FC931223
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_STAPU (Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum punctulatum GN=pdhB PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.432e-43 Identity = 81/91 (89.01%), Postives = 87/91 (95.60%), Query Frame = 3 Query: 411 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNR 683 E+LLFEALREGL+EEMDRDP V VMGEDVGHYGGSYKVTKG A+KYGDLR+LDTPIAENSFTGM IGAAMTGLRP+VEGMNMGFLLLAFN+ Sbjct: 3 EMLLFEALREGLQEEMDRDPKVLVMGEDVGHYGGSYKVTKGFAEKYGDLRLLDTPIAENSFTGMAIGAAMTGLRPVVEGMNMGFLLLAFNQ 93 HSP 2 Score: 26.5646 bits (57), Expect = 1.432e-43 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 691 HCGMLHYTSGGQFT 732 + GMLHYTSG FT Sbjct: 97 NAGMLHYTSGANFT 110
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_ZYGCR (Pyruvate dehydrogenase E1 component subunit beta OS=Zygnema circumcarinatum GN=pdhB PE=3 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 1.432e-43 Identity = 79/91 (86.81%), Postives = 87/91 (95.60%), Query Frame = 3 Query: 411 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNR 683 E+LLFEALR+GL+EEMDRDP V VMGEDVGHYGGSYKVTKG A++YGDLR+LDTPIAENSFTGM IGAAMTGLRP+VEGMNMGFLLLAFN+ Sbjct: 3 EVLLFEALRQGLQEEMDRDPRVMVMGEDVGHYGGSYKVTKGFAERYGDLRLLDTPIAENSFTGMAIGAAMTGLRPVVEGMNMGFLLLAFNQ 93 HSP 2 Score: 28.8758 bits (63), Expect = 1.432e-43 Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 1 Query: 691 HCGMLHYTSGGQFT 732 + GMLHYTSGG FT Sbjct: 97 NAGMLHYTSGGNFT 110
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_CHAGL (Pyruvate dehydrogenase E1 component subunit beta OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.853e-41 Identity = 78/91 (85.71%), Postives = 84/91 (92.31%), Query Frame = 3 Query: 411 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNR 683 E+LLFEALR+ L+EEM RDP V VMGEDVGHYGGSYKVTKG +KYGDLR+LDTPIAENSFTGM IGAAMTGLRPIVEGMNMGFLLLAFN+ Sbjct: 3 EVLLFEALRDALDEEMQRDPSVLVMGEDVGHYGGSYKVTKGFHEKYGDLRLLDTPIAENSFTGMAIGAAMTGLRPIVEGMNMGFLLLAFNQ 93 HSP 2 Score: 26.9498 bits (58), Expect = 2.853e-41 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 691 HCGMLHYTSGGQF 729 + GMLHYTSGG F Sbjct: 97 NAGMLHYTSGGNF 109
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_CHAVU (Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris GN=pdhB PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 8.898e-40 Identity = 72/91 (79.12%), Postives = 84/91 (92.31%), Query Frame = 3 Query: 411 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNR 683 E LL+EAL EG+ EE++RDP V V+GED+GHYGGSYKVTKGL +KYG+LR+LDTPIAENSFTG+ IGAAMTGLRPI+EGMNMGFLLLAFN+ Sbjct: 3 EKLLYEALNEGIHEEIERDPKVFVIGEDIGHYGGSYKVTKGLFEKYGNLRILDTPIAENSFTGIAIGAAMTGLRPIIEGMNMGFLLLAFNQ 93 HSP 2 Score: 28.8758 bits (63), Expect = 8.898e-40 Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 1 Query: 691 HCGMLHYTSGGQFT 732 + GMLHYTSGG FT Sbjct: 97 NAGMLHYTSGGNFT 110
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_PORYE (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra yezoensis GN=pdhB PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.996e-37 Identity = 71/91 (78.02%), Postives = 80/91 (87.91%), Query Frame = 3 Query: 411 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNR 683 ++ +F+ALR +EEM +DP VCV+GEDVGHYGGSYKVTK L KYGDLRVLDTPIAENSFTGM IGAA+TGLRPIVEGMNM FLLLAFN+ Sbjct: 3 KIFMFDALRAATDEEMAKDPTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQ 93 HSP 2 Score: 25.7942 bits (55), Expect = 2.996e-37 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 691 HCGMLHYTSGGQFT 732 + GML YTSGG FT Sbjct: 97 NAGMLRYTSGGNFT 110
