FC931729
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931729 vs. ExPASy Swiss-Prot
Match: ERF1X_ARATH (Eukaryotic peptide chain release factor subunit 1-1 OS=Arabidopsis thaliana GN=ERF1-1 PE=2 SV=2) HSP 1 Score: 299.286 bits (765), Expect = 2.681e-94 Identity = 150/177 (84.75%), Postives = 156/177 (88.14%), Query Frame = 2 Query: 131 MADGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 M D + DKN RGNGTSMISLIMPPRDQVSRVTKMLGDE+GTASNIKSRVNRQSVLGAITSAQQRLKLYN+VPPNGLVLYTGTIV +DGKEKKVTIDFEPFRPINASLYLCDNKFHT+ALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLP+ Sbjct: 1 MGDKNDDDKNIEIWKIKKLIKSLEAARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASNIKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVNEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPK 177 HSP 2 Score: 68.1662 bits (165), Expect = 2.681e-94 Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 Query: 658 KKHGRGGQSALRFARLRMEKRHNYVRKTAELAHSF 762 KKHGRGGQSALRFARLRMEKRHNYVRKTAELA + Sbjct: 177 KKHGRGGQSALRFARLRMEKRHNYVRKTAELATQY 211
BLAST of FC931729 vs. ExPASy Swiss-Prot
Match: ERF1Z_ARATH (Eukaryotic peptide chain release factor subunit 1-3 OS=Arabidopsis thaliana GN=ERF1-3 PE=2 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 1.724e-93 Identity = 150/177 (84.75%), Postives = 157/177 (88.70%), Query Frame = 2 Query: 131 MADGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 MAD QE+DKN RGNGTSMISLIMPPRDQV+RVTKML DE+GTASNIKSRVNRQSVL AITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPF+PINASLYLCDNKFHT+ LNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKF+VDLP+ Sbjct: 1 MAD-QESDKNIEIWKIKKLIKGLETARGNGTSMISLIMPPRDQVARVTKMLADEYGTASNIKSRVNRQSVLSAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEPLNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPK 176 HSP 2 Score: 69.3218 bits (168), Expect = 1.724e-93 Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 1 Query: 658 KKHGRGGQSALRFARLRMEKRHNYVRKTAELAHSF 762 KKHGRGGQSALRFARLRMEKRHNYVRKTAELA F Sbjct: 176 KKHGRGGQSALRFARLRMEKRHNYVRKTAELATQF 210
BLAST of FC931729 vs. ExPASy Swiss-Prot
Match: ERF1Y_ARATH (Eukaryotic peptide chain release factor subunit 1-2 OS=Arabidopsis thaliana GN=ERF1-2 PE=2 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 5.465e-92 Identity = 146/173 (84.39%), Postives = 151/173 (87.28%), Query Frame = 2 Query: 143 QETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 +E D N RGNGTSMISLIMPPRDQVSRVTKMLGDE+GTASNIKSRVNRQSVL AITSAQQRLKLYNKVP NGLVLYTGTIV DDGKEKKVT DFEPFRPINASLYLCDNKFHT+ALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKF+VDLP+ Sbjct: 3 EEADTNIEIWKIKKLIKGLESARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASNIKSRVNRQSVLSAITSAQQRLKLYNKVPTNGLVLYTGTIVNDDGKEKKVTFDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPK 175 HSP 2 Score: 69.3218 bits (168), Expect = 5.465e-92 Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 1 Query: 658 KKHGRGGQSALRFARLRMEKRHNYVRKTAELAHSF 762 KKHGRGGQSALRFARLRMEKRHNYVRKTAELA F Sbjct: 175 KKHGRGGQSALRFARLRMEKRHNYVRKTAELATQF 209
BLAST of FC931729 vs. ExPASy Swiss-Prot
Match: ERF1_POLMI (Eukaryotic peptide chain release factor subunit 1 OS=Polyandrocarpa misakiensis GN=ERF1 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 5.511e-83 Identity = 134/178 (75.28%), Postives = 146/178 (82.02%), Query Frame = 2 Query: 131 MADGQET-DKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 MA+ + T D+N RGNGTSMISLI+PP+DQVSRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKLYNKVPPNGLV+Y GTIVTD+GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D+KFGFIVMDGNG LFGTL GNTREVLHKF+VDLP+ Sbjct: 1 MAETETTADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQVSRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPK 178 HSP 2 Score: 63.929 bits (154), Expect = 5.511e-83 Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 1 Query: 658 KKHGRGGQSALRFARLRMEKRHNYVRKTAELA 753 KKHGRGGQSALRFARLRMEKRHNYVRK AE A Sbjct: 178 KKHGRGGQSALRFARLRMEKRHNYVRKVAETA 209
BLAST of FC931729 vs. ExPASy Swiss-Prot
