FC930980

Overview
NameFC930980
Unique NameFC930980
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6173 contig Ccv1_Contig6173:25..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 5.716e-103
Identity = 187/214 (87.38%), Postives = 196/214 (91.59%), Query Frame = 3
Query:   72 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            MS + GKY DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVE NRRALRELLFC PGALQY+SGVILFEETLYQKT  GKPFVDVLKEGGVLPGIKVDKGT+E+ GT+ ETTTQG D L +RC KYYEAGARFAKWRAVLKIGPNEPSQLAI+ NA GLARYAIICQENGLVPIVEPEILVDGPHDI +CA VTE VLAACYKALN+
Sbjct:    1 MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEENRRALRELLFCCPGALQYISGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTIEVVGTDKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLAIDLNAQGLARYAIICQENGLVPIVEPEILVDGPHDIDRCAYVTETVLAACYKALNE 214          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 371.703 bits (953), Expect = 2.172e-102
Identity = 186/214 (86.92%), Postives = 196/214 (91.59%), Query Frame = 3
Query:   72 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            MS + GKY DELIKNAAYIGTPGKGILAADESTGTIGKR +SINVENVE NRR+LRELLFCTPGALQYLSGVILFEETLYQKT  GKPFVDVLKEGGVLPGIKVDKGT+E+AGT  ETTTQG D L +RC KYYEAGARFAKWRAVLKIGPNEPSQLAI+ NA GLARYAIICQENGLVPIVEPEILVDGPHDI +CA V+E VLAACYKALN+
Sbjct:    1 MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFCTPGALQYLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTIEVAGTEKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLAIDLNAQGLARYAIICQENGLVPIVEPEILVDGPHDIDRCAYVSEVVLAACYKALNE 214          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 2.837e-102
Identity = 185/214 (86.45%), Postives = 195/214 (91.12%), Query Frame = 3
Query:   72 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            M+ ++GKYADELI NA+YI TPGK ILAADESTGTIGKR  SINVENVESNRRALRELLF TPGAL YLSGVILFEETLYQKTA GKPFVD +K+GGVLPGIKVDKGTVELAGTNGETTTQGLDGL QRC +YY AGARFAKWRAVLKIGP EPS LAI ENANGLARY IICQENGLVPIVEPEILVDG HDI +CA+V+ERVLAACYKALND
Sbjct:    1 MTAYRGKYADELIANASYIATPGKVILAADESTGTIGKRFPSINVENVESNRRALRELLFTTPGALPYLSGVILFEETLYQKTADGKPFVDAMKDGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCAQYYTAGARFAKWRAVLKIGPTEPSPLAILENANGLARYGIICQENGLVPIVEPEILVDGTHDIDRCAEVSERVLAACYKALND 214          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 4.239e-98
Identity = 185/215 (86.05%), Postives = 194/215 (90.23%), Query Frame = 3
Query:   72 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGA-LQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            MS FK KY DELI NAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNR+ALRELLF      LQYLSGVILFEETLYQKTAAGKPFVDVL E GVLPGIKVDKGTVELAGT+GETTTQGLDGL  RC+KYYEAGARFAKWRAVLKIG NEPS+ +I+ENA GLARYA+ICQENGLVPIVEPEILVDG HDI KCA +TERVLAA YKAL+D
Sbjct:    1 MSHFKSKYHDELIANAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRQALRELLFTASWLFLQYLSGVILFEETLYQKTAAGKPFVDVLNEAGVLPGIKVDKGTVELAGTDGETTTQGLDGLGARCRKYYEAGARFAKWRAVLKIGANEPSEHSIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDILKCAAITERVLAATYKALSD 215          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 2.104e-97
