FC931333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_SOLLC (60S ribosomal protein L8 OS=Solanum lycopersicum GN=RPL8 PE=2 SV=1) HSP 1 Score: 425.246 bits (1092), Expect = 4.188e-120 Identity = 199/210 (94.76%), Postives = 208/210 (99.05%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIRAQRKGAGSVFKSHTHHRKGPARFR+LDFGERNGYLKGVITE+IHDPGRGAPLARVTFRHPFRY+HQKELFVAAEGMYTGQFVYCG+KATL+VGNVLPLRSIPEGAVVCNVEH VGDRGVFARCSGDYA+VISHNPDN TTR+KLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHP Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLARVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKVGDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHP 210 HSP 2 Score: 28.1054 bits (61), Expect = 4.188e-120 Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 696 HGGGNHSTLA-CSTVRRDA 749 HGGGNH + STVRRDA Sbjct: 211 HGGGNHQHIGHASTVRRDA 229
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL83_ARATH (60S ribosomal protein L8-3 OS=Arabidopsis thaliana GN=RPL8C PE=2 SV=2) HSP 1 Score: 417.157 bits (1071), Expect = 1.119e-117 Identity = 194/210 (92.38%), Postives = 207/210 (98.57%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGV+TEIIHDPGRGAPLARV FRHPFR++ QKELFVAAEGMYTGQF+YCG+KATLVVGNVLPLRSIPEGAV+CNVEHHVGDRGVFAR SGDYA+VI+HNPDNDT+RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHP Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHVGDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHP 210 HSP 2 Score: 28.1054 bits (61), Expect = 1.119e-117 Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 696 HGGGNHSTLA-CSTVRRDA 749 HGGGNH + STVRRDA Sbjct: 211 HGGGNHQHIGHASTVRRDA 229
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL81_ARATH (60S ribosomal protein L8-1 OS=Arabidopsis thaliana GN=RPL8A PE=2 SV=2) HSP 1 Score: 412.92 bits (1060), Expect = 2.089e-116 Identity = 194/210 (92.38%), Postives = 206/210 (98.10%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGV+TEIIHDPGRGAPLARVTFRHPFR++ QKELFVAAEGMYTGQF+YCG+KATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGV AR SGDYA+VI+HNPD+DTTRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRN WPKVRGVAMNPVEHP Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNSWPKVRGVAMNPVEHP 210 HSP 2 Score: 28.1054 bits (61), Expect = 2.089e-116 Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 696 HGGGNHSTLA-CSTVRRDA 749 HGGGNH + STVRRDA Sbjct: 211 HGGGNHQHIGHASTVRRDA 229
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_TOBAC (60S ribosomal protein L8 OS=Nicotiana tabacum GN=RPL8 PE=2 SV=1) HSP 1 Score: 416.772 bits (1070), Expect = 6.405e-116 Identity = 196/210 (93.33%), Postives = 205/210 (97.62%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGR+IRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITE+IHDPGRGAPLARVTFR+PFRY HQKELFVAAEGMYTGQFVYCG+KATL+VGNVLPLRSIPEGAVVCNVEH VGDRGVFARCSG YA+VISHNPDN TTRIKLPSG+KKIVPSGCR MIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHP Sbjct: 1 MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLARVTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKVGDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL82_ARATH (60S ribosomal protein L8-2 OS=Arabidopsis thaliana GN=RPL8B PE=2 SV=2) HSP 1 Score: 382.489 bits (981), Expect = 8.122e-107 Identity = 178/211 (84.36%), Postives = 197/211 (93.36%), Query Frame = 1 Query: 67 MGRVIRAQRKGA-GSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIRAQRKGA GSVFKSHTHHRKGPA+FRSLD+GERNGYLKG++TEIIHDPGRGAPLARV