FC930546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SC61A_PYRSA (Protein transport protein Sec61 subunit alpha OS=Pyrenomonas salina PE=2 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 9.262e-77 Identity = 141/195 (72.31%), Postives = 167/195 (85.64%), Query Frame = 2 Query: 137 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 G R L LV+PF+ LPEV SA +KIP EK+++T I +F++LVC Q+PLYGI +T +DPFYWMRVILASN+GT+MELGI+PIVTSGLVMQLLAGSKII+VD +ED+ L GAQKLLGILI IGE+VAYV+SGMYG V LGAGNAILII+QL +GIIVICLDELLQKGYG+GS ISLFIATN+CESI+WK+ Sbjct: 5 GVRFLTLVKPFMFALPEVSSATKKIPVNEKLLWTSIVVFLYLVCCQIPLYGITNTKSSDPFYWMRVILASNKGTLMELGISPIVTSGLVMQLLAGSKIIDVDQGTKEDKTLFQGAQKLLGILITIGESVAYVLSGMYGDVKDLGAGNAILIIVQLFTSGIIVICLDELLQKGYGIGSAISLFIATNVCESIVWKS 199
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SC61A_DICDI (Protein transport protein Sec61 subunit alpha OS=Dictyostelium discoideum GN=sec61a PE=3 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.132e-74 Identity = 134/194 (69.07%), Postives = 162/194 (83.51%), Query Frame = 2 Query: 137 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWK 718 GFR L +V+PF +PEV DRKIPFREKV++T I LFIFLVCSQ+PLYGI ST +DPFYW +VI+ASNRGT+MELGI+PIVTSG+VMQLLAG+K+IE+D +V+ DR L + AQKL G+LI +G+ VAY+ SG YG + LG GN LI+LQL FAGIIV+ LDELLQKGYG+GSGISLFIATNICE+I+WK Sbjct: 2 GFRFLDIVKPFTSLVPEVGQPDRKIPFREKVLWTAICLFIFLVCSQIPLYGIRSTDSSDPFYWAKVIMASNRGTLMELGISPIVTSGMVMQLLAGAKLIEIDQSVKADRDLFSAAQKLFGMLICVGQGVAYIWSGSYGDPAVLGFGNCFLIVLQLFFAGIIVMLLDELLQKGYGIGSGISLFIATNICETIVWK 195
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SC61A_HARAN (Protein transport protein Sec61 subunit alpha OS=Harpagifer antarcticus GN=sec61a PE=2 SV=3) HSP 1 Score: 276.944 bits (707), Expect = 7.339e-74 Identity = 135/195 (69.23%), Postives = 166/195 (85.13%), Query Frame = 2 Query: 137 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKA Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SC61A_DISMA (Protein transport protein Sec61 subunit alpha OS=Dissostichus mawsoni GN=sec61a PE=2 SV=3) HSP 1 Score: 276.944 bits (707), Expect = 7.339e-74 Identity = 135/195 (69.23%), Postives = 166/195 (85.13%), Query Frame = 2 Query: 137 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKA Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SC61A_PAGBO (Protein transport protein Sec61 subunit alpha OS=Pagothenia borchgrevinki GN=sec61a PE=2 SV=3) HSP 1 Score: 276.559 bits (706), Expect = 9.585e-74 Identity = 135/195 (69.23%), Postives = 165/195 (84.62%), Query Frame = 2 Query: 137 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 G + L ++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKA Sbjct: 2 GIKFLEFIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SC61A_NOTAN (Protein transport protein Sec61 subunit alpha OS=Notothenia angustata GN=sec61a PE=2 SV=3) HSP 1 Score: 276.559 bits (706), Expect = 9.585e-74 Identity = 135/195 (69.23%), Postives = 165/195 (84.62%), Query Frame = 2 Query: 137 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 G + L ++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKA Sbjct: 2 GIKFLEFIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SC61A_BOVVA (Protein transport protein Sec61 subunit alpha OS=Bovichtus variegatus GN=sec61a PE=2 SV=3) HSP 1 Score: 276.174 bits (705), Expect = 1.252e-73 Identity = 135/195 (69.23%), Postives = 164/195 (84.10%), Query Frame = 2 Query: 137 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 G + L ++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKA Sbjct: 2 GIKFLEFIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGIAPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: S61A2_ONCMY (Protein transport protein Sec61 subunit alpha isoform B OS=Oncorhynchus mykiss GN=sec61ab PE=2 SV=3) HSP 1 Score: 276.174 bits (705), Expect = 1.252e-73 Identity = 135/195 (69.23%), Postives = 165/195 (84.62%), Query Frame = 2 Query: 137 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG S +GAG +LII+QL AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKA Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSDMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: SC61A_GADOC (Protein transport protein Sec61 subunit alpha OS=Gadus ogac GN=sec61a PE=2 SV=3) HSP 1 Score: 275.789 bits (704), Expect = 1.635e-73 Identity = 134/195 (68.72%), Postives = 166/195 (85.13%), Query Frame = 2 Query: 137 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG S++GAG ++II+QL AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKA Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLVIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195
BLAST of FC930546 vs. ExPASy Swiss-Prot
Match: S61A2_PONAB (Protein transport protein Sec61 subunit alpha isoform 2 OS=Pongo abelii GN=SEC61A2 PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.635e-73 Identity = 134/195 (68.72%), Postives = 166/195 (85.13%), Query Frame = 2 Query: 137 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKA 721 G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + +DRAL NGAQKL G++I IG+A+ YVM+GMYG +++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKA Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195 The following BLAST results are available for this feature:
BLAST of FC930546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930546 ID=FC930546; Name=FC930546; organism=Citrus clementina; type=EST; length=722bpback to top |