FC930673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930673 vs. ExPASy Swiss-Prot
Match: LCMT2_MOUSE (Leucine carboxyl methyltransferase 2 OS=Mus musculus GN=Lcmt2 PE=2 SV=3) HSP 1 Score: 105.145 bits (261), Expect = 2.535e-25 Identity = 69/176 (39.20%), Postives = 101/176 (57.39%), Query Frame = 2 Query: 113 QSNKAAVQATNDDASASKLSCVKKGYMKDDYIHLFVRRPVRRSPIINRGYFARWAALRRLLYQFLDCGSDGDKKCHTKKQILSLGAGFDTTYFQLQAEGKAPHLYV-ELDFIEVTSKKAALIETHGELKDKVG---VTASISQAKGEVLGDNYKLLPVDLRDIQMLNEVINLANMD 628 Q VQ+TND +S SK S GY++D + L V PVRR+P+I+RGY+ R A+R + FL+ S + T+ QILSLG+G D+ YF+L+A G V E+DF +V+ KA IE EL+ + G + S S E +Y++L DLR++Q L E ++ A +D Sbjct: 7 QRRAGTVQSTNDSSSLSKRSLAAHGYVRDPFAALLVPGPVRRTPLIHRGYYVRARAVRHCVRAFLELTSALPSR--TRAQILSLGSGSDSLYFRLKAAGLLARAAVWEVDFPDVSRLKAKRIEETPELRAQTGPFKIGDSASSLCFE--SADYRILGADLRELQRLGEALHGAGLD 178 HSP 2 Score: 31.187 bits (69), Expect = 2.535e-25 Identity = 11/25 (44.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 627 IQECVLIYLDPDSSRAIVGWASKHF 701 + E VL YL+P S+ A++ WA++ F Sbjct: 186 LAEAVLTYLEPSSATALIAWAAQRF 210
BLAST of FC930673 vs. ExPASy Swiss-Prot
Match: LCMT2_RAT (Leucine carboxyl methyltransferase 2 OS=Rattus norvegicus GN=Lcmt2 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.715e-23 Identity = 69/178 (38.76%), Postives = 100/178 (56.18%), Query Frame = 2 Query: 113 QSNKAAVQATNDDASASKLSCVKKGYMKDDYIHLFVRRPVRRSPIINRGYFARWAALRRLLYQFLDCGSDGDKKCHTKKQILSLGAGFDTTYFQLQAEGKAPHLYV-ELDFIEVTSKKAALIETHGEL-----KDKVGVTASISQAKGEVLGDNYKLLPVDLRDIQMLNEVINLANMD 628 Q VQ+TND +S SK S +GY+ D + L V VRR+P+I+RGY+ R A+R + FLD G + T+ QILSLG+G D+ YF+L+A G V E+DF +V+ KA IE EL K+G +AS + +Y++L DLR++Q L E ++ A +D Sbjct: 7 QRRTGTVQSTNDSSSLSKRSLAAQGYVSDAFAPLLVPGIVRRTPLIHRGYYVRARAVRHCVRAFLDL--TGAIRSPTRAQILSLGSGSDSLYFRLKAAGLLTRTAVWEVDFPDVSRLKAKRIEETPELCAQTGPFKIGDSASTLCFE----SSDYRILGADLRELQRLGEALDSAGLD 178 HSP 2 Score: 27.7202 bits (60), Expect = 1.715e-23 Identity = 9/25 (36.00%), Postives = 16/25 (64.00%), Query Frame = 3 Query: 627 IQECVLIYLDPDSSRAIVGWASKHF 701 + E VL YL+P + A++ W ++ F Sbjct: 186 LAEAVLTYLEPSRAAALIAWVAQRF 210
BLAST of FC930673 vs. ExPASy Swiss-Prot