Match: ERF1_DROME (Eukaryotic peptide chain release factor subunit 1 OS=Drosophila melanogaster GN=eRF1 PE=1 SV=2) HSP 1 Score: 260.766 bits (665), Expect = 1.025e-81 Identity = 130/176 (73.86%), Postives = 144/176 (81.82%), Query Frame = 2 Query: 140 GQET--DKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 G+ET D+N RGNGTSMISLI+PP+DQ+SRV+KML DEFGTASNIKSRVNR SVLGAITS Q RLKLY KVPPNGLV+Y GTIVT++GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D+KFGFIVMDGNG LFGTL GNTREVLHKF+VDLP+ Sbjct: 3 GEETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPK 178 HSP 2 Score: 64.6994 bits (156), Expect = 1.025e-81 Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 1 Query: 658 KKHGRGGQSALRFARLRMEKRHNYVRKTAELA 753 KKHGRGGQSALRFARLRMEKRHNYVRK AE+A Sbjct: 178 KKHGRGGQSALRFARLRMEKRHNYVRKVAEVA 209
BLAST of FC931729 vs. ExPASy Swiss-Prot
Match: ERF1_XENTR (Eukaryotic peptide chain release factor subunit 1 OS=Xenopus tropicalis GN=etf1 PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 2.966e-81 Identity = 128/175 (73.14%), Postives = 141/175 (80.57%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKLYNKVPPNGLV+Y GTIVT++GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D KFGFIV+DG+G LFGTL GNTREVLHKF+VDLP+ Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPK 178 HSP 2 Score: 63.929 bits (154), Expect = 2.966e-81 Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 1 Query: 658 KKHGRGGQSALRFARLRMEKRHNYVRKTAELA 753 KKHGRGGQSALRFARLRMEKRHNYVRK AE A Sbjct: 178 KKHGRGGQSALRFARLRMEKRHNYVRKVAETA 209
BLAST of FC931729 vs. ExPASy Swiss-Prot
Match: ERF1_XENLA (Eukaryotic peptide chain release factor subunit 1 OS=Xenopus laevis GN=etf1 PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 2.966e-81 Identity = 128/175 (73.14%), Postives = 141/175 (80.57%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKLYNKVPPNGLV+Y GTIVT++GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D KFGFIV+DG+G LFGTL GNTREVLHKF+VDLP+ Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPK 178 HSP 2 Score: 63.929 bits (154), Expect = 2.966e-81 Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 1 Query: 658 KKHGRGGQSALRFARLRMEKRHNYVRKTAELA 753 KKHGRGGQSALRFARLRMEKRHNYVRK AE A Sbjct: 178 KKHGRGGQSALRFARLRMEKRHNYVRKVAETA 209
BLAST of FC931729 vs. ExPASy Swiss-Prot
Match: ERF1_RAT (Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus GN=Etf1 PE=2 SV=3) HSP 1 Score: 259.996 bits (663), Expect = 2.966e-81 Identity = 128/175 (73.14%), Postives = 141/175 (80.57%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKLYNKVPPNGLV+Y GTIVT++GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D KFGFIV+DG+G LFGTL GNTREVLHKF+VDLP+ Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPK 178 HSP 2 Score: 63.929 bits (154), Expect = 2.966e-81 Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 1 Query: 658 KKHGRGGQSALRFARLRMEKRHNYVRKTAELA 753 KKHGRGGQSALRFARLRMEKRHNYVRK AE A Sbjct: 178 KKHGRGGQSALRFARLRMEKRHNYVRKVAETA 209
BLAST of FC931729 vs. ExPASy Swiss-Prot
Match: ERF1_RABIT (Eukaryotic peptide chain release factor subunit 1 OS=Oryctolagus cuniculus GN=ETF1 PE=2 SV=3) HSP 1 Score: 259.996 bits (663), Expect = 2.966e-81 Identity = 128/175 (73.14%), Postives = 141/175 (80.57%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKLYNKVPPNGLV+Y GTIVT++GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D KFGFIV+DG+G LFGTL GNTREVLHKF+VDLP+ Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPK 178 HSP 2 Score: 63.929 bits (154), Expect = 2.966e-81 Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 1 Query: 658 KKHGRGGQSALRFARLRMEKRHNYVRKTAELA 753 KKHGRGGQSALRFARLRMEKRHNYVRK AE A Sbjct: 178 KKHGRGGQSALRFARLRMEKRHNYVRKVAETA 209
BLAST of FC931729 vs. ExPASy Swiss-Prot
Match: ERF1_PONAB (Eukaryotic peptide chain release factor subunit 1 OS=Pongo abelii GN=ETF1 PE=2 SV=3) HSP 1 Score: 259.996 bits (663), Expect = 2.966e-81 Identity = 128/175 (73.14%), Postives = 141/175 (80.57%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKLYNKVPPNGLV+Y GTIVT++GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D KFGFIV+DG+G LFGTL GNTREVLHKF+VDLP+ Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPK 178 HSP 2 Score: 63.929 bits (154), Expect = 2.966e-81 Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 1 Query: 658 KKHGRGGQSALRFARLRMEKRHNYVRKTAELA 753 KKHGRGGQSALRFARLRMEKRHNYVRK AE A Sbjct: 178 KKHGRGGQSALRFARLRMEKRHNYVRKVAETA 209 The following BLAST results are available for this feature:
BLAST of FC931729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931729 ID=FC931729; Name=FC931729; organism=Citrus clementina; type=EST; length=771bpback to top |