FC931784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_BETVU (Eukaryotic translation initiation factor 6 (Fragment) OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.244e-78 Identity = 88/99 (88.89%), Postives = 96/99 (96.97%), Query Frame = 3 Query: 393 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI 689 +RIEE+LSALGNCIACND+VAL HTDLD+ETEE+IADVLGVEVF QTIAGNILVGSYC+ +N+GGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI Sbjct: 95 QRIEEKLSALGNCIACNDYVALTHTDLDKETEELIADVLGVEVFGQTIAGNILVGSYCAITNKGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI 193 HSP 2 Score: 131.724 bits (330), Expect = 6.244e-78 Identity = 65/79 (82.28%), Postives = 69/79 (87.34%), Query Frame = 2 Query: 158 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQ 394 MATRL FEN+CEVGVFSKLTNA+CLVAIGGSE+FYSTFE ELAD IPVVKTSI G RIIG NKNGLL+PHTTTDQ Sbjct: 1 MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFETELADYIPVVKTSIAGTRIIGPNVCRNKNGLLVPHTTTDQ 79
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_MOUSE (Eukaryotic translation initiation factor 6 OS=Mus musculus GN=Eif6 PE=1 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 2.145e-72 Identity = 85/108 (78.70%), Postives = 94/108 (87.04%), Query Frame = 3 Query: 387 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 Q +R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQT+A +LVGSYC FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VN Sbjct: 93 QIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVN 200 HSP 2 Score: 122.094 bits (305), Expect = 2.145e-72 Identity = 57/79 (72.15%), Postives = 67/79 (84.81%), Query Frame = 2 Query: 158 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQ 394 MA R FEN+CEVG F+KLTNA+CLVAIGGSE+FYS FE EL+D IPVV SI G RIIGR+CVGN++GLL+P+ TTDQ Sbjct: 1 MAVRASFENNCEVGCFAKLTNAYCLVAIGGSENFYSVFEGELSDAIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQ 79
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_YEAST (Eukaryotic translation initiation factor 6 OS=Saccharomyces cerevisiae GN=TIF6 PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 8.093e-72 Identity = 83/106 (78.30%), Postives = 97/106 (91.51%), Query Frame = 3 Query: 393 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 +R+EERLSALGN I CND+VAL H D+DRETEE+I+DVLGVEVFRQTI+GNILVGSYCS SN+GGLVHP TS++D +ELS+LLQVPLVAGTVNRGS V+GAG+ VN Sbjct: 95 QRVEERLSALGNVICCNDYVALVHPDIDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQGGLVHPQTSVQDQEELSSLLQVPLVAGTVNRGSSVVGAGMVVN 200 HSP 2 Score: 117.087 bits (292), Expect = 8.093e-72 Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 2 Query: 158 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQ 394 MATR FENS E+GVFSKLTN +CLVA+GGSE+FYS FEAEL D IP+V T+I G RIIGR+ GN+ GLL+P TTDQ Sbjct: 1 MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIGRMTAGNRRGLLVPTQTTDQ 79
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_HUMAN (Eukaryotic translation initiation factor 6 OS=Homo sapiens GN=EIF6 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 8.093e-72 Identity = 85/108 (78.70%), Postives = 94/108 (87.04%), Query Frame = 3 Query: 387 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 Q +R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQT+A +LVGSYC FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VN Sbjct: 93 QIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVN 200 HSP 2 Score: 120.168 bits (300), Expect = 8.093e-72 Identity = 55/79 (69.62%), Postives = 66/79 (83.54%), Query Frame = 2 Query: 158 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQ 394 MA R FEN+CE+G F+KLTN +CLVAIGGSE+FYS FE EL+D IPVV SI G RIIGR+CVGN++GLL+P+ TTDQ Sbjct: 1 MAVRASFENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQ 79
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_BOVIN (Eukaryotic translation initiation factor 6 OS=Bos taurus GN=EIF6 PE=2 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 1.795e-71 Identity = 85/108 (78.70%), Postives = 94/108 (87.04%), Query Frame = 3 Query: 387 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 Q +R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQT+A +LVGSYC FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VN Sbjct: 93 QIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVN 200 HSP 2 Score: 119.013 bits (297), Expect = 1.795e-71 Identity = 55/79 (69.62%), Postives = 66/79 (83.54%), Query Frame = 2 Query: 158 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQ 394 MA R FEN+CE+G F+KLTN++CLVAIGGSE+FYS FE ELA IPVV SI G RIIGR+CVGN++GLL+P+ TTDQ Sbjct: 1 MAVRASFENNCEIGCFAKLTNSYCLVAIGGSENFYSVFEGELAGTIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQ 79
