FC931020

Overview
NameFC931020
Unique NameFC931020
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14989 contig Ccv1_Contig14989:312..1019. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA4B_ORYSJ (Heat stress transcription factor A-4b OS=Oryza sativa subsp. japonica GN=HSFA4B PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.729e-38
Identity = 92/227 (40.53%), Postives = 131/227 (57.71%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHS--TQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSKKRRLLRPTTIEYFDDVKSASLSVNEQKENP-DATSDPSPALNLEQIDRLESSVDFWTFFLYGLGEAFNQDV-YDFGVLRPVSAVTDDEIEEGVSSE 690
            YGFRK+DP+QWEFANE+FI+GQRH LKNIHRRKP+ SHS  +Q   PLT+ ER ++E +IERLK +N+                E  +Q++ E+L  +E++Q  +I+ +  ++K PGF S+  QQ + H KKRRL  P  I + +D      +  E +  P D T+ P+     E  D++ESS++    FL    E F  D+ YD GV  P S V   E+     S+
Sbjct:   71 YGFRKVDPEQWEFANEDFIKGQRHRLKNIHRRKPIFSHSSHSQGAGPLTDNERKDYEEEIERLKSDNAALSSELQNNTLKKLNMEKRMQALEEKLFVVEDQQRSLISYVREIVKAPGFLSSFVQQQDHHRKKRRL--PIPISFHEDA-----NTQENQIMPCDLTNSPAQTFYRESFDKMESSLNSLENFLREASEEFGNDISYDDGVPGPSSTVVLTELHSPGESD 290          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA4A_ARATH (Heat stress transcription factor A-4a OS=Arabidopsis thaliana GN=HSFA4A PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.518e-31
Identity = 75/189 (39.68%), Postives = 109/189 (57.67%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQS----PTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQ-QAEVHSKKRRLLRPTTIEYFDDVKSASLSVNEQKENPDATSDPSPALNLEQIDRLESSVDFW 573
            YGFRK DP+QWEFAN++F+RGQ HL+KNIHRRKPVHSHS  +      PLT++ER     +IERL KE                 FE  V+ ++ERL+++E RQ  M++ ++ +L+KPG +  L+    E + +KRR  R   IE+F D      +        + ++ PS      Q+++LESS+  W
Sbjct:   74 YGFRKADPEQWEFANDDFVRGQPHLMKNIHRRKPVHSHSLPNLQAQLNPLTDSERVRMNNQIERLTKEKEGLLEELHKQDEEREVFEMQVKELKERLQHMEKRQKTMVSFVSQVLEKPGLALNLSPCVPETNERKRRFPR---IEFFPDEPMLEENKTCVVVREEGSTSPSSHTREHQVEQLESSIAIW 259          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA4C_ARATH (Heat stress transcription factor A-4c OS=Arabidopsis thaliana GN=HSFA4C PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.327e-30
Identity = 69/187 (36.90%), Postives = 106/187 (56.68%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHS---TQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSKKRRLLRPTTIEYFDDVKSASLSVNEQKENPDATSDPSPALNLEQIDRLESSVDFW 573
            YGFRK+DP++WEF N++F+RG+ +L+KNIHRRKPVHSHS    Q+  PLTE+ER   E +IERLK E                EFE  V ++++RL+++E  Q  ++A ++ +L KPG S  L    E H +++R  +  ++                         P  + ++EQ+++LESS+ FW
Sbjct:   72 YGFRKVDPEKWEFLNDDFVRGRPYLMKNIHRRKPVHSHSLVNLQAQNPLTESERRSMEDQIERLKNEKEGLLAELQNQEQERKEFELQVTTLKDRLQHMEQHQKSIVAYVSQVLGKPGLSLNL----ENHERRKRRFQENSL-------------------------PPSSSHIEQVEKLESSLTFW 229          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA4D_ORYSJ (Heat stress transcription factor A-4d OS=Oryza sativa subsp. japonica GN=HSFA4D PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.018e-27
Identity = 82/193 (42.49%), Postives = 109/193 (56.48%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPT--PLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPG--FSSALNQQAEVHSKKRRLLRPTTIEYFDDVKSASLSVNEQKE------NPDATSDPS--PALNLEQIDRLESSV 564
            YGFRKIDP++WEFANE+FIRG  HLLKNIHRRKPVHSHS Q+    PL E+ER E E +I RLK E S             +   + +Q++  RL  +E RQ  ++A L  +L++ G   SS+L  +++  SKKRR+  P    + DD  +      EQK         DA + P   P  N E  DR+E S+
