FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM11_CUCSA (Glutamyl-tRNA reductase 1, chloroplastic OS=Cucumis sativus GN=HEMA1 PE=2 SV=1) HSP 1 Score: 324.709 bits (831), Expect = 1.424e-92 Identity = 168/213 (78.87%), Postives = 183/213 (85.92%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQ 639 GQGV GFGRNISGLFKHAI+VGKRVRTETNI ELALMKLPE SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERV AIREE+ VEIIYKPL+EMLSC A+ADV+FTSTASE+ LF K+ V+DLPPV VGGLRLFIDISVPRNVG+C+ ++E RVYNVDDLKEVVAANKEDRLRKAMEAQ+II+EES + Sbjct: 229 GQGVAGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPEPSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVTAIREEMKDVEIIYKPLTEMLSCTAEADVIFTSTASESLLFTKEQVKDLPPVGHDVGGLRLFIDISVPRNVGACINNLEDVRVYNVDDLKEVVAANKEDRLRKAMEAQSIITEESKQFE 441 HSP 2 Score: 36.965 bits (84), Expect = 1.424e-92 Identity = 16/17 (94.12%), Postives = 16/17 (94.12%), Query Frame = 3 Query: 627 KQFAAWRDSLETVPTIK 677 KQF AWRDSLETVPTIK Sbjct: 438 KQFEAWRDSLETVPTIK 454
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM11_ARATH (Glutamyl-tRNA reductase 1, chloroplastic OS=Arabidopsis thaliana GN=HEMA1 PE=2 SV=2) HSP 1 Score: 321.242 bits (822), Expect = 5.885e-91 Identity = 163/213 (76.53%), Postives = 184/213 (86.38%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQ 639 GQGV GFGRNISGLFKHAI+VGKRVRTETNI ELALMKLP+SS+ +ARM VIGAGKMGKLVIKHL+AKGCTK+VVVNRSEERV+AIREE+ G+EIIY+PL EML+CA++ADVVFTSTASE PLFLK+HV++LP VGGLR F+DISVPRNVGSCV +VETARVYNVDDLKEVVAANKEDR+RKAMEAQ II+EES + Sbjct: 222 GQGVNGFGRNISGLFKHAITVGKRVRTETNIASGAVSVSSAAVELALMKLPQSSNVSARMCVIGAGKMGKLVIKHLMAKGCTKVVVVNRSEERVSAIREEMPGIEIIYRPLDEMLACASEADVVFTSTASETPLFLKEHVENLPQASPEVGGLRHFVDISVPRNVGSCVGEVETARVYNVDDLKEVVAANKEDRMRKAMEAQTIITEESTQFE 434 HSP 2 Score: 35.039 bits (79), Expect = 5.885e-91 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 3 Query: 630 QFAAWRDSLETVPTIK 677 QF AWRDSLETVPTIK Sbjct: 432 QFEAWRDSLETVPTIK 447
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM12_ARATH (Glutamyl-tRNA reductase 2, chloroplastic OS=Arabidopsis thaliana GN=HEMA2 PE=2 SV=2) HSP 1 Score: 307.375 bits (786), Expect = 8.426e-87 Identity = 164/215 (76.28%), Postives = 183/215 (85.12%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHAT-ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELN-GVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQ 639 GQGV GFGRNISGLFKHAI+VGKRVRTETNI ELALMKLPESSHA+ ARMLV+GAGKMGKLVIKHLVAKGCTKMVVVNRSEE+VAA+R E+ GVEIIYKPL EMLSCAA+ADVVFTSTASE PLFLK+ V+ LPPV A RLF+DISVPRNVGSCVA+++ RV+NVDDLKEVVAANKEDR+RKAM+AQAII++ES + Sbjct: 213 GQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPESSHASSARMLVVGAGKMGKLVIKHLVAKGCTKMVVVNRSEEKVAAVRNEMPPGVEIIYKPLDEMLSCAAEADVVFTSTASETPLFLKEQVETLPPVRDA----RLFVDISVPRNVGSCVAEIDGTRVFNVDDLKEVVAANKEDRVRKAMDAQAIITDESKHFE 423 HSP 2 Score: 35.039 bits (79), Expect = 8.426e-87 Identity = 15/17 (88.24%), Postives = 15/17 (88.24%), Query Frame = 3 Query: 627 KQFAAWRDSLETVPTIK 677 K F AWRDSLETVPTIK Sbjct: 420 KHFEAWRDSLETVPTIK 436
