FC931494
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2C_ARATH (Casein kinase II subunit beta' OS=Arabidopsis thaliana GN=CKB2 PE=1 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 1.378e-81 Identity = 144/187 (77.01%), Postives = 154/187 (82.35%), Query Frame = 1 Query: 1 GLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKATQSYVPRVFGFKLHKP 561 GLS QVPYYDYALDLILDVESSHG+MFTEEQNEL+ESAAEMLYG+IH R+ILTSKG+A+M L+KYKNYDFGRCPRVYCCGQPCLPVGQSDIPR+STVKIYCPKCED+YYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKA+QSY RVFGFKLHKP Sbjct: 125 GLSHQVPYYDYALDLILDVESSHGEMFTEEQNELIESAAEMLYGMIHARFILTSKGLASM-----------------------------LDKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRASTVKIYCPKCEDVYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKASQSYTQRVFGFKLHKP 282
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2B_ARATH (Casein kinase II subunit beta OS=Arabidopsis thaliana GN=CKB1 PE=1 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 4.009e-81 Identity = 146/187 (78.07%), Postives = 153/187 (81.82%), Query Frame = 1 Query: 1 GLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKATQSYVPRVFGFKLHKP 561 GLSS VPYY+YALDLILDVESS G+MFTEEQNEL+ESAAEMLYGLIH RYILTSKG+AAM L+KYKNYDFGRCPRVYCCGQPCLPVGQSD+PRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKP KATQ+YV RVFGFKLHKP Sbjct: 130 GLSSLVPYYEYALDLILDVESSQGEMFTEEQNELIESAAEMLYGLIHARYILTSKGLAAM-----------------------------LDKYKNYDFGRCPRVYCCGQPCLPVGQSDLPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPAKATQNYVQRVFGFKLHKP 287
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2E_ARATH (Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana GN=At2g44680 PE=2 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 7.076e-78 Identity = 139/185 (75.14%), Postives = 151/185 (81.62%), Query Frame = 1 Query: 1 GLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKATQSYVPRVFGFKLH 555 GLS QVPYYDYALDLILDVESS+GDMFTEEQ+E+VESAAEMLYGLIHVRYILT+KGMAAM +EKYKNYDFGRCPRV+CCGQ CLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLM YG++KPQK Q+YVP++FGFK+H Sbjct: 125 GLSGQVPYYDYALDLILDVESSNGDMFTEEQHEMVESAAEMLYGLIHVRYILTTKGMAAM-----------------------------MEKYKNYDFGRCPRVFCCGQSCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMAYGNMKPQKPAQNYVPKIFGFKVH 280
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2D_ARATH (Casein kinase II subunit beta-3 OS=Arabidopsis thaliana GN=CKB3 PE=1 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 5.071e-76 Identity = 137/187 (73.26%), Postives = 151/187 (80.75%), Query Frame = 1 Query: 1 GLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKATQSYVPRVFGFKLHKP 561 GLS QVPYYDYALDLILDV++S+ +MFT+EQ+E+VESAAEMLYGLIHVRYILT+KGMAAM EKYKN DFGRCPRV+CCGQ CLPVGQSDIPRSSTVKIYCPKCEDI YPRSK+QGNIDGAYFGTTFPHLFLMTYG+LKPQK TQSYVP++FGFK+HKP Sbjct: 119 GLSGQVPYYDYALDLILDVDASNSEMFTDEQHEMVESAAEMLYGLIHVRYILTTKGMAAMT-----------------------------EKYKNCDFGRCPRVFCCGQSCLPVGQSDIPRSSTVKIYCPKCEDISYPRSKFQGNIDGAYFGTTFPHLFLMTYGNLKPQKPTQSYVPKIFGFKVHKP 276
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2B_XENLA (Casein kinase II subunit beta OS=Xenopus laevis GN=csnk2b PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.945e-43 Identity = 86/185 (46.49%), Postives = 112/185 (60.54%), Query Frame = 1 Query: 1 GLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKATQSYVPRVFGFKLH 555 GL+ QVP+Y ALD+ILD+E Q++L+E AAEMLYGLIH RYILT++G+A M LEKY+ DFG CPRVYC QP LP+G SDIP + VK+YCPKC D+Y P+S + DGAYFGT FPH+ M + +P++ +VPR++GFK+H Sbjct: 38 GLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQM-----------------------------LEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIH 193
