FC931062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931062 vs. ExPASy Swiss-Prot
Match: Y615_SYNY3 (UPF0016 membrane protein sll0615 OS=Synechocystis sp. (strain PCC 6803) GN=sll0615 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-27 Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 1 Query: 454 IFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKIS 636 I +ESF LTF+AEWGDR+QIATIALA NA GV+ GA +GHTIC +AV+GG +A +IS Sbjct: 121 IVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGGKFVAGRIS 181 HSP 2 Score: 60.4622 bits (145), Expect = 2.716e-27 Identity = 35/95 (36.84%), Postives = 54/95 (56.84%), Query Frame = 3 Query: 84 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFWAAVTIHSLDVRSKIRSEE 368 AF A +I VSE+GD+TF IA ++AMR+P+ VL G + L MT+LS +G+I L +R + N A L+ F + + +++ EE Sbjct: 4 AFTAGLLLITVSELGDKTFFIAMILAMRYPRRWVLVGVVGGLAAMTILSVLMGQIFTFLPTR-YINYAEVALFLIFGTKLLWDARRIKATANLEE 97 HSP 3 Score: 20.4014 bits (41), Expect = 2.716e-27 Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 2 Query: 653 IGGLLFFAFPV 685 IGGLLF+ F V Sbjct: 188 IGGLLFYLFAV 198
BLAST of FC931062 vs. ExPASy Swiss-Prot
Match: TM165_RAT (Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.443e-17 Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 1 Query: 451 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKIS 636 PIF+++ LTFLAEWGDRSQ+ TI LA ++ GVAVG T+GH +CT LAV+GG M+A KIS Sbjct: 234 PIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKIS 295 HSP 2 Score: 74.3294 bits (181), Expect = 7.339e-13 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 3 Query: 63 SGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFF 311 + LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +T L+A F Sbjct: 89 ANLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFG-YATTVIPRVYTYYVSTALFAIF 170
BLAST of FC931062 vs. ExPASy Swiss-Prot
Match: TM165_MOUSE (Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 8.443e-17 Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 1 Query: 451 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKIS 636 PIF+++ LTFLAEWGDRSQ+ TI LA ++ GVAVG T+GH +CT LAV+GG M+A KIS Sbjct: 234 PIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKIS 295 HSP 2 Score: 74.3294 bits (181), Expect = 7.339e-13 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 3 Query: 63 SGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFF 311 + LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +T L+A F Sbjct: 89 TNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFG-YATTVIPRVYTYYVSTALFAIF 170
BLAST of FC931062 vs. ExPASy Swiss-Prot
Match: TM165_HUMAN (Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.443e-17 Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 1 Query: 451 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKIS 636 PIF+++ LTFLAEWGDRSQ+ TI LA ++ GVAVG T+GH +CT LAV+GG M+A KIS Sbjct: 235 PIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKIS 296 HSP 2 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 42/83 (50.60%), Postives = 58/83 (69.88%), Query Frame = 3 Query: 63 SGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFF 311 + LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +TVL+A F Sbjct: 89 TNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG-YATTVIPRVYTYYVSTVLFAIF 170
BLAST of FC931062 vs. ExPASy Swiss-Prot
Match: YD68_SCHPO (UPF0016 membrane protein C17G8.08c OS=Schizosaccharomyces pombe GN=SPAC17G8.08c PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.512e-16 Identity = 34/61 (55.74%), Postives = 48/61 (78.69%), Query Frame = 1 Query: 451 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKI 633 P+F+++F LTF++EWGDRSQIATIA+A N GV +GA +GH CT+LAV+ G +++KI Sbjct: 201 PLFIKAFALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYISTKI 261 HSP 2 Score: 24.2534 bits (51), Expect = 8.512e-16 Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 2 Query: 650 YIGGLLFFAFPVSYF 694 +IGG+LF AF + YF Sbjct: 268 FIGGILFIAFGLVYF 282 HSP 3 Score: 68.1662 bits (165), Expect = 5.260e-11 Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 3 Query: 84 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFWAAVTIHSLDV 344 + I S SMI EIGD+TFI+AAL+A + + TV +G+ SALF+MT+L LG P L RK T+ VL+ F + + + +V Sbjct: 49 SLIFSISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLGHAAPLLFPRKLTDILGGVLFVIFGIKMLMEAKEV 135
BLAST of FC931062 vs. ExPASy Swiss-Prot
Match: YB37_YEAST (UPF0016 membrane protein YBR187W OS=Saccharomyces cerevisiae GN=YBR187W PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12 Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 3 Query: 84 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFWAAVTIHSLDVRSKIRSEE 368 +F+ S SMI +SEIGD+TF+IAALMAMRH + V S A ++L +MT+LS +G +S ++T A +L+ F +T+ L++ EE Sbjct: 41 SFLMSVSMIGLSEIGDKTFLIAALMAMRHKRVLVFSAAATSLAIMTILSGVVGHSAVAFLSERYTAFFAGILFLVFGYKLTMEGLEMSKDAGVEE 135 HSP 2 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1 Query: 451 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKIS 636 P++++ F++ FL E GDRSQI+ IA+AT + V GA IGH IC+ LAVVGG +LA++IS Sbjct: 191 PVWVQIFLMVFLGELGDRSQISIIAMATDSDYWYVIAGAVIGHAICSGLAVVGGKLLATRIS 252 The following BLAST results are available for this feature:
BLAST of FC931062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931062 ID=FC931062; Name=FC931062; organism=Citrus clementina; type=EST; length=729bpback to top |