FC930842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_ARATH (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=DXR PE=2 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 2.660e-52 Identity = 106/164 (64.63%), Postives = 131/164 (79.88%), Query Frame = 3 Query: 180 LMALNLQSPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSA-----QGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPGNR 656 +M LN SPAE KA+SFL+T+R N +PKLSGGF L+R++ FG+ V+CS Q PPPAWPGRAV E R++WDGPKPIS++GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+TLLADQV+RFKP +VAVRNESL++E+KEALA+++ PG + Sbjct: 1 MMTLNSLSPAESKAISFLDTSRFNP-IPKLSGGFSLRRRNQGRG-FGKGVKCSVKVQQQQQPPPAWPGRAVPEAPRQSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVRRFKPALVAVRNESLINELKEALADLDYKLEIIPGEQ 162 HSP 2 Score: 24.2534 bits (51), Expect = 2.660e-52 Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = 2 Query: 629 KPEILAGEQGVIEAA 673 K EI+ GEQGVIE A Sbjct: 154 KLEIIPGEQGVIEVA 168
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_MENPI (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Mentha piperita GN=DXR PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.540e-49 Identity = 99/156 (63.46%), Postives = 121/156 (77.56%), Query Frame = 3 Query: 201 SPAEIKALSFLETTRSNHRLP--KLSGGFPLKRKDNATATFGRIVQCSAQG--PPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPGNR 656 +P EIK LSFL++++SN+ L K GGF KRKD+ T + V CSAQ PPPAWPGRA E R TW+GPKPISV+GSTGSIGTQTLDIVAE+ DKFR+VALAAGSN+TLLADQVK FKP++V+V++ESL+ E+KEALA E+ P PG + Sbjct: 2 APTEIKTLSFLDSSKSNYNLNPLKFQGGFAFKRKDSG-CTAAKRVHCSAQSQSPPPAWPGRAFPEPGRMTWEGPKPISVIGSTGSIGTQTLDIVAENPDKFRIVALAAGSNVTLLADQVKAFKPKLVSVKDESLISELKEALAGFEDMPEIIPGEQ 156 HSP 2 Score: 25.0238 bits (53), Expect = 1.540e-49 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 632 PEILAGEQGVIEAA 673 PEI+ GEQG+IE A Sbjct: 149 PEIIPGEQGMIEVA 162
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_ORYSJ (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DXR PE=2 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 1.411e-44 Identity = 93/159 (58.49%), Postives = 116/159 (72.96%), Query Frame = 3 Query: 183 MALNLQS-PAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPGNR 656 MAL + S P ++ A+SFL++ R +L P + +D + R Q PPPAWPGRAV E R++WDGPKPIS++GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+TLLADQVK FKP++VAVRNESL+DE+KEALA+ + P PG + Sbjct: 1 MALKVVSFPGDLAAVSFLDSNRGG-AFNQLKVDLPFQTRDRRAVSLRRTCCSMQQAPPPAWPGRAVVEPGRRSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVKTFKPKLVAVRNESLVDELKEALADCDWKPEIIPGEQ 158
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_MICAN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Microcystis aeruginosa (strain NIES-843) GN=dxr PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.756e-21 Identity = 43/75 (57.33%), Postives = 64/75 (85.33%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESP 635 K IS+LGSTGSIGTQTLDIV +H DKF+VV LA G+NI LL++Q+++F+PQ+VA+ NES L+++K +++++ +P Sbjct: 2 KKISILGSTGSIGTQTLDIVTDHPDKFQVVGLATGNNIQLLSEQIRQFRPQIVAINNESQLEDLKSLISDLDYTP 76 HSP 2 Score: 23.0978 bits (48), Expect = 9.756e-21 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 632 PEILAGEQGVIEAA 673 P ILAG++GVIE A Sbjct: 76 PIILAGKEGVIEVA 89
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_ACAM1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acaryochloris marina (strain MBIC 11017) GN=dxr PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.039e-19 Identity = 41/80 (51.25%), Postives = 65/80 (81.25%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPG 650 K I++LGSTGSIGTQTLDIVA++ D+FR+V +AAG NI LL+ Q+++F+P++VA+ + + L ++K+A+A+V+ P+ G Sbjct: 2 KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGMAAGRNIELLSQQIRQFRPEIVAIADPNQLSDLKDAIADVDPQPQLLAG 81 HSP 2 Score: 24.6386 bits (52), Expect = 1.039e-19 Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 629 KPEILAGEQGVIEAA 673 +P++LAGE GV+E A Sbjct: 75 QPQLLAGEAGVVEVA 89
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_CYAP7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 7424) GN=dxr PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.105e-18 Identity = 44/75 (58.67%), Postives = 63/75 (84.00%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESP 635 K ISVLGSTGSIGTQTLDIVA++ D+F+VV LAAG+N+ LL+ QV +F+P++VA+ N L+ +KE+L++++ SP Sbjct: 2 KKISVLGSTGSIGTQTLDIVAQYPDQFQVVGLAAGNNVELLSAQVHQFRPEIVAICNLDHLEVLKESLSSLDYSP 76 HSP 2 Score: 23.483 bits (49), Expect = 1.105e-18 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 632 PEILAGEQGVIEAA 673 P IL GEQG++E A Sbjct: 76 PIILGGEQGIVEVA 89
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_CYAA5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain ATCC 51142) GN=dxr PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.437e-18 Identity = 44/82 (53.66%), Postives = 64/82 (78.05%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPGNR 656 K IS+LGSTGSIGTQTLDIV ++ D+F+VV LA SN+ LLA QV++F+P++VA+ +ES L +K+A+A+++ SP G + Sbjct: 2 KKISLLGSTGSIGTQTLDIVNQYPDQFQVVGLATRSNVELLATQVQQFRPEIVAICDESKLGSLKDAIASMDYSPLILAGEQ 83 HSP 2 Score: 23.8682 bits (50), Expect = 1.437e-18 Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 632 PEILAGEQGVIEAA 673 P ILAGEQGV E A Sbjct: 76 PLILAGEQGVAEVA 89
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_PROM9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9312) GN=dxr PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.920e-17 Identity = 42/72 (58.33%), Postives = 60/72 (83.33%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE 626 K I+VLGSTGSIGTQTL+I +E DKF+ VAL+AG NITLL +QVK KP+VVA+ +E+L++++K+ + N++ Sbjct: 2 KYITVLGSTGSIGTQTLEIASEQPDKFKAVALSAGRNITLLTEQVKTHKPEVVAIEDENLIEDLKDNINNLD 73
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_SYNY3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechocystis sp. (strain PCC 6803) GN=dxr PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.275e-17 Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE 629 K IS+LGSTGSIGTQTLDIV H D F+VV LAAG N+ LLA QV F+P++VA+R L+++K A+A + + Sbjct: 3 KRISILGSTGSIGTQTLDIVTHHPDAFQVVGLAAGGNVALLAQQVAEFRPEIVAIRQAEKLEDLKAAVAELTD 75
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_CYAP4 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxr PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.277e-17 Identity = 40/75 (53.33%), Postives = 61/75 (81.33%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESP 635 K I++LGSTGSIGTQTLDIVA++ D+FR+V LAAG ++ L Q+++F+PQ+VA+ +E LD++K A+A+++ P Sbjct: 2 KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGLAAGRSLDKLIPQIRQFRPQIVALADEQQLDDLKAAIADLDPQP 76 The following BLAST results are available for this feature:
BLAST of FC930842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930842 ID=FC930842; Name=FC930842; organism=Citrus clementina; type=EST; length=674bpback to top |