Match: LCMT2_HUMAN (Leucine carboxyl methyltransferase 2 OS=Homo sapiens GN=LCMT2 PE=1 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 8.320e-23 Identity = 61/172 (35.47%), Postives = 94/172 (54.65%), Query Frame = 2 Query: 128 AVQATNDDASASKLSCVKKGYMKDDYIHLFVRRPVRRSPIINRGYFARWAALRRLLYQFLDCGSDGDKKCHTKKQILSLGAGFDTTYFQLQAEGKAPHLYV-ELDFIEVTSKKAALIETHGELKDKVGVTASISQAKGEVL----GDNYKLLPVDLRDIQMLNEVINLANMD 628 AVQ TND ++ SK S +GY++D + L V RR+P+I+RGY+ R A+R + FL+ G + + QILSLGAGFD+ YF+L+ G+ V E+DF +V +KA E GE + +T + + +Y +L +DLR +Q + E + A +D Sbjct: 12 AVQNTNDSSALSKRSLAARGYVQDPFAALLVPGAARRAPLIHRGYYVRARAVRHCVRAFLE--QIGAPQAALRAQILSLGAGFDSLYFRLKTAGRLARAAVWEVDFPDVARRKA---ERIGETPELCALTGPFERGEPASALCFESADYCILGLDLRQLQRVEEALGAAGLD 178 HSP 2 Score: 31.9574 bits (71), Expect = 8.320e-23 Identity = 11/25 (44.00%), Postives = 19/25 (76.00%), Query Frame = 3 Query: 627 IQECVLIYLDPDSSRAIVGWASKHF 701 + E VL YL+P+S+ A++ WA++ F Sbjct: 186 LAEAVLTYLEPESAAALIAWAAQRF 210
BLAST of FC930673 vs. ExPASy Swiss-Prot
Match: LCMT1_CAEEL (Probable leucine carboxyl methyltransferase 1 OS=Caenorhabditis elegans GN=B0285.4 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.811e-19 Identity = 63/177 (35.59%), Postives = 92/177 (51.98%), Query Frame = 2 Query: 104 ADSQSNKAAVQATNDDASASKLSCVKKGYMKDDYIHLFVRRP-----VRRSPIINRGYFARWAALRRLLYQFLDCGSDGDKKCHTKKQILSLGAGFDTTYFQLQAEGKAPHLYVELDFIEVTSKKAALI-----ETHGELKDKVGVTASISQAKGEVLGDNYKLLPVDLRDIQMLNE 604 ++S S+ +VQ TNDDA+ K +KGY KD++I F RR P I+ GY+AR AA+ + + FL+ DG+ Q++SLG GFDT +++L + G YVE+DF VTSKK I +LK A +S ++ NY L+ DLR L++ Sbjct: 22 SNSVSDDYSVQRTNDDATQCKYFATQKGYWKDEFISRFANSSSNVSEARRFPEISMGYWARTAAIEKYVRDFLN-EFDGNA------QVVSLGCGFDTLFWRLVSSGAKLVKYVEVDFSSVTSKKIRHILKPIGPNSVDLKKSFESDAVVSH-HADLHAGNYHLIGADLRQANELDQ 190 HSP 2 Score: 28.4906 bits (62), Expect = 3.811e-19 Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 3 Query: 594 C*MKS*IWLIWIQECVLIYLDPDSSRAIV 680 C + I I+I ECVL+Y+ DSS A++ Sbjct: 195 CQLSHDIPTIFIAECVLVYMSADSSTALL 223
BLAST of FC930673 vs. ExPASy Swiss-Prot
Match: LCMT1_CAEBR (Probable leucine carboxyl methyltransferase 1 OS=Caenorhabditis briggsae GN=CBG18087 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.844e-18 Identity = 64/183 (34.97%), Postives = 94/183 (51.37%), Query Frame = 2 Query: 104 ADSQSNKAAVQATNDDASASKLSCVKKGYMKDDYIHLFVR-----RPVRRSPIINRGYFARWAALRRLLYQFLDCGSDGDKKCHTKKQILSLGAGFDTTYFQLQAEGKAPHLYVELDFIEVTSKKAALIETHG---ELKDKVGVTASISQAKGEVLGDNYKLLPVDLRDIQMLNEVINLANMD 628 ++S S+ +VQ TNDDA+ K ++KGY KDD+I F RR P I+ GY+AR AA+ + + FL+ DG+ Q++S G GFDT +++L + YVE+DF VTSKK I G +LK A +S ++ NY L+ DLR L + + +D Sbjct: 22 