FC930993
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930993 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.080e-38 Identity = 96/192 (50.00%), Postives = 117/192 (60.94%), Query Frame = 3 Query: 132 IPRALRCTVAPSATSASRFFNTNAVHQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTENPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSV--RRYTSRIDLPEKLYRIDQIKAEMKNGVLKVTVPKVKEEERADV 689 +PRALR V P A S SR FNTNA Y TRSLSQ+LNFMDQ++E P S TRG G+RRGW+ KE DDAL+L IDMPGL +EDV+++LEQNTLVIR S RR+TSRI+LPEK+Y+ D+IKAEMKNGVLKV +PK+KE+ER ++ Sbjct: 20 VPRALRA-VRPVAAS-SRLFNTNAARNYEDGVDRNHHSNRHVSRHGGDFFSHILDPFTP-----TRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDERNNI 204
BLAST of FC930993 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.122e-37 Identity = 92/178 (51.69%), Postives = 109/178 (61.24%), Query Frame = 3 Query: 162 PSATSASRFFNTNAVHQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTENPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXX--SVRRYTSRIDLPEKLYRIDQIKAEMKNGVLKVTVPKVKEEERADV 689 P A+SASR FNTNA+ QY RSLSQVLN +D +T+NP S RRGWDA+ET+DAL L +DMPGLGKEDV++S+EQNTL I+ S RR++SRIDLPEKLY+ID IKAEMKNGVLKVTVPK+KEEER +V Sbjct: 23 PVASSASRSFNTNAMRQYDQHSDDRNVDVYRHSFPRTRRDDLLLSDVFDPFSPP-RSLSQVLNMVDLLTDNPVLSAAS---RRGWDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEGAKESEEKEKSGRRFSSRIDLPEKLYKIDVIKAEMKNGVLKVTVPKMKEEERNNV 196
BLAST of FC930993 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.738e-37 Identity = 94/200 (47.00%), Postives = 113/200 (56.50%), Query Frame = 3 Query: 132 IPRALRCTVAPSATS------ASRFFNTNAVHQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTENPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSV----RRYTSRIDLPEKLYRIDQIKAEMKNGVLKVTVPKVKEEERADV 689 + R L ++AP + S +SR FNTNAV Y TRS+SQVLN MDQ ENP S TRG G RRGWD KE DDAL L IDMPGL +EDV+++LEQ+TLVIR RR+TSRI LP+K+Y+ID+IKAEMKNGVLKV +PK+KE+ER DV Sbjct: 7 LKRLLSSSIAPRSRSVLRPAVSSRLFNTNAVRSYDDDGENGDGVDLYRRSVPRRRGDFFSDVFDPFSP--TRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQERNDV 204
BLAST of FC930993 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.262e-35 Identity = 73/126 (57.94%), Postives = 93/126 (73.81%), Query Frame = 3 Query: 324 TRSLSQVLNFMDQMTENPFFSGTRGG---LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVRRYTSRIDLPEKLYRIDQIKAEMKNGVLKVTVPKVKEEERADVF 692 TRS+ Q++N MDQ+ ENPF + +RG +RRGWD +E ++AL L +DMPGL KEDV+VS+E NTL+I+ RRY+SRI+L LY+ID IKAEMKNGVLKVTVPK+KEEE+ DVF Sbjct: 74 TRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEKKDVF 199
BLAST of FC930993 vs. ExPASy Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.293e-35 Identity = 65/94 (69.15%), Postives = 78/94 (82.98%), Query Frame = 3 Query: 408 RGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVRRYTSRIDLPEKLYRIDQIKAEMKNGVLKVTVPKVKEEERADV 689 RGWDA+ET+DAL+L +DMPGL KEDV++S+EQNTL+I+ S RRYTSRIDLP+KLY+IDQI+AEMKNGVLKV VPK+KEEER DV Sbjct: 112 RGWDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAKEGDEEESARRYTSRIDLPDKLYKIDQIRAEMKNGVLKVVVPKMKEEERKDV 205 HSP 2 Score: 27.335 bits (59), Expect = 3.293e-35 Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 302 CV*SIFTNKEPEPGPELHGSDDGES 376 CV SIF++ E EPG E G G+S Sbjct: 72 CVGSIFSDSEFEPGSEHDGPGHGQS 96 HSP 3 Score: 25.7942 bits (55), Expect = 3.293e-35 Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 3 Query: 147 RCTVAPSATSASRFFNTNAVHQY 215 R + P+A+++ R F+TNA+ QY Sbjct: 18 RSLLRPAASASHRSFDTNAMRQY 40
