVELGLFRYRLRELQTQILPGVVGFVAQLNVERGVQRRRPQ-TIKSVRQAFDPEQFNFNKIQPGEVLYRLHR--------EPDLPGTLLQEDILVVINVSPLEWGHVLLVPEPARGLPQRLLPGALRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLH 218
BLAST of FC930386 vs. ExPASy Swiss-Prot
Match: CO058_DANRE (UPF0580 protein C15orf58 homolog OS=Danio rerio GN=zgc:153343 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.862e-24 Identity = 59/161 (36.65%), Postives = 90/161 (55.90%), Query Frame = 3 Query: 243 WEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLH 725 W ++ GLFRY + ETR++PG G+IAQLN R ++R + + V Q FD +FNF K+ +E+LF+ + + + V INVSP+E+GH LL+P +C PQ + + + + +P FR+G+NSLG FA++NHLH Sbjct: 39 WTEKRNTGLFRYRLDELETRILPGSRGYIAQLNIMRGTERRKPQ-EILSVRQNFDPKQFNFNKINPKELLFELKRESERKCS---------------VIINVSPLEFGHCLLVPEPEKCFPQVLTHLAVQTGIETVLLSADPGFRVGFNSLGGFASVNHLH 183 The following BLAST results are available for this feature:
BLAST of FC930386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930386 ID=FC930386; Name=FC930386; organism=Citrus clementina; type=EST; length=728bpback to top |