Identity = 183/215 (85.12%), Postives = 191/215 (88.84%), Query Frame = 3
Query:   72 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAIN-ENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            MS FK KY DELI NAAYIGTPGKGILAADESTGTIGKRL+SINVENVE+NRRALRELLF  P  LQYLSGVILFEETLYQ TAAGKPFVDVL E GVLPGIKVDKGTVELAGT+GETTTQGLDGL  RC KYYEAGARFAKWRAVLKIGPNEPS   ++ ENA GLARYA+ICQENGLVPIVE EILVDG HDI KCA +TERVLAA YKAL+D
Sbjct:    1 MSNFKSKYHDELIANAAYIGTPGKGILAADESTGTIGKRLASINVENVETNRRALRELLFTAPNVLQYLSGVILFEETLYQSTAAGKPFVDVLNEAGVLPGIKVDKGTVELAGTDGETTTQGLDGLGARCAKYYEAGARFAKWRAVLKIGPNEPSLSILSIENAYGLARYAVICQENGLVPIVELEILVDGSHDIHKCAAITERVLAATYKALSD 215          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 1.044e-96
Identity = 174/214 (81.31%), Postives = 191/214 (89.25%), Query Frame = 3
Query:   72 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            MS F GKYADELIKNA YI TPGKGILAADESTGTIGKRL+SINVEN+E+NR+ALRELLF +P ALQYLSGVILFEETLYQK++ GKPFV++L+E  V+PGIKVDKG VELAGT+GETTTQG D L  RCQ+YY+AGARFAKWRAVLKIGPNEPS+L+I +NA GLARYAIICQENGLV  VEPEIL DG HDI KCA VTE VLAACYKALND
Sbjct:    1 MSAFVGKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENIEANRQALRELLFTSPNALQYLSGVILFEETLYQKSSEGKPFVEILQENNVIPGIKVDKGVVELAGTDGETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPNEPSELSIQQNAQGLARYAIICQENGLVLFVEPEILTDGSHDIAKCAAVTETVLAACYKALND 214          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 319.701 bits (818), Expect = 9.795e-87
Identity = 162/213 (76.06%), Postives = 176/213 (82.63%), Query Frame = 3
Query:   72 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALN 710
            MS F  KY DELIK A YI TPG+GILAADEST TIGKR + INVEN ESNR+A RELLF +PG+   LSGVILFEETLYQKT+ GKPFVD+L E GV+PGIKVDKG V+LAGTNGETTTQGLD L  RCQ+YYEAGARFAKWRA  KIG  EPS L+I E+A  LARYAIICQENGLVPIVEPE+L  G HDIKKCA VTE VLAA +KALN
Sbjct:    1 MSAFVSKYEDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELLFTSPGSYPCLSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGARCQQYYEAGARFAKWRAFFKIGATEPSVLSIQEDARVLARYAIICQENGLVPIVEPEVLTGGSHDIKKCAAVTETVLAAVFKALN 213          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 8.900e-72
Identity = 142/211 (67.30%), Postives = 166/211 (78.67%), Query Frame = 3
Query:   90 KYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTP-GALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKI--GPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            K+ADELI  A  I  PGKGILAADEST TIG R   IN+EN E NRRA RELL  T  G  +++ G+IL+EETLYQK A G+ F DVL+E  +  GIKVDKG V + GT+GET+TQGLDGL +RC+KYYEAGARFAKWRAVLKI    N PSQL+I ENA+ LARYA ICQENGLVPIVEPEIL+DG H +++ A+VTE+VLAA +KALND
Sbjct:    4 KFADELIATAKAIVAPGKGILAADESTNTIGARFKKINLENNEENRRAYRELLIGTGNGVNEFIGGIILYEETLYQKMADGRLFTDVLREQKIHIGIKVDKGVVPIPGTDGETSTQGLDGLAERCKKYYEAGARFAKWRAVLKIDLAKNCPSQLSITENAHTLARYAAICQENGLVPIVEPEILMDGNHTVEQSAEVTEKVLAAVFKALND 214          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 4.884e-70
Identity = 137/205 (66.83%), Postives = 161/205 (78.54%), Query Frame = 3
