FC931218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931218 vs. ExPASy Swiss-Prot
Match: RL141_ARATH (60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.397e-36 Identity = 47/54 (87.04%), Postives = 48/54 (88.89%), Query Frame = 3 Query: 3 DQNRALVDAPDMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWE 164 DQNRALVDAPDM R QMN KRLSLTDI IDI RVPKKK LI+AMEKADVKNKWE Sbjct: 32 DQNRALVDAPDMERIQMNLKRLSLTDIVIDINRVPKKKVLIEAMEKADVKNKWE 85 HSP 2 Score: 78.1814 bits (191), Expect = 3.397e-36 Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 2 Query: 167 SSWGRKLIVQKKTASLNDFDRFKLMLAKIKKGGLVRQELAKLMNENAA 310 SSWGRKLIVQK+ A+LNDFDRFK+MLAKIK+ G+VRQELAKL E AA Sbjct: 87 SSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGIVRQELAKLKREIAA 134
BLAST of FC931218 vs. ExPASy Swiss-Prot
Match: RL14_PEA (Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.469e-31 Identity = 42/53 (79.25%), Postives = 45/53 (84.91%), Query Frame = 3 Query: 3 DQNRALVDAPDMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKW 161 DQ RALVDAPDM R +NFKRLSLTD+KIDI RVPKKK LI A+E ADVKNKW Sbjct: 32 DQTRALVDAPDMERSPINFKRLSLTDLKIDIKRVPKKKDLIKALEAADVKNKW 84 HSP 2 Score: 67.3958 bits (163), Expect = 6.469e-31 Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = 2 Query: 167 SSWGRKLIVQKKTASLNDFDRFKLMLAKIKKGGLVRQELAKL 292 SSWGRKLIV+K A+LNDFDRFK+MLAKIK+ VRQELAKL Sbjct: 87 SSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAGVRQELAKL 128
BLAST of FC931218 vs. ExPASy Swiss-Prot
Match: RL142_ARATH (60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.298e-19 Identity = 50/71 (70.42%), Postives = 57/71 (80.28%), Query Frame = 3 Query: 3 DQNRALVDAPDMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWEVALGEES*LFRRRQHHL 215 DQNRALVDAPDM R QMNFKRLSLTDI IDI RVPKKK LI+AMEKADVKNKWE + + ++R+ +L Sbjct: 32 DQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANL 102 HSP 2 Score: 77.411 bits (189), Expect = 6.241e-14 Identity = 38/48 (79.17%), Postives = 42/48 (87.50%), Query Frame = 2 Query: 167 SSWGRKLIVQKKTASLNDFDRFKLMLAKIKKGGLVRQELAKLMNENAA 310 SSWGRKLIVQK+ A+LNDFDRFK+MLAKIKK G+VRQELAKL E A Sbjct: 87 SSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKLKKEITA 134
BLAST of FC931218 vs. ExPASy Swiss-Prot
Match: RL14_LUMRU (60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1) HSP 1 Score: 50.0618 bits (118), Expect = 8.032e-11 Identity = 26/56 (46.43%), Postives = 32/56 (57.14%), Query Frame = 3 Query: 3 DQNRALVDAP--DMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWE 164 DQNRALVD P + R MNFK L LT++K P K + A EK ++ KWE Sbjct: 32 DQNRALVDGPCTHVARKSMNFKELELTNLKAKFPHSAKTGVVKKAWEKDEISKKWE 87 HSP 2 Score: 35.8094 bits (81), Expect = 8.032e-11 Identity = 17/42 (40.48%), Postives = 26/42 (61.90%), Query Frame = 2 Query: 167 SSWGRKLIVQKKTASLNDFDRFKLMLAKIKKGGLVRQELAKL 292 S +K+ ++K +L DF+RFKLM AK + L++ E KL Sbjct: 89 SHLAKKIAAKEKRKTLTDFERFKLMKAKQARNRLIKIEFGKL 130 The following BLAST results are available for this feature:
BLAST of FC931218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931218 ID=FC931218; Name=FC931218; organism=Citrus clementina; type=EST; length=609bpback to top |