FC931637

Overview
NameFC931637
Unique NameFC931637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4470 contig Ccv1_Contig4470:6..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: HSP7S_PEA (Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.918e-66
Identity = 142/198 (71.72%), Postives = 154/198 (77.78%), Query Frame = 3
Query:   99 STTQIHSLGNIPLSSRRIKAASFQSSAPRTAFFGQALGRKPHFGLPNAAFLKLNNE---KNNTRRRCNVGPVRVVNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            S+ QIH LG    SS  +K  S  S   +T FFGQ L    H     AAF KL+++   K  T        +RVV+EKVVGIDLGTTNSAVAAMEGGKPTI+TNAEGQRTTPSVVAYTK GDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVD+ESKQVSYRV+RD+NGNVKLDCPAIGK FAAEEISA VLR L
Sbjct:    3 SSAQIHGLGTASFSS--LKKPSSISGNSKTLFFGQRLNSN-HSPFTRAAFPKLSSKTFKKGFT--------LRVVSEKVVGIDLGTTNSAVAAMEGGKPTIITNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDEESKQVSYRVIRDDNGNVKLDCPAIGKSFAAEEISAQVLRKL 189          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_GUITH (Chaperone protein dnaK OS=Guillardia theta GN=dnaK PE=3 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 5.507e-47
Identity = 92/121 (76.03%), Postives = 104/121 (85.95%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS VA MEGGKP ++ NAEG RTTPSVVAYTK GDRLVGQIAKRQAV+NP+NTF+SVKRFIGR+  EV +E KQVSY V  D NGN+KLDCP++ K+FA+EEISA VLR L
Sbjct:    3 KVVGIDLGTTNSVVAVMEGGKPAVIQNAEGFRTTPSVVAYTKTGDRLVGQIAKRQAVINPDNTFYSVKRFIGRRSEEVSEELKQVSYIVKTDSNGNIKLDCPSLKKEFASEEISAEVLRKL 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK2_THEEB (Chaperone protein dnaK2 OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.192e-47
Identity = 95/121 (78.51%), Postives = 106/121 (87.60%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVVAYTK GDRLVGQIAKRQAV+NPENTF+SVKRFIGR+  EV  E+ +VSY+V+ + NGNVKLDCPA+GKQFA EEISA VLR L
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAYTKNGDRLVGQIAKRQAVMNPENTFYSVKRFIGRRFDEVTHEATEVSYKVL-NVNGNVKLDCPALGKQFAPEEISAQVLRKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNY3 (Chaperone protein dnaK2 OS=Synechocystis sp. (strain PCC 6803) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.393e-47
Identity = 93/121 (76.86%), Postives = 103/121 (85.12%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVV Y K GDRLVGQIAKRQAV+NP NTF+SVKRFIGRK  E+ +E+ +V+Y VV+D NGNVKLDCPA GKQFA EEISA VLR L
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVGYAKNGDRLVGQIAKRQAVMNPGNTFYSVKRFIGRKFDEITNEATEVAYSVVKDGNGNVKLDCPAQGKQFAPEEISAQVLRKL 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_EMIHU (Chaperone protein dnaK OS=Emiliania huxleyi GN=dnaK PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.662e-46
Identity = 93/121 (76.86%), Postives = 107/121 (88.43%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS VA MEGGKPT++TN+EGQRTTPSVVAYTK GD LVGQIAKRQAV+NPENTF+SVKRFIGRK SEV +  +QV Y+V++ E+  +KLDCPA+GKQFA+EEISA VLR L
Sbjct:    3 KVVGIDLGTTNSVVAVMEGGKPTVITNSEGQRTTPSVVAYTKKGDLLVGQIAKRQAVINPENTFYSVKRFIGRKTSEVTEALRQVPYKVLQTED-IIKLDCPALGKQFASEEISAQVLRKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_GRATL (Chaperone protein dnaK OS=Gracilaria tenuistipitata var. liui GN=dnaK PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.558e-44
Identity = 90/121 (74.38%), Postives = 99/121 (81.82%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS +A MEGGKPT++ N EG RTTPSVVAYTK  D+LVGQIAKRQAV+NPENTF+SVKRFIGRK  E+ DE KQ SY V  D N NVKL+CPA+ K FA EEISA VLR L
Sbjct:    3 KVVGIDLGTTNSVIAVMEGGKPTVIPNKEGLRTTPSVVAYTKKQDKLVGQIAKRQAVMNPENTFYSVKRFIGRKKDELGDELKQSSYNVKTDINSNVKLECPALSKDFAPEEISAQVLRKL 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_CYAPA (Chaperone protein dnaK OS=Cyanophora paradoxa GN=dnaK-A PE=3 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.404e-42
Identity = 87/121 (71.90%), Postives = 100/121 (82.64%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            K+VGIDLGTTNS VA MEGGKPT++TNAEG RTTPSVVAYTK GDRLVGQIAKRQAV+NP NTF+SVKRFIGRK  EV +E+KQV Y+V   +  NV+++CPA+   F  EEISA VLR L