Query:  102 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCT-PGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            EL + A  I + GKGILAADESTGT+GKRLS+I VENV+ NRR  R+LLF + P   + + GVI +EETLYQKT  G PFV ++K+ G++ GIKVDKGTV LAGT+GE+TTQGLDGL +RC +Y + GA FAKWR VLKI  N PS LAI ENAN LARYA ICQ+NGLVPIVEPEIL DG HD+K C  VTE+VLAA YKAL+D
Sbjct:   15 ELAEIAQRIVSNGKGILAADESTGTMGKRLSAIKVENVDENRRVYRQLLFSSDPSVTKAIGGVIFYEETLYQKTDDGTPFVKLIKDRGIVVGIKVDKGTVPLAGTDGESTTQGLDGLAERCARYKKDGADFAKWRCVLKISKNTPSALAIAENANVLARYASICQQNGLVPIVEPEILPDGDHDLKTCQYVTEKVLAATYKALSD 219          
BLAST of FC930980 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.165e-69
Identity = 135/205 (65.85%), Postives = 157/205 (76.59%), Query Frame = 3
Query:  102 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCT-PGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLTQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALND 713
            EL +NA+ I  PGKG+LAADEST TIGKR ++IN+EN E NRRA RELLF T P   +++SGVILF ET+YQKT  GKPFV++L+E GVLPGIKVD G V L GT  E TTQGLD L QRC +YY  G RFAKWR VLKI  + PS LA+ ENAN LARYA ICQ+NGLVPIVEPE+L DG HD++    VTE+VL+  YKAL D
Sbjct:   15 ELRENASAIVAPGKGLLAADESTNTIGKRFAAINLENTEENRRAYRELLFTTDPEFAKHISGVILFHETVYQKTKDGKPFVELLRERGVLPGIKVDLGVVPLGGTADECTTQGLDNLAQRCAQYYNDGCRFAKWRCVLKISSHNPSYLAMLENANVLARYAFICQQNGLVPIVEPEVLPDGDHDLETAQRVTEQVLSFVYKALAD 219          
The following BLAST results are available for this feature:
BLAST of FC930980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF_MAIZE5.716e-10387.38Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ORYSJ2.172e-10286.92Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF_SPIOL2.837e-10286.45Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_PEA4.239e-9886.05Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_CICAR2.104e-9785.12Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA1.044e-9681.31Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ARATH9.795e-8776.06Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_DICDI8.900e-7267.30Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF2_LAMJA4.884e-7066.83Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALF_ECHMU3.165e-6965.85Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34100B03EF PostHarvP1 Citrus clementina cDNA clone C34100B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930980 ID=FC930980; Name=FC930980; organism=Citrus clementina; type=EST; length=721bp
GTCTGCATAAAATTCGCTCTCTCTGTTTCTCCCTCTAACAAAACAAATTT
TCTATCTTCAAGTCGATCACCATGTCTTGCTTCAAGGGCAAATACGCCGA
TGAGCTCATTAAAAACGCTGCCTACATTGGCACCCCTGGAAAGGGTATCC
TTGCTGCTGATGAGTCAACAGGCACCATTGGCAAGCGTCTATCCAGCATC
AATGTTGAGAATGTTGAGTCAAACAGGCGTGCTCTCCGCGAGCTCCTTTT
CTGCACTCCCGGTGCCCTTCAGTACCTCAGTGGTGTCATCCTCTTCGAGG
AGACCCTCTACCAGAAGACTGCTGCTGGCAAGCCCTTTGTTGATGTCTTG
AAGGAGGGTGGAGTCCTCCCTGGAATTAAGGTTGACAAGGGTACTGTTGA
GCTTGCTGGTACCAATGGTGAGACCACCACCCAGGGTCTTGATGGCCTCA
CCCAGCGCTGCCAGAAATACTATGAAGCTGGTGCTCGTTTTGCCAAATGG
CGTGCTGTTCTTAAGATTGGCCCTAATGAGCCTTCGCAGCTGGCCATCAA
TGAGAATGCCAATGGCCTGGCCCGATATGCTATCATCTGCCAGGAGAATG
GCCTTGTTCCCATTGTTGAACCTGAGATCCTTGTTGACGGTCCCCATGAC
ATCAAGAAGTGTGCTGATGTGACCGAGCGTGTTCTTGCTGCATGCTACAA
GGCTCTGAATGACACCATGTC
back to top