SNSVSDDYSVQRTNDDATQCKYFAIQKGYWKDDFIGRFANSSANVAEARRFPEISMGYWARTAAIEKYVRGFLE-EFDGN------AQVVSFGCGFDTLFWRLVSSDAKLAKYVEVDFSSVTSKKIRHILKPGGSVDLKKSFESEAVVSH-HADLHAGNYHLIGADLRQTSELEQKLATCQLD 196 HSP 2 Score: 23.8682 bits (50), Expect = 1.844e-18 Identity = 8/20 (40.00%), Postives = 16/20 (80.00%), Query Frame = 3 Query: 621 IWIQECVLIYLDPDSSRAIV 680 I+I ECVL+Y+ ++S +++ Sbjct: 202 IFIAECVLVYMSSNTSSSLL 221
BLAST of FC930673 vs. ExPASy Swiss-Prot
Match: LCMT1_EMENI (Leucine carboxyl methyltransferase 1 OS=Emericella nidulans GN=ppm1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.572e-17 Identity = 65/182 (35.71%), Postives = 94/182 (51.65%), Query Frame = 2 Query: 104 ADSQSNK-AAVQATNDDASASKLSCVKKGYMKDDYIHLF--VRRPVRRSPIINRGYFARWAALRRLLYQFLDCGSDGDKKCH-TKKQILSLGAGFDTTYFQLQAEGKA-PHLYVELDFIEVTSKKAALIETHGELKDKVGVT-ASISQAKGEVLGDNYKLLPVDLRDIQMLNEVINLANMDP 631 + S NK VQ T++DAS S+LS V+ GY++D + + + +RR PIINRG + R A+ +L+ FL +D D KKQI+SLGAG DT F+L + A +Y E+DF + K I+ L+ +G + SIS E+ Y + VDLR + E DP Sbjct: 30 SSSSGNKDRVVQGTDNDASVSRLSAVELGYLEDPFARALTPMGQEMRRLPIINRGTYVRTTAIDQLVASFLGLKADSDPTWKLKKKQIISLGAGSDTRVFRLLSLRPALDIIYHEIDFAVNNTAKIKAIQGTPLLQRVLGQSQVSISNEGDELHSPAYHIHAVDLRTLAQKGEGDKSTGQDP 211 HSP 2 Score: 23.483 bits (49), Expect = 5.572e-17 Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 3 Query: 627 IQECVLIYLDPDSSRAIV 680 + EC LIYL P+ + +V Sbjct: 228 LSECCLIYLSPNDAAGVV 245
BLAST of FC930673 vs. ExPASy Swiss-Prot
Match: LCMT1_HUMAN (Leucine carboxyl methyltransferase 1 OS=Homo sapiens GN=LCMT1 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17 Identity = 62/173 (35.84%), Postives = 90/173 (52.02%), Query Frame = 2 Query: 131 VQATNDDASASKLSCVKKGYMKDDYIHLFVR-RPVRRSPIINRGYFARWAALRRLLYQFLDCGSDGDKKCHTKKQILSLGAGFDTTYFQLQAEGKAPHLYVELDFIEVTSKKAALIETHGELKDKVGVTAS--ISQAKGEVL-GDNYKLLPVDLRDIQMLNEVINLANMDPRM 637 V+ T +DAS K V GY D YI FVR R++P INRGYFAR + +L+ FL +CH QI++LGAG DTT+++L+ E P Y E+DF + ++K I+ L + S Q G +L Y ++ DLRD+ L E + NM+ ++ Sbjct: 26 VRGTCEDASLCKRFAVSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHGVSQLIKAFLR-----KTECHC--QIVNLGAGMDTTFWRLKDEDLLPSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQL 191
BLAST of FC930673 vs. ExPASy Swiss-Prot
