FC930913

Overview
NameFC930913
Unique NameFC930913
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length760
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930913 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.046e-45
Identity = 90/162 (55.56%), Postives = 113/162 (69.75%), Query Frame = 1
Query:  247 MAEVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDKGAAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKNFSWRHIGLVD*RLVIVIGAVM 732
            MAEVKL G   SPF +RV WALK+KGV YEF+ EDL NKS LLL+ NP+HKKIPVL+H GK +CESMVILEYI+E +    ++P +PYDRALARFW K+ EDKGAAVWK F S G+E +   +EA EML+ ++     +K F     G  D   ++  GA +
Sbjct:    1 MAEVKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPSILPKDPYDRALARFWAKYVEDKGAAVWKSFFSKGEEQEKAKEEAYEMLKILDNEFKDKKCFVGDKFGFAD---IVANGAAL 159          
BLAST of FC930913 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.989e-40
Identity = 83/151 (54.97%), Postives = 103/151 (68.21%), Query Frame = 1
Query:  247 MAEVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDKGAAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKNFSWRHIGLVD 699
            MAEVKL G   SPF +RV WALKLKGV YE++ ED  NKS+LLL+ NPVHKK+PVL+H GKP+ ESMVILEYI+ET+    ++P +PYDRALARFW KF  DK AAV   F   G+E +   +E  EML+ ++     +K F     G  D
Sbjct:    1 MAEVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKFLGDKVAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFAD 151          
BLAST of FC930913 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.225e-39
Identity = 80/151 (52.98%), Postives = 105/151 (69.54%), Query Frame = 1
Query:  247 MAEVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDKGAAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKNFSWRHIGLVD 699
            MAEVKL G   SPF +RV WALK+KGV YE++ ED  NKS+LLL+ NPV+KK+PVL+H GKP+ ESM+ILEYI+ET+    ++P +PYDRALARFW KF +DK AAV   F   G+E +   +E  EML+ ++     +K F+    G  D
Sbjct:    1 MAEVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFAD 151          
BLAST of FC930913 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.884e-38
Identity = 80/151 (52.98%), Postives = 102/151 (67.55%), Query Frame = 1
Query:  247 MAEVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDKGAAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKNFSWRHIGLVD 699
            MAEVKL G   SPF  RV WALK+KGV YE++ ED  NKS+LLL+ NP+HKK+PVL+H GK + ESMVILEYI+ET+    ++P +PYDRALARFW KF +DK  AV K F   G+E +   +E  EML+ ++     +K F     G  D
Sbjct:    1 MAEVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVPAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFAD 151          
BLAST of FC930913 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.595e-37
Identity = 81/157 (51.59%), Postives = 106/157 (67.52%), Query Frame = 1
Query:  253 EVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDK--GAAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKNFSWRHIGLVD*RLVIV 717
            +VKL G + SPFV RV  ALKLKGV Y+F+ E+L NKS LLLK+NPVHKK+PV VH  +P+ ES+VI+EYI+ETW  NP++P++PY RALARFW KF +DK  GA    +F    +E +  ++E  E LQ +E     +K F     GLVD   V +
Sbjct:    7 DVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAVFI 163          
BLAST of FC930913 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.934e-33
Identity = 71/151 (47.02%), Postives = 100/151 (66.23%), Query Frame = 1
Query:  253 EVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDK--GAAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKNFSWRHIGLVD 699
            EVKL G   SPF  RV  ALKLKG+PYE+V E L NKS LLL  NP+HKK+PVLVH GK + ES VILEYI+ETWPQNP++P +PY+R+ ARF+ K  +++        M R+  +  +   ++  E++  +E+  +G+  F  + +G +D
Sbjct:    6 EVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQNPILPQDPYERSKARFFAKLVDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYFGGKTVGFLD 156          
BLAST of FC930913 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.767e-28
Identity = 70/150 (46.67%), Postives = 97/150 (64.67%), Query Frame = 1
Query:  280 SPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQN-PLMPNNPYDRALARFWIKFAEDK----GAAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKN-FSWRHIGLVD*RLV 711
