FC931468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: PSD7_ARATH (Probable 26S proteasome non-ATPase regulatory subunit 7 OS=Arabidopsis thaliana GN=RPN8 PE=2 SV=1) HSP 1 Score: 396.741 bits (1018), Expect = 6.254e-110 Identity = 197/221 (89.14%), Postives = 207/221 (93.67%), Query Frame = 2 Query: 53 MDVIKTQQISSRPIEKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTAXKGLDARLREIRGYLD 715 MDVIKTQQIS+R IEKV+VHPLVLLSIVD+YNRVAKD+ KRVVGVLLGSS +G VDV+NSYAVPFEEDDKDP IWFLDHNYHESM+ MFKRINAKEHVVGWYSTGPKLRENDLD+H LF+ YVPNPVLVIIDVQPKELGIPTKAYY VEEVKENATQKSQKVFVHV +EIAAHEVEEIGVEHLLRDVKDTTISTLA EVT KLTA KGLDARLREIR YLD Sbjct: 1 MDVIKTQQISARTIEKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRGVVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTAKLTALKGLDARLREIRSYLD 221
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: PSD7_BOVIN (26S proteasome non-ATPase regulatory subunit 7 OS=Bos taurus GN=PSMD7 PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 2.569e-71 Identity = 127/209 (60.77%), Postives = 167/209 (79.90%), Query Frame = 2 Query: 92 IEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTAXKGLDARLREIRGYLD 715 ++KV+VHPLVLLS+VD++NR+ K +KRVVGVLLGS K +DVSNS+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ T S K F HV SEI A E EE+GVEHLLRD+KDTT+ TL+ +T ++ KGL+++L +IRGYL+ Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRGYLE 213
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: PSD7_DICDI (26S proteasome non-ATPase regulatory subunit 7 OS=Dictyostelium discoideum GN=psmD7 PE=3 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 7.474e-71 Identity = 127/203 (62.56%), Postives = 163/203 (80.30%), Query Frame = 2 Query: 104 IVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTAXKGLDARLREIRGYL 712 IVHP VLLS+VD+YNRVAKDT KRVVG LLGS+ KG VDVSN Y +PFEED+ +P IWFLDHN+HE+M++MFK+INA+E+VVGWYSTGPK+R D DI++LF Y PNPV+VIIDV PKELGIPTK+Y VEE+ ++ ++ + + F H+PS I A E EEI +EHLLRDVKD++IS+L ++T K + K L L+E++ YL Sbjct: 9 IVHPTVLLSVVDHYNRVAKDTNKRVVGALLGSNNKGVVDVSNCYGLPFEEDEANPNIWFLDHNFHENMFAMFKKINARENVVGWYSTGPKIRPADQDINELFRRYTPNPVMVIIDVAPKELGIPTKSYVTVEEINKDTSESTMR-FQHIPSSIDAVEAEEICIEHLLRDVKDSSISSLTTQITDKKISLKHLLTNLQEMQHYL 210
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: PSD7_MOUSE (26S proteasome non-ATPase regulatory subunit 7 OS=Mus musculus GN=Psmd7 PE=1 SV=2) HSP 1 Score: 266.159 bits (679), Expect = 1.275e-70 Identity = 126/209 (60.29%), Postives = 166/209 (79.43%), Query Frame = 2 Query: 92 IEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTAXKGLDARLREIRGYLD 715 ++KV+VHPLVLLS+VD++NR+ K +KRVVGVLLGS K +DVSNS+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ T S K F HV SEI A E EE+GVEHLLRD+KDTT+ TL+ +T ++ KGL+++L +IR YL+ Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLE 213
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: PSD7_HUMAN (26S proteasome non-ATPase regulatory subunit 7 OS=Homo sapiens GN=PSMD7 PE=1 SV=2) HSP 1 Score: 266.159 bits (679), Expect = 1.275e-70 Identity = 126/209 (60.29%), Postives = 166/209 (79.43%), Query Frame = 2 Query: 92 IEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTAXKGLDARLREIRGYLD 715 ++KV+VHPLVLLS+VD++NR+ K +KRVVGVLLGS K +DVSNS+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ T S K F HV SEI A E EE+GVEHLLRD+KDTT+ TL+ +T ++ KGL+++L +IR YL+ Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLE 213
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: PSD7_DROME (26S proteasome non-ATPase regulatory subunit 7 OS=Drosophila melanogaster GN=Mov34 PE=1 SV=6) HSP 1 Score: 265.003 bits (676), Expect = 2.840e-70 Identity = 130/217 (59.91%), Postives = 171/217 (78.80%), Query Frame = 2 Query: 68 TQQISSRPIEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGS-SFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTAXKGLDARLREIRGYL 712 +Q++S + KVIVHPLVLLS+VD++NR+ K +KRVVGVLLG KG +DVSNS+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E VVGWY TGPKL +ND+ I++L Y PN VLVIID +PK+LG+PT+AY VEEV ++ + S K F HVPSEI A E EE+GVEHLLRD+KDTT+ +L+ ++T +L KGL+A+LR+I+ YL Sbjct: 3 SQEVS---VNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPTEAYISVEEVHDDGSPTS-KTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQKITNQLMGLKGLNAQLRDIKQYL 215