Match: LCMT1_RAT (Leucine carboxyl methyltransferase 1 OS=Rattus norvegicus GN=Lcmt1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.887e-17 Identity = 60/181 (33.15%), Postives = 95/181 (52.49%), Query Frame = 2 Query: 131 VQATNDDASASKLSCVKKGYMKDDYI-HLFVRRPVRRSPIINRGYFARWAALRRLLYQFLDCGSDGDKKCHTKKQILSLGAGFDTTYFQLQAEGKAPHLYVELDFIEVTSKK-----------AALIETHGELKDKVGVTASISQAKGEVLGDNYKLLPVDLRDIQMLNEVINLANMDPRM 637 V+ T +DAS K V G+ D YI HL + R++P INRGYFAR + +L+ FL +K + QIL+LGAG DTT+++L+ EG P+ Y E+DF + ++K ++E H E D + + + + +K Y ++ DLRD+ L E + NM+ ++ Sbjct: 24 VRGTCEDASLCKRFAVSIGHWHDPYIEHLVRQSKERKAPEINRGYFARVHGVSQLIKAFL-------RKTECRCQILNLGAGMDTTFWKLKDEGLLPNKYFEVDFPMIVTRKLHTIKNKPLLFRPIMELHPE--DTLQIDSHMLDSK------RYAIIGADLRDLSELEEKLKKCNMNTQL 189
BLAST of FC930673 vs. ExPASy Swiss-Prot
Match: LCMT1_ASPFU (Leucine carboxyl methyltransferase 1 OS=Aspergillus fumigatus GN=ppm1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.406e-17 Identity = 61/163 (37.42%), Postives = 89/163 (54.60%), Query Frame = 2 Query: 131 VQATNDDASASKLSCVKKGYMKDDYIHLFVR--RPVRRSPIINRGYFARWAALRRLLYQFLDCGSDGDKKCHTKKQILSLGAGFDTTYFQL----QAEGKAPHLYVELDFIEVTSKKAALIETHGELKDKVGVTASISQA---KGEVL-GDNYKLLPVDLRDI 589 VQ T++DAS S+LS V+ GY++D + + RR PIINRG + R A+ RL+ +FL+ S TKKQI+SLGAG DT F+L + + +Y E+DF T+ K I L+ +G+ ++ + A G+ L Y L PVDLR + Sbjct: 49 VQGTDNDASVSRLSAVEIGYLEDPFAKVLTPPGSGTRRLPIINRGTYVRTTAIDRLVARFLEGPS------QTKKQIISLGAGSDTRVFRLLSSRSSASSSDLIYHEIDFSANTAAKIKFIRAAPLLQRTLGLGSAQNVAIPDSGDALHSPTYHLHPVDLRTL 205 HSP 2 Score: 23.8682 bits (50), Expect = 9.406e-17 Identity = 9/23 (39.13%), Postives = 14/23 (60.87%), Query Frame = 3 Query: 627 IQECVLIYLDPDSSRAIVGWASK 695 I EC L+YL P + +V + +K Sbjct: 244 ISECCLVYLSPREAADVVDYFTK 266
BLAST of FC930673 vs. ExPASy Swiss-Prot
Match: LCMT1_GIBZE (Leucine carboxyl methyltransferase 1 OS=Gibberella zeae GN=PPM1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16 Identity = 57/130 (43.85%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 104 ADSQSNKAAVQATNDDASASKLSCVKKGYMKDDYIHLFVRR----PVRRSPIINRGYFARWAALRRLLYQFLDCGSDGDKKCHTKKQILSLGAGFDTTYFQLQAEGKAPHL-YVELDFIEVTSKKAALIE 478 + S ++ + +Q T+ DAS S+LS V GY+ D Y FVR RR PIINRG +AR +L L+ FL T KQI+SLGAG DT F+L A P L Y ELDF VTSKK ++ Sbjct: 31 SSSATHDSTIQGTDTDASVSRLSAVDLGYLDDPYAQYFVRSSAGPAARRLPIINRGTYARTISLDTLIESFLSADQSTGPD-STPKQIVSLGAGTDTRPFRLFASKARPGLVYHELDFEVVTSKKLRTVQ 159 The following BLAST results are available for this feature:
BLAST of FC930673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930673 ID=FC930673; Name=FC930673; organism=Citrus clementina; type=EST; length=701bpback to top |