            S F  R+  AL LKG+ YE   E+LS+KS LLL+ NPVHKKIP+L+H GKP+CES+ ILEYI+E W +  PL+P++PY R+ ARFW  + ++K    G  VW      G++ +   KE +E+ +T+E   LG K  F   ++G VD  LV
Sbjct:   14 SSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWS---GKGEDQEEAKKEFIEIFKTLEGE-LGNKTYFGGDNLGFVDVALV 159          
BLAST of FC930913 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.937e-28
Identity = 72/172 (41.86%), Postives = 104/172 (60.47%), Query Frame = 1
Query:  253 EVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWP-----QNPLMPNNPYDRALARFWIKFAEDKGAAVWK--MFRS-TGQELQNTMKEALEMLQTVE----EHGLGEKNFSWRHIGLVD*RLVIVIGAVM 732
            E+KL G   SP+  RV   L LK +PYE+V E+L +KS LLL  NPVHK +PVL+H G+PV ES VI++YI+E WP     +  +MP++PY+RA+ARFW  + +DK    W   +F S T +E    + +A+  L+T+E    E   G+  F    +G VD    +V+G  +
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVD----VVLGGYL 173          
BLAST of FC930913 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.954e-27
Identity = 62/134 (46.27%), Postives = 89/134 (66.42%), Query Frame = 1
Query:  253 EVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETW-PQNPLMPNNPYDRALARFWIKFAEDKGAAVW-KMFRSTGQELQNTMKEALEMLQTVEE 648
            EV L     S +  R   AL  KGV YE+  E+L N+S LLL+ NP+HKKIPVL+H GKP+CES +I++YI+E W  ++PLMP++PY R+ ARFW+ + + K    W KM+ S G+E +   KE + + + +EE
Sbjct:    4 EVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEE 137          
BLAST of FC930913 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.685e-27
Identity = 69/150 (46.00%), Postives = 95/150 (63.33%), Query Frame = 1
Query:  280 SPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQN-PLMPNNPYDRALARFWIKFAEDK----GAAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKN-FSWRHIGLVD*RLV 711
            S F  R+  AL LKG+ YE   E+LS+KS LLL+ NPVHKKIP+L+H  K +CES+ ILEYI+E W    PL+P++PY+R+ ARFW  + + K    G  VW      G++ +   KE +E+L+T+E   LG K  F   ++G VD  LV
Sbjct:   14 SSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWS---GKGEDQEEAKKEFIEILKTLEGE-LGNKTYFGGDNLGFVDVALV 159          
The following BLAST results are available for this feature:
BLAST of FC930913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX1_SOLTU6.046e-4555.56Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX3_TOBAC9.989e-4054.97Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC2.225e-3952.98Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC1.884e-3852.98Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX6_SOYBN1.595e-3751.59Probable glutathione S-transferase OS=Glycine max ... [more]
GSTXA_ARATH6.934e-3347.02Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX1_NICPL1.767e-2846.67Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU6_ORYSJ3.937e-2841.86Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX3_SOYBN1.954e-2746.27Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_TOBAC5.685e-2746.00Probable glutathione S-transferase parA OS=Nicotia... [more]

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Properties
Property NameValue
Genbank descriptionC34110D06EF PostHarvP1 Citrus clementina cDNA clone C34110D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930913 ID=FC930913; Name=FC930913; organism=Citrus clementina; type=EST; length=760bp
CTCGCCGGGGGCACCAACGTAAAAAAATATTTAATTAAAGTCATCGTACT
AGTTCTTTGAATTCATCATTAATTAATCGTTTTATTAATGCGAAATCGAA
GCTTTCTGCTCAAGAAATCGAAGCTTTCTGCTCAAGAAAGCGCATTCCAT
AAATCACTATAAATTCAGAAACATGTGTAATGAGTTATCAGCTATACTCA
AGATCGACCAAAAAACCTGATATTCAAATTCAACCTAAGAATTATCATGG
CTGAAGTGAAGCTTCATGGGGCACTGCTGAGTCCATTTGTTTACAGGGTG
ATTTGGGCTCTGAAATTGAAAGGCGTGCCATATGAATTTGTTGCAGAAGA
TCTCTCAAACAAAAGTGCTTTGCTTTTGAAGCACAATCCGGTTCACAAGA
AGATCCCAGTGCTTGTCCATGGCGGAAAACCAGTTTGTGAGTCCATGGTT
ATTCTCGAATACATCGAAGAGACGTGGCCACAGAATCCCTTGATGCCAAA
TAATCCTTATGATAGAGCTCTTGCTCGATTCTGGATTAAATTCGCCGAAG
ACAAGGGTGCTGCTGTTTGGAAAATGTTTCGTAGCACTGGACAAGAACTA
CAAAACACAATGAAGGAAGCCTTGGAAATGCTACAAACCGTTGAAGAGCA
TGGCTTGGGAGAGAAAAATTTTTCATGGAGACATATTGGCTTAGTGGACT
AGCGTTTGGTCATTGTTATTGGTGCAGTCATGAGATGTACGGAGTAAATA
TTGATCAACA
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