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM13_HORVU (Glutamyl-tRNA reductase 3, chloroplastic OS=Hordeum vulgare GN=HEMA3 PE=2 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.445e-77 Identity = 141/208 (67.79%), Postives = 165/208 (79.33%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G G+NI +FK AI+ GKRVR+ETNI ELALMKLP+S +ARML+IGAGKMG+LV KHL AKGC K+V+VNRS ERV AIREE+ G+EI+Y+ L+EM AADADVVFTST+SE+PLF K+H + LPPV A+GG+RLF+DISVPRNV +CV+DV ARVYNVDDLKEVV ANKEDRLRKAMEAQ IISEE Sbjct: 209 GQNSGGLGKNIDRMFKDAITAGKRVRSETNISCGAVSVSSAAVELALMKLPKSECLSARMLLIGAGKMGRLVAKHLAAKGCKKVVIVNRSVERVDAIREEMQGIEIVYRSLTEMYEAAADADVVFTSTSSESPLFTKEHAEALPPVSGALGGVRLFVDISVPRNVSACVSDVGHARVYNVDDLKEVVEANKEDRLRKAMEAQTIISEE 416 HSP 2 Score: 35.4242 bits (80), Expect = 2.445e-77 Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTIK 677 +K+F AWRDS+ETVPTIK Sbjct: 417 LKRFEAWRDSMETVPTIK 434
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM11_HORVU (Glutamyl-tRNA reductase 1, chloroplastic OS=Hordeum vulgare GN=HEMA1 PE=1 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 5.425e-77 Identity = 138/208 (66.35%), Postives = 167/208 (80.29%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G G+NI +FK AI+ GKRVR ETNI ELA+MKLP+S +ARML+IGAGKMGKLV+KHL+AKGC K+VVVNRS ERV AIREE+ +EI+Y+PL+EM AADADVVFTSTASE+ LF K+H + LPP+ A+GG+RLF+DISVPRNVG+C+++VE ARVYNVDDLKEVV ANKEDR+RKAMEAQ II++E Sbjct: 203 GQNSGGLGKNIDRMFKDAITAGKRVRCETNISAGAVSVSSAAVELAMMKLPKSECLSARMLLIGAGKMGKLVVKHLIAKGCKKVVVVNRSVERVDAIREEMKDIEIVYRPLTEMYEAAADADVVFTSTASESLLFTKEHAEVLPPISLAMGGVRLFVDISVPRNVGACLSEVEHARVYNVDDLKEVVEANKEDRVRKAMEAQTIITQE 410 HSP 2 Score: 36.1946 bits (82), Expect = 5.425e-77 Identity = 15/18 (83.33%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTIK 677 +K+F AWRDSLETVPTIK Sbjct: 411 LKRFEAWRDSLETVPTIK 428
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM12_HORVU (Glutamyl-tRNA reductase 2 (Fragment) OS=Hordeum vulgare GN=HEMA2 PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 7.082e-77 Identity = 138/208 (66.35%), Postives = 166/208 (79.81%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G G+NI +FK AI+ GKR R ETNI ELA+MKLP+S +ARML+IGAGKMGKLV+KHL+AKGC K+VVVNRS ERV AIREE+ +EI+Y+PL+EM AADADVVFTSTASE+ LF K+H + LPP+ A+GG+RLF+DISVPRNVG+C++ VE ARVYNVDDLKEVV ANKEDR+RKAMEAQAII++E Sbjct: 141 GQNSGGLGKNIDRMFKDAITAGKRARCETNISAGAVSVSSAAVELAMMKLPKSECLSARMLLIGAGKMGKLVVKHLIAKGCKKVVVVNRSVERVDAIREEMKDIEIVYRPLTEMYEAAADADVVFTSTASESLLFTKEHAEALPPISLAMGGVRLFVDISVPRNVGACLSQVEHARVYNVDDLKEVVEANKEDRVRKAMEAQAIITQE 348 HSP 2 Score: 36.1946 bits (82), Expect = 7.082e-77 Identity = 15/18 (83.33%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTIK 677 +K+F AWRDSLETVPTIK Sbjct: 349 LKRFEAWRDSLETVPTIK 366
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_ORYSJ (Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os10g0502400 PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 4.542e-76 Identity = 138/208 (66.35%), Postives = 164/208 (78.85%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G G+NI +FK AI+ GKRVR ETNI ELALMKLP+S +ARML+IGAGKMGKLV+KHL+AKGC K+VVVNRS ERV AIREE+ +EI+Y+PL+EM AA+ADVVFTSTASE PLF K+H + LP + A+GG+RLF+DISVPRNV +CV++V ARVYNVDDLKEVV ANKEDRLRKAMEAQ II++E Sbjct: 213 GQNSGGLGKNIDRMFKDAITAGKRVRCETNISSGAVSVSSAAVELALMKLPKSECLSARMLLIGAGKMGKLVVKHLIAKGCKKVVVVNRSVERVDAIREEMKDIEIVYRPLTEMYEAAAEADVVFTSTASETPLFTKEHAEALPAISDAMGGVRLFVDISVPRNVSACVSEVGHARVYNVDDLKEVVEANKEDRLRKAMEAQTIITQE 420 HSP 2 Score: 36.1946 bits (82), Expect = 4.542e-76 Identity = 15/18 (83.33%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTIK 677 +K+F AWRDSLETVPTIK Sbjct: 421 LKRFEAWRDSLETVPTIK 438
