FC931336
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931336 vs. ExPASy Swiss-Prot
Match: GRXC4_ARATH (Glutaredoxin-C4 OS=Arabidopsis thaliana GN=GRXC4 PE=2 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.230e-42 Identity = 83/125 (66.40%), Postives = 108/125 (86.40%), Query Frame = 2 Query: 161 ISVLTLTIATLLFWASFSGASDKSAEAAFVEKTVSSHKIVIFSKAYCPYCRMAKSVFKELNMGPHVVELDERDDGWNIQDALGEMVGRRTVPRVFMNGKHIGGSDDTVEAYESGKLAQLLGIAAS 535 IS++ L +A + F + S A+ S EA FV+KT+SSHKIVIFSK+YCPYC+ AKSVF+EL+ P+VVELDER+DGW+IQ ALGE+VGRRTVP+VF+NGKH+GGSDDTV+AYESG+LA+LLG++ + Sbjct: 7 ISMVMLLVALVTFISMVSSAAS-SPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLLGVSGN 130
BLAST of FC931336 vs. ExPASy Swiss-Prot
Match: GRXC8_ORYSJ (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica GN=GRXC8 PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 2.033e-37 Identity = 73/107 (68.22%), Postives = 93/107 (86.92%), Query Frame = 2 Query: 212 SGASDKSAEAAFVEKTVSSHKIVIFSKAYCPYCRMAKSVFKELNMG--PHVVELDERDDGWNIQDALGEMVGRRTVPRVFMNGKHIGGSDDTVEAYESGKLAQLLGI 526 S AS +++++FV+ TV +H +VIFSK+YCPYCR AK+VFKEL + P+VVELD+R+DGW IQDAL +MVGRRTVP+VF++GKH+GGSDDTVEAYESGKLA+LL I Sbjct: 24 SAASGTASKSSFVKSTVKAHDVVIFSKSYCPYCRRAKAVFKELELKKEPYVVELDQREDGWEIQDALSDMVGRRTVPQVFVHGKHLGGSDDTVEAYESGKLAKLLNI 130
BLAST of FC931336 vs. ExPASy Swiss-Prot
Match: GRXC3_ARATH (Glutaredoxin-C3 OS=Arabidopsis thaliana GN=GRXC3 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.464e-27 Identity = 63/119 (52.94%), Postives = 81/119 (68.07%), Query Frame = 2 Query: 176 LTIATLLFWASFSGASDKSAEA----AFVEKTVSSHKIVIFSKAYCPYCRMAKSVFKELNMGPHVVELDERDDGWNIQDALGEMVGRRTVPRVFMNGKHIGGSDDTVEAYESGKLAQLL 520 + +A LL + S+ + A AFV+ + S+KIVIFSK+YCPYC +K +F +L P VVELD+R+DG IQ L E VGRRTVP+VF+NGKHIGGSDD A ESG+L +LL Sbjct: 9 VVVAALLLFVVLCDLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKLL 127
BLAST of FC931336 vs. ExPASy Swiss-Prot
Match: GRXS6_ORYSJ (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica GN=GRXS6 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.108e-26 Identity = 56/124 (45.16%), Postives = 84/124 (67.74%), Query Frame = 2 Query: 164 SVLTLTIATLLFWASFSGASDKSAEAAFVEKTVSSHKIVIFSKAYCPYCRMAKSVFKELNMGPHVVELDERDDGWNIQDALGEMVGRRTVPRVFMNGKHIGGSDDTVEAYESGKLAQLLGIAAS 535 + + + + LL A A+ + +AFV+ + S++I IFSK YCPY AK +F++L P++VELD R+DG IQ L ++VGR TVP+VF+NG+H+GGSDDT A+ +G+L +LLG + S Sbjct: 6 AAVPIAVFLLLVLAEADPAAATRSPSAFVQNAIYSNRITIFSKTYCPYSMRAKRIFRDLKENPYIVELDLREDGREIQSVLLDLVGRHTVPQVFVNGQHVGGSDDTANAHSNGQLQKLLGNSQS 129
BLAST of FC931336 vs. ExPASy Swiss-Prot
Match: GRXC6_ORYSJ (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN=GRXC6 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.464e-19 Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 242 AFVEKTVSSHKIVIFSKAYCPYCRMAKSVFKELNMGPHVVELDERDDGWNIQDALGEMVGRRTVPRVFMNGKHIGGSDDTVEAYESGKLAQLL 520 A ++TV+S +V++SK+YCP+C K +F++L +ELD DG +Q AL E G+RTVP VF+NGKHIGG DDT+ GKL LL Sbjct: 4 AKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRTVPNVFINGKHIGGCDDTLALNNEGKLVPLL 96
