FC931158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931158 vs. ExPASy Swiss-Prot
Match: SRR35_HUMAN (35 kDa SR repressor protein OS=Homo sapiens GN=SRRP35 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17 Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 465 SL +RN+ RPE+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A +++N K GR+I + A RK P +M+ + R Sbjct: 11 SLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
BLAST of FC931158 vs. ExPASy Swiss-Prot
Match: SF13A_MOUSE (Splicing factor, arginine/serine-rich 13A OS=Mus musculus GN=Sfrs13a PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQR 459 SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H+++ K GR+I + A RK P +M+ + Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
BLAST of FC931158 vs. ExPASy Swiss-Prot
Match: SF13A_HUMAN (Splicing factor, arginine/serine-rich 13A OS=Homo sapiens GN=SFRS13A PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQR 459 SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H+++ K GR+I + A RK P +M+ + Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
BLAST of FC931158 vs. ExPASy Swiss-Prot
Match: SFRS2_RAT (Splicing factor, arginine/serine-rich 2 OS=Rattus norvegicus GN=Sfrs2 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 432 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A R Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
BLAST of FC931158 vs. ExPASy Swiss-Prot
Match: SFRS2_PIG (Splicing factor, arginine/serine-rich 2 OS=Sus scrofa GN=SFRS2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 432 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A R Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
BLAST of FC931158 vs. ExPASy Swiss-Prot
Match: SFRS2_PANTR (Splicing factor, arginine/serine-rich 2 OS=Pan troglodytes GN=SFRS2 PE=2 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 432 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A R Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
BLAST of FC931158 vs. ExPASy Swiss-Prot
Match: SFRS2_MOUSE (Splicing factor, arginine/serine-rich 2 OS=Mus musculus GN=Sfrs2 PE=1 SV=4) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 432 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A R Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
BLAST of FC931158 vs. ExPASy Swiss-Prot
Match: SFRS2_HUMAN (Splicing factor, arginine/serine-rich 2 OS=Homo sapiens GN=SFRS2 PE=1 SV=4) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 432 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A R Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
BLAST of FC931158 vs. ExPASy Swiss-Prot
Match: SFRS2_CHICK (Splicing factor, arginine/serine-rich 2 OS=Gallus gallus GN=SFRS2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 432 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A R Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
BLAST of FC931158 vs. ExPASy Swiss-Prot
Match: SFRS2_BOVIN (Splicing factor, arginine/serine-rich 2 OS=Bos taurus GN=SFRS2 PE=2 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 432 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A R Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94 The following BLAST results are available for this feature:
BLAST of FC931158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931158 ID=FC931158; Name=FC931158; organism=Citrus clementina; type=EST; length=730bpback to top |