FC931400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931400 vs. ExPASy Swiss-Prot
Match: PLYD_ASPNG (Pectin lyase D OS=Aspergillus niger GN=pelD PE=1 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 1.029e-78 Identity = 143/206 (69.42%), Postives = 160/206 (77.67%), Query Frame = 2 Query: 95 MKYALVLTAIVTIASXXXXXXXXXXPEXXXXXXXXXXXXXPVYPTTNEELVSYLGDSEARVIVLSKTFDFTDSEGSTTTGGCLPFGTAPNCQVAINKDNWCHNYEPNAATTTVTYKNAGMLGINIGSNKSLIGEGTSGVIKGRGLRLANGVQNIIVQNIAVTDINARYVWGGDAITLDQADLVWLDHITTARIGRQHYVLGTGADN 712 MKYA LTAI +A+ P PVYPTT +ELVSYLGD EARVIVLSKTFDFTD+EG+TTT GC P+GTA CQ+AINKD+WC NYEP+A TTTVTY AG LGI + SNKSLIGEGTSGVIKGRGLR+ +GV NII+QNIAVTDIN YVWGGDAITLD+ADLVW+DH+TTARIGRQHYVLGT AD+ Sbjct: 1 MKYAAALTAIAALAARAAAVGVSGTPVGFASSATGGGDATPVYPTTTDELVSYLGDDEARVIVLSKTFDFTDTEGTTTTTGCAPWGTASGCQLAINKDDWCTNYEPDAPTTTVTYNTAGELGITVNSNKSLIGEGTSGVIKGRGLRMVSGVSNIIIQNIAVTDINPEYVWGGDAITLDEADLVWIDHVTTARIGRQHYVLGTDADS 206
BLAST of FC931400 vs. ExPASy Swiss-Prot
Match: PLYA_ASPNG (Pectin lyase A OS=Aspergillus niger GN=pelA PE=1 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.297e-70 Identity = 126/171 (73.68%), Postives = 148/171 (86.55%), Query Frame = 2 Query: 215 PVYPTTNEELVSYLGDSEARVIVLSKTFDFTDSEGSTTTGGCLPFGTAPNCQVAINKDNWCHNYEPNAATTTVTYKNAGMLGINIGSNKSLIGEGTSGVIKGRGLRLANGVQNIIVQNIAVTDINARYVWGGDAITLDQADLVWLDHITTARIGRQHYVLGTGADN-VSLS 724 PVYP T +ELVSYLGD EARVIVL+KTFDFTDSEG+TT GC P+GTA CQVAI++D+WC NYEP+A + +V Y NAG+LGI + SNKSLIGEG+SG IKG+GLR+ +G +NII+QNIAVTDIN +YVWGGDAITLD DLVW+DH+TTARIGRQHYVLGT ADN VSL+ Sbjct: 42 PVYPDTIDELVSYLGDDEARVIVLTKTFDFTDSEGTTTGTGCAPWGTASACQVAIDQDDWCENYEPDAPSVSVEYYNAGVLGITVTSNKSLIGEGSSGAIKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLT 212
BLAST of FC931400 vs. ExPASy Swiss-Prot
Match: PLYB_ASPNG (Pectin lyase B OS=Aspergillus niger GN=pelB PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.640e-63 Identity = 111/166 (66.87%), Postives = 138/166 (83.13%), Query Frame = 2 Query: 215 PVYPTTNEELVSYLGDSEARVIVLSKTFDFTDSEGSTTTGGCLPFGTAPNCQVAINKDNWCHNYEPNAATTTVTYKNAGMLGINIGSNKSLIGEGTSGVIKGRGLRLANGVQNIIVQNIAVTDINARYVWGGDAITLDQADLVWLDHITTARIGRQHYVLGTGADN 712 PVYPTT +ELVSYLGD+E RVI+L +TFDFT +EG+ TT GC P+GTA CQVAIN +WC NY+ +A +VT K AG+L I + SNKS++G+GT GVIKG+GLR+ +G +N+I+QNIAVTDIN +YVWGGDAIT+D +DLVW+DH+TTARIGRQH VLGT ADN Sbjct: 42 PVYPTTTDELVSYLGDNEPRVIILDRTFDFTGTEGTETTTGCAPWGTASQCQVAINLHSWCDNYQASAPKVSVTDK-AGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADN 206
BLAST of FC931400 vs. ExPASy Swiss-Prot
Match: PLYA_COLGL (Pectin lyase OS=Colletotrichum gloeosporioides GN=PNLA PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.676e-60 Identity = 106/166 (63.86%), Postives = 130/166 (78.31%), Query Frame = 2 Query: 215 PVYPTTNEELVSYLGDSEARVIVLSKTFDFTDSEGSTTTGGCLPFGTAPNCQVAINKDNWCHNYEPNAATTTVTYKNAGMLGINIGSNKSLIGEGTSGVIKGRGLRLANGVQNIIVQNIAVTDINARYVWGGDAITLDQADLVWLDHITTARIGRQHYVLGTGADN 712 PVYP+T EL SYL DS ARVIVL+KTFDFT +EG+TT GC P+GTA CQVAINKDNWC NY+PNA +V+Y A + +GSNKSLIG+G+ GVIKG+GLR+ N +N+I+QNI +T++N +YVWGGDAI+LD DLVW DH+ T+ IGRQH VLG GA N Sbjct: 43 PVYPSTTAELASYLKDSSARVIVLTKTFDFTGTEGTTTETGCAPYGTAAACQVAINKDNWCTNYQPNAPKVSVSYDKAPFNPLIVGSNKSLIGQGSKGVIKGKGLRITNSAKNVIIQNIHITNLNPKYVWGGDAISLDGTDLVWFDHVKTSLIGRQHIVLGNGASN 208 The following BLAST results are available for this feature:
BLAST of FC931400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931400 ID=FC931400; Name=FC931400; organism=Citrus clementina; type=EST; length=736bpback to top |