BLAST of FC930993 vs. ExPASy Swiss-Prot
Match: HS24M_ORYSJ (24.1 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP24.1 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.071e-26 Identity = 65/124 (52.42%), Postives = 85/124 (68.55%), Query Frame = 3 Query: 327 RSLSQVLNFMDQMTENPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVR--RYTSRIDLPEKLYRIDQIKAEMKNGVLKVTVPKVKEEERADVF 692 +SL ++L+ MD + P LRRGW+AKE+++AL+L +DMPGLGKE V+V EQN+LVI+ RY+ RI+L ++YR+DQIKAEMKNGVLKV VPKVKEE+R DVF Sbjct: 93 QSLGRLLSLMDDLA-TPAGRAGAATLRRGWNAKESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEGEKEAGEDEGAAPARYSGRIELAPEVYRMDQIKAEMKNGVLKVVVPKVKEEQRRDVF 215
BLAST of FC930993 vs. ExPASy Swiss-Prot
Match: HS26M_ORYSJ (26.2 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP26.2 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.655e-22 Identity = 64/130 (49.23%), Postives = 79/130 (60.77%), Query Frame = 3 Query: 330 SLSQVLNFM-DQMTENPFFSGTRG----GLRRG--WDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVR--RYTSRIDLPEKLYRIDQIKAEMKNGVLKVTVPKVKEEERADVF 692 SL ++L M D GT G RRG W AKE DDA++L + MPGLGKE V+V EQN+LVI+ RYT RI+LP +++D+IKAEMKNGVL+V VPK+KEEER DVF Sbjct: 114 SLGRLLALMEDAAVATAAAPGTNGLATAAARRGGWWVAKEDDDAVHLKVSMPGLGKEHVKVWAEQNSLVIKGEGEKDPEDDADAAPPRYTRRIELPADAFKMDKIKAEMKNGVLRVAVPKLKEEERKDVF 243
BLAST of FC930993 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 52/129 (40.31%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 327 RSLSQVLNFMDQMTEN--PFFSGTRGG-----LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI----RXXXXXXXXXXXSVRRYTSRIDLPEKLYRIDQIKAEMKNGVLKVTVPKVKEEER 680 R++ Q+L+ MD+M E+ P RGG +R WD KE + + + DMPGL KEDV++S+E N LVI + SV Y +R+ LP+ + D+IKAE+KNGVL +T+PK K E + Sbjct: 93 RTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEK-DKIKAELKNGVLFITIPKTKVERK 220
BLAST of FC930993 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.198e-15 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 327 RSLSQVLNFMDQMTENPF-FSGTR---GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI----RXXXXXXXXXXXSVRRYTS---RIDLPEKLYRIDQIKAEMKNGVLKVTVPKVKEEER 680 RS+ Q+L+ MD++ E+ F G G +R WD K+ + + + DMPGL KEDV+VS+E + LVI + S R Y+S R+ LP+ + D++KAE+KNGVL +T+PK K E + Sbjct: 47 RSMRQILDTMDRVFEDTMTFPGRNIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEK-DKVKAELKNGVLYITIPKTKVERK 174
BLAST of FC930993 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 44/128 (34.38%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 327 RSLSQVLNFMDQMTENPF-FSGTR----GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI-----RXXXXXXXXXXXSVRRYTSRIDLPEKLYRIDQIKAEMKNGVLKVTVPKVKEEER 680 R++ Q+++ MD++ E+ F G+R G +R WD K+ ++ + + DMPGL KE+V+VS+E + LVI + + Y +R+ LP+ + + D++KAE+KNGVL +++PK K E++ Sbjct: 108 RTMRQMMDTMDRLFEDTMTFPGSRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRNYSSYDTRLSLPDNVDK-DKVKAELKNGVLLISIPKTKVEKK 234 The following BLAST results are available for this feature:
BLAST of FC930993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930993 ID=FC930993; Name=FC930993; organism=Citrus clementina; type=EST; length=692bpback to top |