FC930608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930608 vs. ExPASy Swiss-Prot
Match: BI1L_ARATH (BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 9.175e-78 Identity = 155/242 (64.05%), Postives = 174/242 (71.90%), Query Frame = 1 Query: 46 KMLGYETVR----SKDDGKFEVDLEGGDGER-LYPGLSYGENQLRWGFIRKVYGILTAQIVLTTLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNL 756 K GY +V + GK ++DLE G GE LYPGLSYGENQLRWGFIRKVYGIL+AQ++LTTL+S++ VL P+ND H+YHQKHPVNLI+L LFTVSLS V VSCA T+GRIVL+ALILT +VV SLT YTFWA+KKGKDFSFLGP +QMFFPLG TS AVYGG SALVFCGYIVYDTDNLIKRFTYD+YILASV LYLDILNL Sbjct: 3 KPYGYASVSMSGIDRSAGK-DIDLEMGVGEATLYPGLSYGENQLRWGFIRKVYGILSAQLLLTTLISAVVVLNPPVNDLLTGSPGILLFLCIVPFILIWPLHIYHQKHPVNLILLALFTVSLSFTVGVSCAMTEGRIVLQALILTLSVVGSLTAYTFWAAKKGKDFSFLGPILFTSLIILVVTSFIQMFFPLGPTSVAVYGGFSALVFCGYIVYDTDNLIKRFTYDEYILASVALYLDILNL 243
BLAST of FC930608 vs. ExPASy Swiss-Prot
Match: TMBI4_MOUSE (Transmembrane BAX inhibitor motif-containing protein 4 OS=Mus musculus GN=Tmbim4 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.472e-24 Identity = 63/199 (31.66%), Postives = 105/199 (52.76%), Query Frame = 1 Query: 160 LRWGFIRKVYGILTAQIVLTTLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNL 756 +R F+RKVY IL+ Q++LTT+ S++ + + + ++ HP+NL +L FT+S SL VA D +VL+A I+T+AV LT YT + + DF+ G +++FF T V + AL+FCG+I+YDT +L+ R + ++Y++A+++LY+DI+NL Sbjct: 30 IRMAFLRKVYSILSLQVLLTTVTSALFLYFQALRTFVHESPALIVVFALGSLGLIFALTLHRHTHPLNLYLLFAFTLSESLAVAAVVTFYDVYLVLQAFIMTTAVFLGLTAYTLQSKR---DFTKFGAGLFAGLWILCLAGFLKLFF-YSETMELVLASLGALLFCGFIIYDTHSLMHRLSPEEYVIAAISLYMDIINL 224
BLAST of FC930608 vs. ExPASy Swiss-Prot
Match: TMBI4_HUMAN (Transmembrane BAX inhibitor motif-containing protein 4 OS=Homo sapiens GN=TMBIM4 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.140e-22 Identity = 64/199 (32.16%), Postives = 101/199 (50.75%), Query Frame = 1 Query: 160 LRWGFIRKVYGILTAQIVLTTLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNL 756 +R F+RKVY IL+ Q++LTT+ S++ + + + + K+P+NL +L FT+ +L VAV D I+L+A ILT+ V LT YT + K DFS G ++ FF V AL+FCG+I+YDT +L+ + + ++Y+LA+++LYLDI+NL Sbjct: 30 IRMAFLRKVYSILSLQVLLTTVTSTVFLYFESVRTFVHESPALILLFALGSLGLIFALTLNRHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTTTVFFGLTVYTLQSKK---DFSKFGAGLFALLWILCLSGFLKFFF-YSEIMELVLAAAGALLFCGFIIYDTHSLMHKLSPEEYVLAAISLYLDIINL 224
BLAST of FC930608 vs. ExPASy Swiss-Prot
Match: YQE4_SCHPO (Uncharacterized membrane protein C576.04 OS=Schizosaccharomyces pombe GN=SPCC576.04 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.317e-19 Identity = 61/199 (30.65%), Postives = 93/199 (46.73%), Query Frame = 1 Query: 160 LRWGFIRKVYGILTAQIVLTTLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNL 756 +R F+RKVY ILTAQ+ +T+L I L+ + + +P N I L LFT L + + RI+LEA+ +T V +LT +TF + DFS LG + F P + G LVFCGYI++DT N++ R++ +++I++S+ LYLD +NL Sbjct: 54 IRMAFLRKVYAILTAQLFVTSLFGGIFYLHPAFSFWVQMHPWFLILNFFISLVVLFGLIMKPYSYPRNYIFLFLFTALEGLTLGTAITFFSARIILEAVFITLGVFVALTAFTFQSKW---DFSRLGGFLYVSLWSLILTPLIFFFVPSTPFIDMAFAGFGTLVFCGYILFDTYNILHRYSPEEFIMSSLMLYLDFINL 249
BLAST of FC930608 vs. ExPASy Swiss-Prot
Match: TMBI4_CAEEL (Transmembrane BAX inhibitor motif-containing protein 4 OS=Caenorhabditis elegans GN=tmbi-4 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.956e-15 Identity = 60/215 (27.91%), Postives = 94/215 (43.72%), Query Frame = 1 Query: 115 DGERLYPG-LSYGENQLRWGFIRKVYGILTAQIVLTTLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNL 756 D + + PG + +R F+RKV GI+ Q++ T + + N HVY ++ P+N ++L FT ++ + + ++VLEA ++T VV SL YT + +DFS QMFF + V A +FC +V D D ++ RF+ +DYI A V+LY+DILNL Sbjct: 53 DADGILPGCVGKANRMIRIAFLRKVLGIVGFQLLFTIGICAAIYNIPNSNQLLQKHAWIVFPNLLGSIALIIALHVYAREVPLNYVLLAAFTAVQAVTMGCVVTLFEAKVVLEAAVITGLVVASLFAYTL---QNKRDFSVGYASMGSLLCVLLWAGIFQMFF-MSPAVNFVINVFGAGLFCVLLVIDLDMIMYRFSPEDYICACVSLYMDILNL 263 The following BLAST results are available for this feature:
BLAST of FC930608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930608 ID=FC930608; Name=FC930608; organism=Citrus clementina; type=EST; length=758bpback to top |