FC930593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930593 vs. ExPASy Swiss-Prot
Match: SFRS2_RAT (Splicing factor, arginine/serine-rich 2 OS=Rattus norvegicus GN=Sfrs2 PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 122 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIQKG 424 +GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ ++G Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
BLAST of FC930593 vs. ExPASy Swiss-Prot
Match: SFRS2_PIG (Splicing factor, arginine/serine-rich 2 OS=Sus scrofa GN=SFRS2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 122 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIQKG 424 +GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ ++G Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
BLAST of FC930593 vs. ExPASy Swiss-Prot
Match: SFRS2_PANTR (Splicing factor, arginine/serine-rich 2 OS=Pan troglodytes GN=SFRS2 PE=2 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 122 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIQKG 424 +GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ ++G Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
BLAST of FC930593 vs. ExPASy Swiss-Prot
Match: SFRS2_MOUSE (Splicing factor, arginine/serine-rich 2 OS=Mus musculus GN=Sfrs2 PE=1 SV=4) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 122 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIQKG 424 +GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ ++G Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
BLAST of FC930593 vs. ExPASy Swiss-Prot
Match: SFRS2_HUMAN (Splicing factor, arginine/serine-rich 2 OS=Homo sapiens GN=SFRS2 PE=1 SV=4) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 122 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIQKG 424 +GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ ++G Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
BLAST of FC930593 vs. ExPASy Swiss-Prot
Match: SFRS2_CHICK (Splicing factor, arginine/serine-rich 2 OS=Gallus gallus GN=SFRS2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 122 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIQKG 424 +GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ ++G Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
BLAST of FC930593 vs. ExPASy Swiss-Prot
Match: SFRS2_BOVIN (Splicing factor, arginine/serine-rich 2 OS=Bos taurus GN=SFRS2 PE=2 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 122 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIQKG 424 +GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ ++G Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
BLAST of FC930593 vs. ExPASy Swiss-Prot
Match: RSP4_CAEEL (Probable splicing factor, arginine/serine-rich 4 OS=Caenorhabditis elegans GN=rsp-4 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17 Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = 2 Query: 128 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG-PNAERIQKG 424 R PDI SL + N++++TT +DL F++YG + D+ IPRD+ + S+GF FVR+ +A+ A+DR DG++VDGRE+ V AKY P+ ER +G Sbjct: 9 RRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDRPSDERGGRG 108
BLAST of FC930593 vs. ExPASy Swiss-Prot
Match: SFR2B_HUMAN (Splicing factor, arginine/serine-rich 2B OS=Homo sapiens GN=SFRS2B PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16 Identity = 42/87 (48.28%), Postives = 59/87 (67.82%), Query Frame = 2 Query: 137 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 397 PPD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+ +AQ A +DG +DGRE+ VQ A+YG Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYG 93 The following BLAST results are available for this feature:
BLAST of FC930593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930593 ID=FC930593; Name=FC930593; organism=Citrus clementina; type=EST; length=706bpback to top |