Sbjct:   79 YGFRKIDPERWEFANEDFIRGHTHLLKNIHRRKPVHSHSLQNQINGPLAESERRELEEEINRLKYEKSILVADLQRQNQQQYVINWQMQAMEGRLVAMEQRQKNIVASLCEMLQRRGGAVSSSL-LESDHFSKKRRV--PKMDLFVDDCAAG----EEQKVFQFQGIGTDAPAMPPVLPVTNGEAFDRVELSL 264          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HSFA5_ORYSJ (Heat stress transcription factor A-5 OS=Oryza sativa subsp. japonica GN=HSFA5 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.295e-26
Identity = 71/163 (43.56%), Postives = 89/163 (54.60%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHS-------KKRRL-------LRPTTIEYFDDVKSAS 468
            YGFRKIDP++WEFANE FI+GQ+HLLKNIHRRKP+HSHS   P  L + ER  FE +IERL +E S                   ++ +  R+  +E RQT+MIA L    K P F + L + AE  S       KKRRL           T  ++DD  S S
Sbjct:   81 YGFRKIDPERWEFANEYFIKGQKHLLKNIHRRKPIHSHS-HPPGALPDNERAIFEDEIERLSREKSNLQADLWKSKQQQSGTMNQIEDLERRVLGMEQRQTKMIAFLQQASKNPQFVNKLVKMAEASSIFTDAFNKKRRLPGLDYSIENTETTSFYDDHSSTS 242          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA2B_ORYSJ (Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica GN=HSFA2B PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.828e-24
Identity = 84/242 (34.71%), Postives = 125/242 (51.65%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHST---QSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVH-------SKKRRLLRPTTIEYFDDVKSASLSVNEQKENPDATSDPSPALNLEQIDRLESSVDFWTFFLYGLGEAFNQDV--YDFGVLRPVSAVTD----DEIEEGVSSEEHD 699
            YGFRK+DPD+WEFANE F+RGQRHLLKNI RRKP  SH+    QS  P  E     ++A+I+RLK++                  + +++++ +RL+  E RQ QM+A LA ++K P F   L  Q E+        SKKRR      I+   +V     S + ++E+P A  DP  ++    ID + S ++       GL E  + DV   +   + P   + D    + + EG+  EE+D
Sbjct:  111 YGFRKVDPDRWEFANENFLRGQRHLLKNIKRRKP-PSHTASNQQSLGPYLEVGHFGYDAEIDRLKRDKQLLMAEVVKLRQEQQNTKANLKAMEDRLQGTEQRQQQMMAFLARVMKNPEFLKQLMSQNEMRKELQDAISKKRR----RRIDQGPEVDDVGTSSSIEQESP-ALFDPQESVEF-LIDGIPSDLENSAMDAGGLVEPQDFDVGASEQQQIGPQGELNDNFWEELLNEGLVGEEND 345          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA2C_ORYSJ (Heat stress transcription factor A-2c OS=Oryza sativa subsp. japonica GN=HSFA2C PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.391e-22
Identity = 67/170 (39.41%), Postives = 90/170 (52.94%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHS---HSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVH-------SKKRRLLRP-TTIEYFDDVKSASLSVNEQKENP 498
            YGFRK+DPD+WEFANE F+RGQRHLLK I RRKP  +      QS T   E     FE +I+RLK++ +                + HV+++ +RLR  E +Q QM+  LA  ++ P F   L QQ E         SKKRR  RP   + ++D       S  EQ ++P
Sbjct:  101 YGFRKVDPDRWEFANEGFLRGQRHLLKTIKRRKPPSNAPPSQQQSLTSCLEVGEFGFEEEIDRLKRDKNILITEVVKLRQEQQATKDHVKAMEDRLRAAEQKQVQMMGFLARAMRNPEFFQQLAQQKEKRKELEDAISKKRR--RPIDNVPFYD---PGETSQTEQLDSP 265          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HSFA1_ORYSJ (Heat stress transcription factor A-1 OS=Oryza sativa subsp. japonica GN=HSFA1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.142e-21
Identity = 71/198 (35.86%), Postives = 107/198 (54.04%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHS-------TQSPTP-LTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAE-------VHSKKRRLLRPTTIEYFDDVKSASLSVNEQKENPDATSDPSPALNLEQIDRLESSVDF 570
            YGFRK+DPD+WEFANE F+RGQ+HLLK I+RRKP H ++         +P P   E  +   E +IE LK++ +                ++ +Q++ +RL+ +E RQ QM++ LA  +  PGF +   QQ E         +KKRRL +    +   D +SASL     K  P   ++ + A+ L +I +L+SS  F
