FC931283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2) HSP 1 Score: 384.03 bits (985), Expect = 3.805e-106 Identity = 180/224 (80.36%), Postives = 203/224 (90.62%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDG 672 DVGIAEQHAVTFAAGLA EG+KPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFD+T+M+CLPNMVVMAPSDEAEL HMVATAA IDDRPSCFR+PRGNGIG LPPN KG PLE+GKGR+L+EG+RVA+LGYGS VQ C+ AA++++ + VTVADARFCKPLD LIR+LA+ HE+L+TVEEGS+GGFGSHV F+ L G+LDG Sbjct: 441 DVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMALDGLLDG 664
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1) HSP 1 Score: 379.022 bits (972), Expect = 1.224e-104 Identity = 179/224 (79.91%), Postives = 201/224 (89.73%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDG 672 DVGIAEQHAVTFAAGLA EG+KPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFD+TFM+CLPNMVVMAPSDEAEL H+VATAA IDDRPSCFR+PRGNGIG LP NKG PLE+GKGRIL+EG+RVA+LGYGS VQ C+ AA++L+S+ + VTVADARFCKPLD LIR LA HE+L+TVE+GS+GGFGSHV F+ L G+LDG Sbjct: 444 DVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFHIVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKGRILVEGERVALLGYGSAVQNCLAAASVLESRGLQVTVADARFCKPLDRALIRSLAKSHEVLVTVEKGSIGGFGSHVVQFMALDGLLDG 667
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_ARATH (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=CLA1 PE=1 SV=2) HSP 1 Score: 378.252 bits (970), Expect = 2.088e-104 Identity = 180/224 (80.36%), Postives = 199/224 (88.84%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDG 672 DVGIAEQHAVTFAAGLA EG+KPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFD+TFM+CLPNM+VMAPSDEA+L +MVATA IDDRPSCFR+PRGNGIG LPP NKG P+EIGKGRIL EG+RVA+LGYGS VQ C+ AA ML+ + ++VTVADARFCKPLD LIR LA HE+LITVEEGS+GGFGSHV FL L G+LDG Sbjct: 445 DVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDG 668
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_BRAJA (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium japonicum GN=dxs PE=3 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.032e-83 Identity = 149/223 (66.82%), Postives = 180/223 (80.72%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLASEG KPFCAIYS+FLQRGYDQ+VHDV +Q LPVRFA+DRAGLVGADG TH G+FD ++ CLPNMV+MA +DEAEL+HMVAT IDDRPS R+PRG G G +P G PLEIGKGR++ +G ++A+L +G+ + +C AA+ L + +S T+ADARF KPLDT+L+ +LA +HEILIT+EEGSVGGFGSHV FLT G LD Sbjct: 386 DVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPSSLRYPRGEGRGIEMP--EVGIPLEIGKGRMIRQGSKIALLSFGTRLAECEKAADELAAHGLSTTIADARFMKPLDTELVLKLARDHEILITIEEGSVGGFGSHVAQFLTDQGALD 606
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_BRUSU (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis GN=dxs PE=3 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 5.911e-83 Identity = 152/223 (68.16%), Postives = 179/223 (80.27%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD Sbjct: 365 DVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLD 585
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_BRUSI (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=dxs PE=3 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 5.911e-83 Identity = 152/223 (68.16%), Postives = 179/223 (80.27%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD Sbjct: 365 DVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGATGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLD 585
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_BRUME (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis GN=dxs PE=3 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 5.911e-83 Identity = 152/223 (68.16%), Postives = 179/223 (80.27%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD Sbjct: 365 DVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLD 585
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_BRUMB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=dxs PE=3 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 5.911e-83 Identity = 152/223 (68.16%), Postives = 179/223 (80.27%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD Sbjct: 365 DVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLD 585
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_BRUC2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=dxs PE=3 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 5.911e-83 Identity = 152/223 (68.16%), Postives = 179/223 (80.27%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD Sbjct: 365 DVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLD 585
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_RHOPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=dxs PE=3 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 1.720e-82 Identity = 150/224 (66.96%), Postives = 179/224 (79.91%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDG 672 DVGIAEQHAVTFAAGLA+EG KPFCAIYS+FLQR YDQVVHDV LQ LPVRFA+DRAGLVGADG TH G+FD ++ CLPNMV+MA SDEAEL+HMVAT I+DRPS R+PRG G G +P + G PLEIGKGR++ +G++VA+L +G+ + +C AA L + +S TVADARF KPLD DL+ +LANEHEILIT+EEGS+GGFG+HV L G LDG Sbjct: 364 DVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRAYDQVVHDVALQSLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAINDRPSALRYPRGEGRGVEMP--DVGVPLEIGKGRVIRQGNKVALLSFGTRLAECEKAAEELAALGLSTTVADARFMKPLDVDLVLKLANEHEILITIEEGSIGGFGTHVMQTLAEHGKLDG 585 The following BLAST results are available for this feature:
BLAST of FC931283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931283 ID=FC931283; Name=FC931283; organism=Citrus clementina; type=EST; length=677bpback to top |