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_ORYSI (Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_033071 PE=2 SV=2) HSP 1 Score: 270.396 bits (690), Expect = 4.542e-76 Identity = 138/208 (66.35%), Postives = 164/208 (78.85%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G G+NI +FK AI+ GKRVR ETNI ELALMKLP+S +ARML+IGAGKMGKLV+KHL+AKGC K+VVVNRS ERV AIREE+ +EI+Y+PL+EM AA+ADVVFTSTASE PLF K+H + LP + A+GG+RLF+DISVPRNV +CV++V ARVYNVDDLKEVV ANKEDRLRKAMEAQ II++E Sbjct: 213 GQNSGGLGKNIDRMFKDAITAGKRVRCETNISSGAVSVSSAAVELALMKLPKSECLSARMLLIGAGKMGKLVVKHLIAKGCKKVVVVNRSVERVDAIREEMKDIEIVYRPLTEMYEAAAEADVVFTSTASETPLFTKEHAEALPAISDAMGGVRLFVDISVPRNVSACVSEVGHARVYNVDDLKEVVEANKEDRLRKAMEAQTIITQE 420 HSP 2 Score: 36.1946 bits (82), Expect = 4.542e-76 Identity = 15/18 (83.33%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTIK 677 +K+F AWRDSLETVPTIK Sbjct: 421 LKRFEAWRDSLETVPTIK 438
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM12_CUCSA (Glutamyl-tRNA reductase 2, chloroplastic OS=Cucumis sativus GN=HEMA2 PE=2 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 2.236e-75 Identity = 142/213 (66.67%), Postives = 167/213 (78.40%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQ 639 GQGV GF R ISGLFKHAI+VGKRVRTETNI ELA KLPESS+ATA+++V+GAGKMGKLVIKHLVAKGC KMVVVNR+++ V A+ EEL VEIIYKPLS++L+CA++ADV+FT TAS+ PLF K+HV LPP G RLF+DISVPRNV V+D+ET V+NVDDLKEVVAANKEDRL+K EAQ+II EE N + Sbjct: 221 GQGVAGFDRKISGLFKHAITVGKRVRTETNISSGSFSVSSAAVELAQKKLPESSYATAKVMVVGAGKMGKLVIKHLVAKGCRKMVVVNRTQDSVDAV-EELKDVEIIYKPLSKILACASEADVIFTCTASKTPLFTKEHVAMLPPAGTET-GRRLFVDISVPRNVEQRVSDLETVSVFNVDDLKEVVAANKEDRLKKVQEAQSIIGEEINKFE 431 HSP 2 Score: 35.039 bits (79), Expect = 2.236e-75 Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTIK 677 I +F AWRDSLETVPTIK Sbjct: 427 INKFEAWRDSLETVPTIK 444
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_CYAA5 (Glutamyl-tRNA reductase OS=Cyanothece sp. (strain ATCC 51142) GN=hemA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.520e-38 Identity = 90/209 (43.06%), Postives = 127/209 (60.77%), Query Frame = 1 Query: 16 GFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQL 642 G GR + LFK AI+ GKRVR+ETNI ELA+ K+ + AT + +IGAGKM L++KHLVAKG T + +VNRS+ R + ++ E+ L EM+S + +VFTST + P+ +D++++ V +A GL LF DISVPRNV + V D+E YNVDDLK VVA N R + A+EA+ ++ EE + +L Sbjct: 133 GIGRLLDRLFKQAITAGKRVRSETNIGTGAVSISSAAVELAITKVDDL--ATRNISIIGAGKMACLLVKHLVAKGATSITIVNRSQRRAEELAKKFPQAELTLVSLDEMMSVVGKSHLVFTSTGATEPILHQDNLRE---VVSAEQGLMLF-DISVPRNVATNVQDLEIVEAYNVDDLKAVVAQNHASRRQMALEAEGLLEEEVEAFEL 335 HSP 2 Score: 24.2534 bits (51), Expect = 3.520e-38 Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTI 674 ++ F W SLETVPTI Sbjct: 330 VEAFELWWRSLETVPTI 346 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |