FC931379

Overview
NameFC931379
Unique NameFC931379
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_ARATH (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Arabidopsis thaliana GN=ISPD PE=1 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.232e-68
Identity = 128/159 (80.50%), Postives = 144/159 (90.57%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI 681
            ILLAGG+GKRM  +MPKQY+PLLGQPIALYSF+TFSRM EVKEIVVVCDP + DIFEE +E I+VDL+F++PGKERQDSVYSGLQE+D NSELVCIHDSARPLV ++DV+KVL D   VGAAVLGVPAKATIKE NS+S VV+TLDRKTLWEMQTPQVI
Sbjct:   82 ILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESIDVDLRFAIPGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQTPQVI 240          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PARUW (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Protochlamydia amoebophila (strain UWE25) GN=ispD PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.136e-34
Identity = 75/159 (47.17%), Postives = 108/159 (67.92%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI 681
            +LLAGG G RM   +PKQYL +  +PIAL+SF   + M E+++++VVC+P Y  +F  T  K+N  L F+ PG  RQDS+++G++ +  N  LVCIHDSARP +    +++ + +A + GAAVLGV  KATIK    + F+V T +R  LWEMQTPQ++
Sbjct:   11 VLLAGGMGTRMKNLIPKQYLTIQEKPIALHSFEKLASMPEIEQMIVVCEPQYEQLF--TVYKLNKPLIFARPGLRRQDSLWNGIKLIAGNP-LVCIHDSARPFIEIDRIRQTVAEAEKWGAAVLGVRVKATIKICEEKQFIVNTPNRAFLWEMQTPQIV 166          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CHLPN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydia pneumoniae GN=ispD PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.415e-30
Identity = 71/159 (44.65%), Postives = 99/159 (62.26%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI 681
            ILL+GG+G R G+ +PKQYLPL G P+ L+S    S + ++ E++VVCDPSY + F+E        + F++PG+ RQDSV+SGLQ+V +    V IHD ARP +   ++  +L  A ++GA  L  P   TIK+ N     VRTLDR  L  + TPQ I
Sbjct:    7 ILLSGGQGTRFGSKIPKQYLPLNGTPLVLHSLKILSSLPQIAEVIVVCDPSYQETFQE------YPVSFAIPGERRQDSVFSGLQQVSY--PWVIIHDGARPFIYPDEIHDLLETAEKIGATALASPIPYTIKQRNP----VRTLDRDNLAIIHTPQCI 153          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CHLAB (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydophila abortus GN=ispD PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.912e-27
Identity = 70/159 (44.03%), Postives = 96/159 (60.38%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI 681
            ILL+GGKG+R GAN PKQYLP  G+P+ L++     R+ E+ EI+VVCD +Y  IFE         +KF+ PG  RQDSV+SGLQ+V   +  V +HD  RP +   +V +++  A + GAA L      TIK+ +     V+TLDR  L  + TPQ I
Sbjct:   13 ILLSGGKGERFGANQPKQYLPFRGEPLILHALNMALRIPEISEIIVVCDVNYESIFE------GYPVKFARPGTRRQDSVFSGLQQV--ANPWVLVHDGVRPFIYPDEVTELVTAAYQTGAATLVSNVPYTIKQRDP----VKTLDRDALSIVHTPQCI 159          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CHLMU (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydia muridarum GN=ispD PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.261e-27
Identity = 66/159 (41.51%), Postives = 94/159 (59.12%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI 681
            +LL GG+G+R  +  PKQY PL G+P+ L++ +++  +  ++EIVVVC+  Y ++F          +KF+ PG  RQDSV+SGLQ+V      VC+HD  RP V + +V +V   AL+ GAA L   A  TIK        VRTLDR  +  + TPQ I
Sbjct:    8 VLLGGGRGERFNSPQPKQYTPLCGEPLILHALHSYQSLPFIQEIVVVCEEHYQELFSP------YSVKFASPGALRQDSVFSGLQQVSL--PWVCVHDGVRPFVYANEVSEVCSAALKTGAAALATSATYTIKSRTP----VRTLDRDAVAVIHTPQCI 154          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CHLCV (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydophila caviae GN=ispD PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 4.259e-27
Identity = 70/159 (44.03%), Postives = 96/159 (60.38%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI 681
            ILL+GGKG+R GAN PKQYLP  G+P+ L++  T   + E+ E++VVCD SY  IFE         +KF+  GK RQDSV+SGLQ V  ++  V IHD  RP +   +V +++  A + GAA L      TIK+ +     V+TLDR  L  + TPQ +
Sbjct:    8 ILLSGGKGERFGANQPKQYLPFQGEPLILHALKTALHIPEITEVIVVCDVSYRHIFE------GFPVKFAESGKRRQDSVFSGLQHV--SNPWVLIHDGVRPFIYPDEVTELIAVAQQTGAATLVSNVPYTIKQRHP----VKTLDRDALSIVHTPQCV 154          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CHLTR (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydia trachomatis GN=ispD PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.563e-27
Identity = 68/159 (42.77%), Postives = 96/159 (60.38%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI 681