BLAST of FC931336 vs. ExPASy Swiss-Prot
Match: GLRX_VERFO (Glutaredoxin OS=Vernicia fordii PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.258e-19 Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 2 Query: 251 EKTVSSHKIVIFSKAYCPYCRMAKSVFKELNMGPHVVELDERDDGWNIQDALGEMVGRRTVPRVFMNGKHIGGSDDTVEAYESGKLAQLL 520 ++ VSS+ +V+FSK +CPYC K + +L V+ELD DG ++Q+AL E G+RTVP VF+ GKHIGG D T ++ GKL LL Sbjct: 7 QELVSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDSESDGSDLQNALAEWTGQRTVPNVFIGGKHIGGCDKTTGMHQEGKLIPLL 96
BLAST of FC931336 vs. ExPASy Swiss-Prot
Match: GLRX_DICDI (Glutaredoxin OS=Dictyostelium discoideum GN=grxA PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.561e-19 Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 248 VEKTVSSHKIVIFSKAYCPYCRMAKSVFKELNMGPHVVELDERDDGWNIQDALGEMVGRRTVPRVFMNGKHIGGSDDTVEAYESGKLAQLL 520 V+ + +HK++IFSK CPYC K +FK+L + P VVELD DG +Q A G++ G RTVP+VF+N K IGG D T + + GKL LL Sbjct: 4 VKALIKAHKLIIFSKTTCPYCISVKDLFKKLKVVPFVVELDLESDGSELQSAAGQISGVRTVPQVFINEKFIGGCDATTKLHSQGKLIPLL 94
BLAST of FC931336 vs. ExPASy Swiss-Prot
Match: GLRX_RICCO (Glutaredoxin OS=Ricinus communis PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.263e-19 Identity = 45/90 (50.00%), Postives = 56/90 (62.22%), Query Frame = 2 Query: 251 EKTVSSHKIVIFSKAYCPYCRMAKSVFKELNMGPHVVELDERDDGWNIQDALGEMVGRRTVPRVFMNGKHIGGSDDTVEAYESGKLAQLL 520 ++ VSS+ +V+FSK YCPYC K + +L VVELD DG IQ AL E G+RTVP VF+ GKHIGG D T + G+L LL Sbjct: 7 KELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAEWTGQRTVPNVFIGGKHIGGCDSTTAKHSQGQLVPLL 96
BLAST of FC931336 vs. ExPASy Swiss-Prot
Match: GLRX2_BOVIN (Glutaredoxin-2, mitochondrial OS=Bos taurus GN=GLRX2 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.263e-19 Identity = 44/91 (48.35%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 248 VEKTVSSHKIVIFSKAYCPYCRMAKSVFKELNMGPHVVELDERDDGWNIQDALGEMVGRRTVPRVFMNGKHIGGSDDTVEAYESGKLAQLL 520 +++T+S++ +VIFSK C YC MAK++F ++N+ VVELD + G QDAL +M G RTVPR+F+NG IGG+ DT ++ GKL L+ Sbjct: 54 IQETISNNCVVIFSKTSCSYCTMAKNLFHDMNVNYKVVELDMLEYGSQFQDALHKMTGERTVPRIFVNGTFIGGATDTHRLHKEGKLLPLV 144
BLAST of FC931336 vs. ExPASy Swiss-Prot
Match: GLRX2_MOUSE (Glutaredoxin-2, mitochondrial OS=Mus musculus GN=Glrx2 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.239e-18 Identity = 43/91 (47.25%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 248 VEKTVSSHKIVIFSKAYCPYCRMAKSVFKELNMGPHVVELDERDDGWNIQDALGEMVGRRTVPRVFMNGKHIGGSDDTVEAYESGKLAQLL 520 +++T+S++ +VIFSK C YC MAK +F ++N+ VELD + G QDAL +M G RTVPR+F+NG+ IGG+ DT ++ GKL L+ Sbjct: 53 IQETISNNCVVIFSKTSCSYCSMAKKIFHDMNVNYKAVELDMLEYGNQFQDALHKMTGERTVPRIFVNGRFIGGAADTHRLHKEGKLLPLV 143 The following BLAST results are available for this feature:
BLAST of FC931336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931336 ID=FC931336; Name=FC931336; organism=Citrus clementina; type=EST; length=646bpback to top |