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: RPN8_NEUCR (26S proteasome regulatory subunit rpn-8 OS=Neurospora crassa GN=rpn-8 PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.723e-67 Identity = 124/206 (60.19%), Postives = 157/206 (76.21%), Query Frame = 2 Query: 101 VIVHPLVLLSIVDNYNRVA--KDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTAXKGLDARLREIRGYL 712 V V PLVLLS+VD+YNR K KRVVGVLLG + V VSNS+AVPFEEDDKDP +WFLDHNY ESM MFK++NA+E ++GWY +GPKLR +DLDI++LF Y PNP+LVI+DVQPKE G+PT AY+ V+E+K++ T S K FVH PS I A E EEIGVEHLLRD++D + TL+ +T ++ + +GL RLR+I+ YL Sbjct: 16 VSVAPLVLLSVVDHYNRTQANKSKSKRVVGVLLGQNDGKNVRVSNSFAVPFEEDDKDPSVWFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRASDLDINELFKRYTPNPLLVIVDVQPKETGVPTDAYFAVDEIKDDGTTTS-KTFVHTPSIIEAEEAEEIGVEHLLRDIRDVAVGTLSTRITNQMRSLQGLHHRLRDIQAYL 220
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: RPN8_SCHPO (26S proteasome regulatory subunit rpn8 OS=Schizosaccharomyces pombe GN=rpn8 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 2.939e-67 Identity = 120/206 (58.25%), Postives = 160/206 (77.67%), Query Frame = 2 Query: 95 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTAXKGLDARLREIRGYL 712 ++VIVHPLVLLS VD+YNR AK T++RVVG+LLG + V+V+NSYA+PFEED+K+ +WFLDHN+ ESM MFK+INA E +VGWY TGP+LR +DL+I+ L Y+PNPVLVIIDV+PK +G+PT AY+ ++E++++ + KS + FVH+PS I A E EEIGVEHLLRD +D ++ TLA VT + + +GL RL EI YL Sbjct: 15 QQVIVHPLVLLSAVDSYNRSAKGTKRRVVGILLGQNNGDVVNVANSYAIPFEEDEKNASVWFLDHNFMESMNEMFKKINANEKLVGWYHTGPQLRPSDLEINNLLKKYIPNPVLVIIDVKPKSVGLPTNAYFAIDEIEDDGS-KSSRTFVHLPSSIEAEEAEEIGVEHLLRDTRDASVGTLATRVTQQAQSLQGLGQRLTEIADYL 219
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: RPN8_ASHGO (26S proteasome regulatory subunit RPN8 OS=Ashbya gossypii GN=RPN8 PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.982e-56 Identity = 107/208 (51.44%), Postives = 151/208 (72.60%), Query Frame = 2 Query: 95 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVP-NPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTAXKGLDARLREIRGYLD 715 E+V V PLVLLS++D+Y R+ KR VGVLLG + T+ V+NS+A+PFEED+K+P +WFLDHNY E+M M K+INAKE ++GWY +GPKLR +DL I+ LF Y N +L+I+DV+ + +G+PT AY +EEVK++ + +++ FVH+P+ I A E EEIGVEHLLRDV+D L+ +T +L + +GL +LR+I YLD Sbjct: 6 EQVNVAPLVLLSVLDHYKRMNTPDNKRCVGVLLGDNSGSTIKVTNSFALPFEEDEKNPDVWFLDHNYIENMNDMCKKINAKEKMIGWYHSGPKLRSSDLKINGLFKKYTQGNSLLLIVDVKQQGVGLPTDAYMAIEEVKDDGS-STERTFVHLPTAIEAEEAEEIGVEHLLRDVRDQAAGNLSLRLTNQLKSLQGLQRKLRDIVAYLD 212
BLAST of FC931468 vs. ExPASy Swiss-Prot
Match: RPN8_YEAST (26S proteasome regulatory subunit RPN8 OS=Saccharomyces cerevisiae GN=RPN8 PE=1 SV=3) HSP 1 Score: 217.624 bits (553), Expect = 5.200e-56 Identity = 105/208 (50.48%), Postives = 150/208 (72.12%), Query Frame = 2 Query: 95 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVP-NPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTAXKGLDARLREIRGYLD 715 EKV + PLVLLS +D+Y R KR VGV+LG + T+ V+NS+A+PFEED+K+ +WFLDHNY E+M M K+INAKE ++GWY +GPKLR +DL I++LF Y NP+L+I+DV+ + +G+PT AY +E+VK++ T ++K F+H+P I A E EEIGVEHLLRDV+D L+ +T +L + KGL ++L+++ YLD Sbjct: 6 EKVTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSFALPFEEDEKNSDVWFLDHNYIENMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQNNPLLLIVDVKQQGVGLPTDAYVAIEQVKDDGT-STEKTFLHLPCTIEAEEAEEIGVEHLLRDVRDQAAGGLSIRLTNQLKSLKGLQSKLKDVVEYLD 212 The following BLAST results are available for this feature:
BLAST of FC931468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931468 ID=FC931468; Name=FC931468; organism=Citrus clementina; type=EST; length=717bpback to top |