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2B_RAT (Casein kinase II subunit beta OS=Rattus norvegicus GN=Csnk2b PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.945e-43 Identity = 86/185 (46.49%), Postives = 112/185 (60.54%), Query Frame = 1 Query: 1 GLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKATQSYVPRVFGFKLH 555 GL+ QVP+Y ALD+ILD+E Q++L+E AAEMLYGLIH RYILT++G+A M LEKY+ DFG CPRVYC QP LP+G SDIP + VK+YCPKC D+Y P+S + DGAYFGT FPH+ M + +P++ +VPR++GFK+H Sbjct: 38 GLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQM-----------------------------LEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIH 193
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2B_RABIT (Casein kinase II subunit beta OS=Oryctolagus cuniculus GN=CSNK2B PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.945e-43 Identity = 86/185 (46.49%), Postives = 112/185 (60.54%), Query Frame = 1 Query: 1 GLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKATQSYVPRVFGFKLH 555 GL+ QVP+Y ALD+ILD+E Q++L+E AAEMLYGLIH RYILT++G+A M LEKY+ DFG CPRVYC QP LP+G SDIP + VK+YCPKC D+Y P+S + DGAYFGT FPH+ M + +P++ +VPR++GFK+H Sbjct: 38 GLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQM-----------------------------LEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIH 193
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2B_PIG (Casein kinase II subunit beta OS=Sus scrofa GN=CSNK2B PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.945e-43 Identity = 86/185 (46.49%), Postives = 112/185 (60.54%), Query Frame = 1 Query: 1 GLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKATQSYVPRVFGFKLH 555 GL+ QVP+Y ALD+ILD+E Q++L+E AAEMLYGLIH RYILT++G+A M LEKY+ DFG CPRVYC QP LP+G SDIP + VK+YCPKC D+Y P+S + DGAYFGT FPH+ M + +P++ +VPR++GFK+H Sbjct: 38 GLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQM-----------------------------LEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIH 193
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2B_MOUSE (Casein kinase II subunit beta OS=Mus musculus GN=Csnk2b PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.945e-43 Identity = 86/185 (46.49%), Postives = 112/185 (60.54%), Query Frame = 1 Query: 1 GLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKATQSYVPRVFGFKLH 555 GL+ QVP+Y ALD+ILD+E Q++L+E AAEMLYGLIH RYILT++G+A M LEKY+ DFG CPRVYC QP LP+G SDIP + VK+YCPKC D+Y P+S + DGAYFGT FPH+ M + +P++ +VPR++GFK+H Sbjct: 38 GLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQM-----------------------------LEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIH 193
BLAST of FC931494 vs. ExPASy Swiss-Prot
Match: CSK2B_HUMAN (Casein kinase II subunit beta OS=Homo sapiens GN=CSNK2B PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.945e-43 Identity = 86/185 (46.49%), Postives = 112/185 (60.54%), Query Frame = 1 Query: 1 GLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVKFRV*SSVRVHC*FPFLLAIMLCWELLQLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKATQSYVPRVFGFKLH 555 GL+ QVP+Y ALD+ILD+E Q++L+E AAEMLYGLIH RYILT++G+A M LEKY+ DFG CPRVYC QP LP+G SDIP + VK+YCPKC D+Y P+S + DGAYFGT FPH+ M + +P++ +VPR++GFK+H Sbjct: 38 GLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQM-----------------------------LEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIH 193 The following BLAST results are available for this feature:
BLAST of FC931494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931494 ID=FC931494; Name=FC931494; organism=Citrus clementina; type=EST; length=760bpback to top |