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_CYAME (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon merolae GN=pdhB PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.997e-37 Identity = 71/92 (77.17%), Postives = 81/92 (88.04%), Query Frame = 3 Query: 408 HELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNR 683 H+L ++EALRE ++EEM RD V V+GEDVGHYGGSYKVTK L KYGDLRVLDTPIAENSFTGM IGAAMTGL+P+VEGMN+ FLLLAFN+ Sbjct: 3 HKLFMYEALREAIDEEMARDKRVFVLGEDVGHYGGSYKVTKQLHTKYGDLRVLDTPIAENSFTGMAIGAAMTGLKPVVEGMNLSFLLLAFNQ 94 HSP 2 Score: 25.409 bits (54), Expect = 2.997e-37 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1 Query: 691 HCGMLHYTSGGQFT 732 + GMLHYTSGG ++ Sbjct: 98 NAGMLHYTSGGNWS 111
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_PORPU (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra purpurea GN=pdhB PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.907e-36 Identity = 70/91 (76.92%), Postives = 80/91 (87.91%), Query Frame = 3 Query: 411 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNR 683 ++ +F+ALR +EEM++D VCV+GEDVGHYGGSYKVTK L KYGDLRVLDTPIAENSFTGM IGAA+TGLRPIVEGMNM FLLLAFN+ Sbjct: 3 KVFMFDALRAATDEEMEKDLTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQ 93 HSP 2 Score: 25.7942 bits (55), Expect = 1.907e-36 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 691 HCGMLHYTSGGQFT 732 + GML YTSGG FT Sbjct: 97 NAGMLRYTSGGNFT 110
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_GRATL (Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria tenuistipitata var. liui GN=pdhB PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.060e-35 Identity = 70/91 (76.92%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 411 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNR 683 E+L+F+ALRE +EEM D V ++GEDVGHYGGSYKVTK L KYGDLRVLDTPIAENSF GM IGAA+TGLRPIVEGMNM FLLLAFN+ Sbjct: 3 EVLMFDALREATDEEMQNDSSVFILGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFMGMAIGAAITGLRPIVEGMNMSFLLLAFNQ 93 HSP 2 Score: 23.8682 bits (50), Expect = 2.060e-35 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 1 Query: 691 HCGMLHYTSGGQF 729 + GML YTSGG F Sbjct: 97 NAGMLRYTSGGNF 109
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_CYACA (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidium caldarium GN=pdhB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.707e-34 Identity = 69/90 (76.67%), Postives = 79/90 (87.78%), Query Frame = 3 Query: 414 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNR 683 + L+EALR ++EEM +D +V ++GEDVGHYGGSYKVTK L KYGDLRVLD PIAENSFTGM IGAAMTGLRPIVEGMNMGF+LLAFN+ Sbjct: 4 MFLYEALRAAIDEEMGKDSNVFIVGEDVGHYGGSYKVTKDLHVKYGDLRVLDAPIAENSFTGMAIGAAMTGLRPIVEGMNMGFMLLAFNQ 93 HSP 2 Score: 21.1718 bits (43), Expect = 1.707e-34 Identity = 8/10 (80.00%), Postives = 8/10 (80.00%), Query Frame = 1 Query: 700 MLHYTSGGQF 729 ML YTSGG F Sbjct: 100 MLQYTSGGNF 109
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_MESVI (Pyruvate dehydrogenase E1 component subunit beta OS=Mesostigma viride GN=pdhB PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.203e-28 Identity = 59/88 (67.05%), Postives = 72/88 (81.82%), Query Frame = 3 Query: 420 LFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNR 683 LFEAL ++EEM R+ V ++GED+GHYGGSYKVT+ L KYG+ RV+DTPIAENSF G IGAAMTGL +VEGMNMGF+LLAF++ Sbjct: 6 LFEALNMAIDEEMARNDKVALLGEDIGHYGGSYKVTQNLYAKYGEHRVIDTPIAENSFVGAAIGAAMTGLVTVVEGMNMGFILLAFSQ 93 The following BLAST results are available for this feature:
BLAST of FC931223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931223 ID=FC931223; Name=FC931223; organism=Citrus clementina; type=EST; length=736bpback to top |