FC931543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931543 vs. ExPASy Swiss-Prot
Match: ATX3H_ARATH (Ataxin-3 homolog OS=Arabidopsis thaliana GN=At3g54130 PE=2 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 2.662e-78 Identity = 142/163 (87.12%), Postives = 148/163 (90.80%), Query Frame = 1 Query: 193 MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGR-VPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLK 678 ME SNGGMLYHEVQES LCAVHCVNTVLQGPFFSEFDLAA+A+DLD ERQVMLEG V + GDFL EESHNVSL GDFSIQVLQKALEVWDLQVIPLNCP AEPAQIDPELE+AFICHLHDHWFCIRKVNGEWYNFDSL AAP+HLSKFYLSA+LDSLK Sbjct: 1 MERTSNGGMLYHEVQESNLCAVHCVNTVLQGPFFSEFDLAAVAADLDGKERQVMLEGAAVGGFAPGDFLAEESHNVSLGGDFSIQVLQKALEVWDLQVIPLNCPDAEPAQIDPELESAFICHLHDHWFCIRKVNGEWYNFDSLLAAPQHLSKFYLSAFLDSLK 163
BLAST of FC931543 vs. ExPASy Swiss-Prot
Match: ATX3_ORYSJ (Putative ataxin-3 homolog OS=Oryza sativa subsp. japonica GN=Os01g0851400 PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.239e-67 Identity = 127/163 (77.91%), Postives = 137/163 (84.05%), Query Frame = 1 Query: 202 ASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASS--GDFLTEE--SHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLK 678 ASNGG+LYHEVQE KLCAVHCVNT LQGPFFSEFDL+ALA DLD+ ERQVM EG AA++ GDFL E SHNVSL GDFSIQVLQKALEVWDLQVIPL+ P DPELE AFICHL DHWFCIRKVNGEWYNF+SLY APEHLSKFYLSA++D+LK Sbjct: 7 ASNGGLLYHEVQEGKLCAVHCVNTTLQGPFFSEFDLSALAVDLDQRERQVMSEGAAGAATTAAGDFLAEGEGSHNVSLGGDFSIQVLQKALEVWDLQVIPLDSPDVGSCLFDPELETAFICHLQDHWFCIRKVNGEWYNFNSLYPAPEHLSKFYLSAFIDTLK 169
BLAST of FC931543 vs. ExPASy Swiss-Prot
Match: ATX3_HUMAN (Ataxin-3 OS=Homo sapiens GN=ATXN3 PE=1 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 2.208e-32 Identity = 66/153 (43.14%), Postives = 96/153 (62.75%), Query Frame = 1 Query: 220 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLK 678 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+VW L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ Sbjct: 4 IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERMRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQ 156
BLAST of FC931543 vs. ExPASy Swiss-Prot
Match: ATX3_RAT (Ataxin-3 OS=Rattus norvegicus GN=Atxn3 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.766e-32 Identity = 66/153 (43.14%), Postives = 96/153 (62.75%), Query Frame = 1 Query: 220 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLK 678 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+VW L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ Sbjct: 4 IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERLRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQ 156
BLAST of FC931543 vs. ExPASy Swiss-Prot
Match: ATX3_MOUSE (Ataxin-3 OS=Mus musculus GN=Atxn3 PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.766e-32 Identity = 66/153 (43.14%), Postives = 96/153 (62.75%), Query Frame = 1 Query: 220 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLK 678 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+VW L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ Sbjct: 4 IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERLRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQ 156
BLAST of FC931543 vs. ExPASy Swiss-Prot
Match: ATX3_CHICK (Ataxin-3 OS=Gallus gallus GN=ATXN3 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32 Identity = 66/153 (43.14%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 220 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLK 678 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+VW L++I N P + IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ Sbjct: 4 IFHERQEGSLCAQHCLNNLLQGEYFSPVELSSIAQQLDEEERMRMAEGGVSSEEYRTFLQQPSVNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLGIDPINEKSFICNYKEHWFTVRKLGKQWFNLNSLLMGPELISDTYLALFLAQLQ 156
BLAST of FC931543 vs. ExPASy Swiss-Prot
Match: ATX3L_HUMAN (Putative ataxin-3-like protein OS=Homo sapiens GN=ATXN3L PE=5 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.525e-30 Identity = 68/156 (43.59%), Postives = 92/156 (58.97%), Query Frame = 1 Query: 220 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKALA 687 ++HE QE LCA HC+N +LQG +FS +LA++A LD ER M EG V + FL + S N+ G FSIQV+ AL+ W L++I N P + IDP E +FIC+ HWF IRK W+N +SL A PE +S L+ +L L+ A Sbjct: 4 IFHEKQEGFLCAQHCLNNLLQGEYFSPVELASIAHQLDEEERMRMAEGGVTSEEYLAFLQQPSENMDDTGFFSIQVISNALKFWGLEIIHFNNPEYQKLGIDPINERSFICNYKQHWFTIRKFGKHWFNLNSLLAGPELISDTCLANFLARLQQQA 159
BLAST of FC931543 vs. ExPASy Swiss-Prot
Match: ATX3_CAEEL (Ataxin-3 homolog OS=Caenorhabditis elegans GN=atx-3 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19 Identity = 50/154 (32.47%), Postives = 85/154 (55.19%), Query Frame = 1 Query: 220 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKA 681 ++ E QE+ LCA H +N +LQ + DL LA +D+ E+Q++ + + S N++ G FSIQVL+KALE + L++ + P + +P A+IC+L +HWF +RK +W+ +S+ P+ LS Y+S +L + + Sbjct: 10 IFFEHQEAALCAQHALNMLLQDALYKWQDLRDLAIQMDKMEQQIL--------GNANPTPGRSENMNESGYFSIQVLEKALETFSLKLTNIENPAMVDYKNNPLTARAYICNLREHWFVLRKFGNQWFELNSVNRGPKLLSDTYVSMFLHQVSS 155
BLAST of FC931543 vs. ExPASy Swiss-Prot
Match: ATX3_CAEBR (Ataxin-3 homolog OS=Caenorhabditis briggsae GN=atx-3 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18 Identity = 47/154 (30.52%), Postives = 82/154 (53.25%), Query Frame = 1 Query: 220 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKA 681 ++ E Q++ LCA H +N +LQ F+ +L LA +D+ E ++ + S N++ G FSIQV++KALE +DL++I + P + +P A++ +L +HWF +RK +W+ +S+ P+ L+ Y+ YL A Sbjct: 11 IFFERQQAALCAQHALNMLLQDSLFTYENLRDLARQMDQMEHDIL--------GNNANAVGRSENMNDSGFFSIQVIEKALETFDLKLINMENPAMAEFKANPLTARAYVLNLREHWFVLRKFGNQWFELNSVKNGPKLLTDTYVKEYLHQFAA 156 The following BLAST results are available for this feature:
BLAST of FC931543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931543 ID=FC931543; Name=FC931543; organism=Citrus clementina; type=EST; length=688bpback to top |