FC931455
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931455 vs. ExPASy Swiss-Prot
Match: P4HA1_CAEEL (Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans GN=dpy-18 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15 Identity = 47/135 (34.81%), Postives = 75/135 (55.56%), Query Frame = 1 Query: 322 FDPSRVTQLSWNPRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFR---DKMKSQLG-GHRIATVXMYL 714 + P +V +NP A ++K +SD+E + +LAK KL ++ V D+ +GK + + R S +L + + ++V ++ RI T L E E +QI +Y G Y+PHFD + K LG G+RIATV Y+ Sbjct: 316 YAPIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFESLGTGNRIATVLFYM 450
BLAST of FC931455 vs. ExPASy Swiss-Prot
Match: P4HA1_RAT (Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.399e-14 Identity = 45/123 (36.59%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 358 PRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFR----DKMKSQLGGHRIATVXMYL 714 PR + +SD E + + DLAK +L ++ V D E+GK ++ R S +LS +D +V+ I RI T L E +Q+ +Y G +YEPHFDF R D + G+RIAT Y+ Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYM 457
BLAST of FC931455 vs. ExPASy Swiss-Prot
Match: P4HA1_CHICK (Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13 Identity = 45/123 (36.59%), Postives = 65/123 (52.85%), Query Frame = 1 Query: 358 PRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFR----DKMKSQLGGHRIATVXMYL 714 PR + +SDEE + + +LAK +L ++ V D E+GK + R S +LS + +V+ I RI T L E +Q+ +Y G +YEPHFDF R D K G+RIAT Y+ Sbjct: 317 PRIVRFLDIISDEEIETVKELAKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYESPVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYM 439
BLAST of FC931455 vs. ExPASy Swiss-Prot
Match: P4HA2_CHICK (Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13 Identity = 42/122 (34.43%), Postives = 64/122 (52.46%), Query Frame = 1 Query: 355 NPRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFRDKMKSQL--GGHRIATVXMYL 714 +P Y +SDEE + + LAK KL ++ V D ++G + R S +L + D +VA + R+ T L + E +Q+ +Y G +YEPHFDF R S L G+R+AT Y+ Sbjct: 336 SPHIVRYYDVMSDEEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTLKSEGNRLATFLNYM 457
BLAST of FC931455 vs. ExPASy Swiss-Prot
Match: P4HA3_RAT (Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12 Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 328 PSRVTQLSWNPRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFL--PPENGEAMQILHYEHGQKYEPHFDFFRD------KMKSQLGGHRIATVXMYL 714 P+R + P +Y F+SDEE + +LA+ L++S+VA E K + E R S +L D ++ +++ RIAA T L P E +Q+++Y G YEPHFD KMKS G+R AT+ +YL Sbjct: 336 PARKEVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQRSVVASGE--KQLQVEYRISKSAWLKDTVDPVLVTLDRRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYKMKS---GNRAATLMIYL 467
BLAST of FC931455 vs. ExPASy Swiss-Prot
Match: P4HA2_MOUSE (Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12 Identity = 41/124 (33.06%), Postives = 65/124 (52.42%), Query Frame = 1 Query: 355 NPRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFR----DKMKSQLGGHRIATVXMYL 714 +P Y +SDEE + + ++AK KL ++ V D ++G + R S +L + D +VA + R+ T L + E +Q+ +Y G +YEPHFDF R D K G+R+AT Y+ Sbjct: 337 SPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFLNYM 460
BLAST of FC931455 vs. ExPASy Swiss-Prot
Match: P4HA2_HUMAN (Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12 Identity = 41/124 (33.06%), Postives = 65/124 (52.42%), Query Frame = 1 Query: 355 NPRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFF----RDKMKSQLGGHRIATVXMYL 714 +P Y +SDEE + + ++AK KL ++ V D ++G + R S +L + D +VA + R+ T L + E +Q+ +Y G +YEPHFDF RD K G+R+AT Y+ Sbjct: 335 SPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFLNYM 458
BLAST of FC931455 vs. ExPASy Swiss-Prot
Match: P4HA2_CAEEL (Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans GN=phy-2 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12 Identity = 41/133 (30.83%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 328 PSRVTQLSWNPRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFRDKMKSQL----GGHRIATVXMYL 714 P +V L ++P A ++K + D E + + +LA KL+++ V ++++G+ + R S +L D ++ + RI +T L E +Q+ +Y G Y+PHFDF R + K+ G+RIATV Y+ Sbjct: 315 PIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYM 447
BLAST of FC931455 vs. ExPASy Swiss-Prot
Match: P4HA3_MOUSE (Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12 Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 328 PSRVTQLSWNPRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFL--PPENGEAMQILHYEHGQKYEPHFDFFRD------KMKSQLGGHRIATVXMYL 714 P+R + P +Y F+SDEE + +LA+ L++S+VA E K + E R S +L D ++ +++ RIAA T L P E +Q+++Y G YEPHFD +MKS G+R+AT +YL Sbjct: 334 PARKEVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSVVASGE--KQLQVEYRISKSAWLKDTVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKS---GNRVATFMIYL 465
BLAST of FC931455 vs. ExPASy Swiss-Prot
Match: P4HA1_MOUSE (Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11 Identity = 41/123 (33.33%), Postives = 63/123 (51.22%), Query Frame = 1 Query: 358 PRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFR----DKMKSQLGGHRIATVXMYL 714 PR + +SD E + + DLAK +L ++ +++ +G R S +LS +D +V+ I RI T L E +Q+ +Y G +YEPHFDF R D + G+RIAT Y+ Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYM 457 The following BLAST results are available for this feature:
BLAST of FC931455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931455 ID=FC931455; Name=FC931455; organism=Citrus clementina; type=EST; length=716bpback to top |