            +LL GGKG+R  +  PKQY  L G+P+ L++ + + R+  V+E+VVVC+  Y ++F      +   +KF+ PG  RQDSV+SGLQ+V  ++  VCIHD  RP V + +V +V   A + GAA L  PA  TIK        VRTLDR  L  + TPQ +
Sbjct:    8 VLLGGGKGERFNSLQPKQYTHLCGEPLILHALHAYQRLPFVQEVVVVCEEQYRELF------LPYSVKFASPGTLRQDSVFSGLQQV--STPWVCIHDGVRPFVYADEVIEVCSAARKTGAAALASPATYTIKSCAP----VRTLDRDALAVIHTPQCL 154          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CHLTA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=ispD PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.563e-27
Identity = 68/159 (42.77%), Postives = 96/159 (60.38%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI 681
            +LL GGKG+R  +  PKQY  L G+P+ L++ + + R+  V+E+VVVC+  Y ++F      +   +KF+ PG  RQDSV+SGLQ+V  ++  VCIHD  RP V + +V +V   A + GAA L  PA  TIK        VRTLDR  L  + TPQ +
Sbjct:    8 VLLGGGKGERFNSLQPKQYTHLCGEPLILHALHAYQRLPFVQEVVVVCEEQYRELF------LPYSVKFASPGTLRQDSVFSGLQQV--STPWVCIHDGVRPFVYADEVIEVCSAARKTGAAALASPATYTIKSCAP----VRTLDRDALAVIHTPQCL 154          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CHLFF (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Chlamydophila felis (strain Fe/C-56) GN=ispD PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.563e-27
Identity = 70/159 (44.03%), Postives = 95/159 (59.75%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVI 681
            ILL+GGKG+R GAN PKQYLP  GQP+ L++  +   + E+ EI+VVCD SY  IFE         +KF+  G  RQDSV+SGL  V   +  V +HD  RP +   +V ++++ A + GAA L      TIK+ N     V+TLDR +L  + TPQ I
Sbjct:    8 ILLSGGKGERFGANQPKQYLPFQGQPLILHALNSALLIPEINEIIVVCDASYEHIFE------GYSVKFAPAGMRRQDSVFSGLHHV--TNPWVLVHDGVRPFIYPDEVSELIVIAQQTGAATLVSNVPYTIKQRNP----VKTLDRDSLSIVHTPQCI 154          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_THETN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Thermoanaerobacter tengcongensis GN=ispD PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.488e-27
Identity = 65/161 (40.37%), Postives = 97/161 (60.25%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK-EKI--NVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678
            +++A G+  RM  ++ K YL + G+P+  YS   F  +  +KEI+VV  P  ++  +E   EK   N   K    G+ERQ SVY+G+  VD + E+V IHD ARPLV  + + + +  A    AA +GVP K TIK A+ ++F++ T DR+ LW +QTPQV
Sbjct:    6 VIVAAGRSTRMNKSLNKVYLSIAGKPVLYYSIKAFDEIEWIKEIIVVTSPEETEYCQENVLEKFYWNKPFKIVKGGEERQYSVYNGISVVDKDCEIVAIHDGARPLVTKEIIMEAIKAAYLYKAAAVGVPVKDTIKVADEDNFILDTPDRRYLWAIQTPQV 166          
The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
ISPD_ARATH2.232e-6880.502-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_PARUW6.136e-3447.172-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CHLPN1.415e-3044.652-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CHLAB1.912e-2744.032-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CHLMU3.261e-2741.512-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CHLCV4.259e-2744.032-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CHLTR5.563e-2742.772-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CHLTA5.563e-2742.772-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CHLFF5.563e-2744.032-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_THETN9.488e-2740.372-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]

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Properties
Property NameValue
Genbank descriptionC34104E04EF PostHarvP1 Citrus clementina cDNA clone C34104E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bp
CTGCTTCAGCTGAACCTTGCTCTGTCTTCTTCAACTTCTTCTCTCTCACT
GTTCCCAGACAACCACCAAACTTTCTCCAGAACTGGTCATAAAAATCAGT
TCTTTGGCTTGACAAGGAAGGCCAGGCTTGCAACATCCAGGATTAGATGT
TCTGCTAAAGTTGATAATGGTTCTGTCGTTGTTAAAGATAAGAGTGTATC
AGTTATTCTTTTGGCTGGAGGGAAGGGCAAAAGAATGGGTGCGAACATGC
CAAAGCAGTATCTACCACTTTTGGGTCAACCCATTGCATTGTATAGTTTC
TACACTTTCTCACGCATGGTTGAAGTGAAGGAAATTGTGGTAGTTTGTGA
TCCATCTTACAGTGACATCTTTGAAGAAACCAAAGAGAAGATCAATGTAG
ACCTTAAATTCTCACTTCCGGGGAAGGAGAGGCAAGATTCTGTTTACAGC
GGACTTCAGGAAGTTGATTTTAACTCTGAGCTCGTGTGCATCCATGATTC
TGCTAGACCTTTGGTATTATCTAAAGATGTGCAAAAGGTCCTTATGGATG
CTTTGCGGGTCGGAGCAGCTGTACTTGGTGTTCCTGCCAAAGCTACAATT
AAAGAGGCAAATAGCGAATCTTTTGTGGTTAGAACCCTGGACCGCAAAAC
TCTTTGGGAAATGCAGACCCCTCAGGTGATCAAGCCTGGCTTGCTTAAAA
AGGGTTTGAGCTTGTCATAGGGAAGGTCTTGAAGTACTGATGATGTATCT
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