FRHPFRY QKELFVAAEGMYTGQ++YCG+KA L+VGNVLPL SIPEGAV+CNVE HVGDRG AR SGDYA+VI+HNP+++TTR+KLPSG+KKI+PS CRAMIGQVAGGGRTEKP LKAGNAYHK++ KRNCWP VRGVAMNPVEHP Sbjct: 1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLARVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPFLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHP 211 HSP 2 Score: 26.5646 bits (57), Expect = 8.122e-107 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 3 Query: 696 HGGGNHSTLA-CSTVRRD 746 HGGGNH + STVRRD Sbjct: 212 HGGGNHQHIGHASTVRRD 229
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_ANOGA (60S ribosomal protein L8 OS=Anopheles gambiae GN=RpL8 PE=2 SV=2) HSP 1 Score: 323.939 bits (829), Expect = 5.651e-88 Identity = 150/210 (71.43%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIRAQRKGAGSVF++HT RKG + R LD+ ER+GYLKGV+ +IIHDPGRGAPLA V FR P+R++ K+LF+AAEGMYTGQFVYCGR+A L +GNVLP+ +PEG +VCN+E GDRG AR SG+YA VI+HNPD TR+KLPSGAKK++PS RAMIG VAGGGR +KP+LKAG AYHK++VKRNCWPKVRGVAMNPVEHP Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKGEPKLRHLDYAERHGYLKGVVKQIIHDPGRGAPLAVVNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVLPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMIGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_DROME (60S ribosomal protein L8 OS=Drosophila melanogaster GN=RpL8 PE=2 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 9.638e-88 Identity = 150/210 (71.43%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIRAQRKGAGSVFK+H RKG A+ RSLDF ER+GY++GV+ +IIHDPGRGAPLA V FR P+RY+ +KELF+A EGM+TGQFVYCGRKATL +GNV+PL +PEG ++CN+E GDRG AR SG+YA VI+HN D TR+KLPSGAKK+VPS RAM+G VAGGGR +KP+LKAG AYHK++VKRN WPKVRGVAMNPVEHP Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_XENLA (60S ribosomal protein L8 OS=Xenopus laevis GN=rpl8 PE=2 SV=3) HSP 1 Score: 318.161 bits (814), Expect = 3.101e-86 Identity = 143/210 (68.10%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIR QRKGAGSVFK+H HRKG A+ R++DF ERNGY+KG++ +IIHDPGRGAPLA+V FR P+R++ + ELFVAAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC VE GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAIDFAERNGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_SPOFR (60S ribosomal protein L8 OS=Spodoptera frugiperda GN=RpL8 PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 3.101e-86 Identity = 146/210 (69.52%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIRAQRKGAGSVF SHT RKG + RSLD+ ER+GY+KGV+ +IIHDPGRGAPLA V FR P++++ +KELF+A EG+YTGQFVYCG+KATL VGNV+P+ ++PEG +VCN+E +GDRG AR SG++A VI HNPD TR+KLPSGAKK++PS R M+G VAGGGR +KP+LKAG AYHK++VKRNCWP VRGVAMNPVEHP Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHP 210
BLAST of FC931333 vs. ExPASy Swiss-Prot
Match: RL8_MAMBR (60S ribosomal protein L8 OS=Mamestra brassicae GN=RpL8 PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 3.101e-86 Identity = 146/210 (69.52%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 67 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 696 MGRVIRAQRKGAGSVF SHT RKG + RSLD+ ER+GY+KGV+ +IIHDPGRGAPLA V FR P++++ +KELF+A EG+YTGQFVYCG+KATL VGNV+P+ ++PEG +VCN+E +GDRG AR SG++A VI HNPD TR+KLPSGAKK++PS R M+G VAGGGR +KP+LKAG AYHK++VKRNCWP VRGVAMNPVEHP Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHP 210 The following BLAST results are available for this feature:
BLAST of FC931333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931333 ID=FC931333; Name=FC931333; organism=Citrus clementina; type=EST; length=751bpback to top |