Sbjct:    3 KIVGIDLGTTNSVVAVMEGGKPTVITNAEGFRTTPSVVAYTKTGDRLVGQIAKRQAVLNPGNTFYSVKRFIGRKFDEVTEEAKQVPYKVTGTQ--NVRIECPALQTSFTPEEISAQVLRKL 121          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_ODOSI (Chaperone protein dnaK OS=Odontella sinensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.833e-42
Identity = 82/121 (67.77%), Postives = 104/121 (85.95%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS VAA+EGG+P+++ NAEG RTTPS+VAYTK  + LVGQIAKRQAV+NPENTFFSVKRFIG K  E+  +SK++ Y+VV+D+NGN+K++C ++ K+F+ EEISA VLR L
Sbjct:    3 KVVGIDLGTTNSVVAAIEGGQPSVIVNAEGLRTTPSIVAYTKKQELLVGQIAKRQAVINPENTFFSVKRFIGSKELEISADSKKLPYKVVKDQNGNIKINCSSLNKEFSPEEISAQVLRKL 123          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK2_ANASP (Chaperone protein dnaK2 OS=Anabaena sp. (strain PCC 7120) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.394e-42
Identity = 88/121 (72.73%), Postives = 100/121 (82.64%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVVA+ K GD LVGQIAKRQAV+NPENTF+SVKRFIGR+  EV +E+ +VSY+V+    GNVK+D P  GKQFA EEISA VLR L
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAFAKNGDTLVGQIAKRQAVMNPENTFYSVKRFIGRRYDEVTNEATEVSYKVL-SSGGNVKVDSPGAGKQFAPEEISAKVLRKL 122          
BLAST of FC931637 vs. ExPASy Swiss-Prot
Match: DNAK_THAPS (Chaperone protein dnaK OS=Thalassiosira pseudonana GN=dnaK PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.334e-42
Identity = 81/121 (66.94%), Postives = 102/121 (84.30%), Query Frame = 3
Query:  321 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAXVLRSL 683
            KVVGIDLGTTNS VAA+EGG+PT++TNAEG RTTPS+VAYTK  + LVGQ+AKRQ+VVN ENTFFSVKRFIG K  E+ +ESK++ Y+V++D NGN+K+ C ++ K F+ EEISA V+R L
Sbjct:    3 KVVGIDLGTTNSVVAAIEGGQPTVITNAEGFRTTPSIVAYTKKQELLVGQLAKRQSVVNAENTFFSVKRFIGCKADEISEESKELPYKVIKDSNGNIKIKCSSLNKDFSPEEISAQVIRKL 123          
The following BLAST results are available for this feature:
BLAST of FC931637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7S_PEA6.918e-6671.72Stromal 70 kDa heat shock-related protein, chlorop... [more]
DNAK_GUITH5.507e-4776.03Chaperone protein dnaK OS=Guillardia theta GN=dnaK... [more]
DNAK2_THEEB7.192e-4778.51Chaperone protein dnaK2 OS=Thermosynechococcus elo... [more]
DNAK2_SYNY39.393e-4776.86Chaperone protein dnaK2 OS=Synechocystis sp. (stra... [more]
DNAK_EMIHU4.662e-4676.86Chaperone protein dnaK OS=Emiliania huxleyi GN=dna... [more]
DNAK_GRATL2.558e-4474.38Chaperone protein dnaK OS=Gracilaria tenuistipitat... [more]
DNAK_CYAPA1.404e-4271.90Chaperone protein dnaK OS=Cyanophora paradoxa GN=d... [more]
DNAK_ODOSI1.833e-4267.77Chaperone protein dnaK OS=Odontella sinensis GN=dn... [more]
DNAK2_ANASP2.394e-4272.73Chaperone protein dnaK2 OS=Anabaena sp. (strain PC... [more]
DNAK_THAPS5.334e-4266.94Chaperone protein dnaK OS=Thalassiosira pseudonana... [more]

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Properties
Property NameValue
Genbank descriptionC34107D04EF PostHarvP1 Citrus clementina cDNA clone C34107D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931637 ID=FC931637; Name=FC931637; organism=Citrus clementina; type=EST; length=696bp
GAACCACTCCAACGCCCACCAAATACAAACCCTTATCTTCTCCACCAAAA
GAAAGTCAACATTTTCACAGACCCACAATCACAAACATGGCGACGTTTTC
AACAACCCAAATTCACTCTCTGGGTAACATTCCTTTGTCTTCAAGAAGGA
TTAAAGCCGCTAGTTTTCAATCATCCGCTCCGAGAACCGCCTTTTTCGGC
CAAGCACTGGGCAGAAAACCGCATTTTGGCCTCCCAAACGCGGCTTTTTT
GAAGTTAAACAATGAAAAAAACAATACTAGAAGAAGGTGTAACGTGGGTC
CGGTGAGAGTGGTGAATGAGAAGGTGGTGGGGATTGATTTGGGGACGACG
AATTCGGCGGTGGCGGCGATGGAAGGGGGGAAGCCGACGATAGTGACGAA
TGCCGAGGGGCAACGGACGACGCCGTCTGTGGTTGCGTATACGAAGATTG
GGGATAGGTTGGTGGGTCAAATTGCGAAGAGGCAGGCGGTTGTGAACCCG
GAGAACACCTTCTTTTCAGTGAAGAGGTTTATTGGGAGGAAGATGTCGGA
GGTTGATGATGAATCGAAGCAAGTTTCGTATAGAGTTGTGAGAGATGAGA
ATGGGAATGTGAAGTTGGATTGCCCTGCTATCGGTAAGCAGTTTGCTGCT
GAAGAGATTTCGGCTCANGTCTTGAGAAGCTTGTGGATGATGCATC
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