Sbjct:   96 YGFRKVDPDRWEFANEGFLRGQKHLLKTINRRKPTHGNNQVQQPQLPAAPVPACVEVGKFGMEEEIEMLKRDKNVLMQELVRLRQQQQTTDHQLQTLGKRLQGMEQRQQQMMSFLAKAMHSPGFLAQFVQQNENSRRRIVASNKKRRLPKQ---DGSLDSESASLDGQIVKYQP-MINEAAKAM-LRKILKLDSSHRF 288          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HSFA5_ARATH (Heat stress transcription factor A-5 OS=Arabidopsis thaliana GN=HSFA5 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20
Identity = 50/138 (36.23%), Postives = 80/138 (57.97%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAE-----VHSKKRRL 420
            YGFRKIDP++WEF N++FI+ Q+HLLKNIHRRKP+HSHS   P   T+ ER   + ++++L +E +                ++  + + E +  +ENRQ +++  L   ++ P F     ++ E      ++KKRRL
Sbjct:   82 YGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRKPIHSHS-HPPASSTDQERAVLQEQMDKLSREKAAIEAKLLKFKQQKVVAKHQFEEMTEHVDDMENRQKKLLNFLETAIRNPTFVKNFGKKVEQLDISAYNKKRRL 218          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA1E_ARATH (Heat stress transcription factor A-1e OS=Arabidopsis thaliana GN=HSFA1E PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.685e-20
Identity = 60/167 (35.93%), Postives = 88/167 (52.69%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPT-------PLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGF-------SSALNQQAEVHSKKRRLLRPTTIEYFDDVKSASLSVN 480
            YGFRK+DPD+WEFANE F+RGQ+ +LK+I RRKP      Q P           E  +   E ++ERL+++ +                E+H+Q+V +++  +E RQ QM++ LA  ++ PGF       S+  NQ     +KKRRL     +E  D + S S  VN
Sbjct:   82 YGFRKVDPDRWEFANEGFLRGQKQILKSIVRRKPAQVQPPQQPQVQHSSVGACVEVGKFGLEEEVERLQRDKNVLMQELVRLRQQQQVTEHHLQNVGQKVHVMEQRQQQMMSFLAKAVQSPGFLNQFSQQSNEANQHISESNKKRRL----PVE--DQMNSGSHGVN 242          
The following BLAST results are available for this feature:
BLAST of FC931020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
HFA4B_ORYSJ3.729e-3840.53Heat stress transcription factor A-4b OS=Oryza sat... [more]
HFA4A_ARATH1.518e-3139.68Heat stress transcription factor A-4a OS=Arabidops... [more]
HFA4C_ARATH8.327e-3036.90Heat stress transcription factor A-4c OS=Arabidops... [more]
HFA4D_ORYSJ1.018e-2742.49Heat stress transcription factor A-4d OS=Oryza sat... [more]
HSFA5_ORYSJ7.295e-2643.56Heat stress transcription factor A-5 OS=Oryza sati... [more]
HFA2B_ORYSJ6.828e-2434.71Heat stress transcription factor A-2b OS=Oryza sat... [more]
HFA2C_ORYSJ6.391e-2239.41Heat stress transcription factor A-2c OS=Oryza sat... [more]
HSFA1_ORYSJ4.142e-2135.86Heat stress transcription factor A-1 OS=Oryza sati... [more]
HSFA5_ARATH2.056e-2036.23Heat stress transcription factor A-5 OS=Arabidopsi... [more]
HFA1E_ARATH2.685e-2035.93Heat stress transcription factor A-1e OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionC34100E09EF PostHarvP1 Citrus clementina cDNA clone C34100E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931020 ID=FC931020; Name=FC931020; organism=Citrus clementina; type=EST; length=708bp
CTGGCCGGGGGAGCTGAATAATATGGATTCAGGAAGATTGATCCTGATCA
GTGGGAGTTTGCAAATGAGGAATTCATACGAGGACAGAGGCATCTCTTAA
AGAACATTCACAGACGCAAGCCAGTTCACAGCCATTCCACGCAGTCTCCC
ACTCCACTAACCGAAACGGAAAGAAATGAATTCGAGGCCAAAATTGAGAG
ACTCAAAAAGGAGAATAGCTTACTTCAATTAGAGCTGCGGAGGCGTGAGG
GTGGAAATCACGAGTTTGAGTATCATGTTCAATCAGTACGCGAGCGTCTA
AGGTACTTGGAAAATCGACAGACGCAAATGATCGCCTGTTTAGCTAACCT
GTTGAAGAAACCGGGATTTTCCTCGGCTCTTAATCAACAAGCAGAAGTTC
ACAGCAAAAAGAGAAGGCTGTTGAGGCCTACGACTATTGAATACTTTGAT
GATGTAAAATCCGCAAGCCTAAGTGTGAATGAACAGAAAGAGAACCCAGA
TGCTACTTCTGATCCATCTCCGGCGTTGAATTTGGAACAAATTGACAGGC
TAGAATCCTCAGTGGACTTTTGGACATTTTTTTTGTACGGCCTTGGGGAA
GCTTTTAATCAAGATGTGTACGATTTTGGGGTATTACGACCAGTGTCTGC
TGTCACCGATGATGAAATTGAAGAGGGTGTGTCATCAGAAGAACACGATG
TGTTATCA
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