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_SCHPO (Eukaryotic translation initiation factor 6 OS=Schizosaccharomyces pombe GN=tif6 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 4.740e-69 Identity = 80/106 (75.47%), Postives = 96/106 (90.57%), Query Frame = 3 Query: 393 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 +R++ERLSALGN +ACND+VAL H D++RETEEIIADVL VEVFRQT+AGN+L GSYC+ SN+G LVHP TSI++ DELS+LLQVPLVAGT+NRGS+VIGAGL VN Sbjct: 95 QRVDERLSALGNIVACNDYVALVHPDIERETEEIIADVLDVEVFRQTVAGNVLTGSYCALSNQGALVHPRTSIQEQDELSSLLQVPLVAGTINRGSDVIGAGLVVN 200 HSP 2 Score: 112.849 bits (281), Expect = 4.740e-69 Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 2 Query: 158 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTD 391 MA R FENS E+GVFS LTN++ LVA+GGSE+FYS FEAEL DV+PVV T+IGG RIIGRL GN+ GLL+P +TTD Sbjct: 1 MALRAQFENSNEIGVFSNLTNSYALVALGGSENFYSVFEAELGDVVPVVHTTIGGTRIIGRLTCGNRKGLLVPSSTTD 78
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_DROME (Probable eukaryotic translation initiation factor 6 OS=Drosophila melanogaster GN=eIF6 PE=2 SV=3) HSP 1 Score: 165.236 bits (417), Expect = 8.062e-69 Identity = 83/105 (79.05%), Postives = 92/105 (87.62%), Query Frame = 3 Query: 396 RIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 R+EERLSALGN IACND+VAL H DLD+ETEEIIADVL VEVFRQTIA N LVGSY SN+GG+VHP TSI+D DELS+LLQVPLVAGTVNRGSEV+ AG+ VN Sbjct: 96 RVEERLSALGNVIACNDYVALVHPDLDKETEEIIADVLKVEVFRQTIADNSLVGSYAVLSNQGGMVHPKTSIQDQDELSSLLQVPLVAGTVNRGSEVLAAGMVVN 200 HSP 2 Score: 117.087 bits (292), Expect = 8.062e-69 Identity = 54/79 (68.35%), Postives = 68/79 (86.08%), Query Frame = 2 Query: 158 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQ 394 MA R+ FEN+ ++GVF+KLTN +CLVAIGGSE+FYS FEAEL D IPVV ++GG RIIGRL VGN+NGLL+P++TTD+ Sbjct: 1 MALRVQFENNDDIGVFTKLTNTYCLVAIGGSETFYSAFEAELGDTIPVVHANVGGCRIIGRLTVGNRNGLLVPNSTTDE 79
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_DICDI (Probable eukaryotic translation initiation factor 6 OS=Dictyostelium discoideum GN=eif6 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.773e-66 Identity = 79/106 (74.53%), Postives = 93/106 (87.74%), Query Frame = 3 Query: 393 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 +RIEE+ SALGNCIA ND+VAL H D+DRETEEIIADVLGVEVFRQT++GN+LVG+YC+ +N+G LVHP TSI D DELS+LLQVPLVAGTVNRG+E + AG VN Sbjct: 95 QRIEEKFSALGNCIATNDYVALVHPDIDRETEEIIADVLGVEVFRQTVSGNVLVGTYCALTNQGALVHPMTSIADQDELSSLLQVPLVAGTVNRGNECVAAGCVVN 200 HSP 2 Score: 108.612 bits (270), Expect = 2.773e-66 Identity = 54/79 (68.35%), Postives = 61/79 (77.22%), Query Frame = 2 Query: 158 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQ 394 MATRL +ENSC+VGVF KLTN +CLV GS+ F T E LAD IPVV+TSI G RI+GRL GNKNGLLLP+T TDQ Sbjct: 1 MATRLQYENSCDVGVFLKLTNKYCLVGQCGSKQFLHTVENRLADHIPVVETSIAGTRIVGRLSAGNKNGLLLPNTCTDQ 79
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_ARATH (Eukaryotic translation initiation factor 6 OS=Arabidopsis thaliana GN=At2g39820 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 8.673e-62 Identity = 75/106 (70.75%), Postives = 92/106 (86.79%), Query Frame = 3 Query: 393 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 +RIEE + ALGN IACND+VAL H L+++TEEII+DVLGVEV+RQTIA N LVGSYCS SN GG+VH +T++E++ EL+ L+QVPLVAGTVNRGS+VI AGLTVN Sbjct: 97 QRIEEPICALGNAIACNDYVALVHPKLEKDTEEIISDVLGVEVYRQTIANNELVGSYCSLSNNGGMVHSNTNVEEMVELANLVQVPLVAGTVNRGSQVISAGLTVN 202 HSP 2 Score: 103.605 bits (257), Expect = 8.673e-62 Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 158 MATRLMFENS-CEVGVFSKLTNAFCLV-AIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQ 394 MATRL ++N+ CE+GVFSKLTNA+CLV A S +F++ +E++L VIP+V TSIGG+ IG LCVGNKNGLLL HT TDQ Sbjct: 1 MATRLQYDNNNCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGTIGSLCVGNKNGLLLSHTITDQ 81
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_CAEEL (Eukaryotic translation initiation factor 6 OS=Caenorhabditis elegans GN=eif-6 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.707e-53 Identity = 62/106 (58.49%), Postives = 80/106 (75.47%), Query Frame = 3 Query: 393 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 +R++ERLSALGN IACNDHVA+ H ++ ETE+ + +VL VEVFR ++A N LVGSYC S+ G LV T E E++ LLQ+P+VAGT NRGSE+IGAG+ VN Sbjct: 95 RRVDERLSALGNVIACNDHVAIVHAEISAETEQALVEVLKVEVFRVSLAQNSLVGSYCILSSNGCLVAARTPPETQREIAALLQIPVVAGTCNRGSELIGAGMVVN 200 HSP 2 Score: 103.605 bits (257), Expect = 1.707e-53 Identity = 48/79 (60.76%), Postives = 64/79 (81.01%), Query Frame = 2 Query: 158 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQ 394 MA R+ +E S +VGVF LTN++CLV +GG+++FYS EAEL+D+IPVV TSI RI+GRL VGN++GLL+P+ TTDQ Sbjct: 1 MALRVDYEGSNDVGVFCTLTNSYCLVGVGGTQNFYSILEAELSDLIPVVHTSIASTRIVGRLTVGNRHGLLVPNATTDQ 79 The following BLAST results are available for this feature:
BLAST of FC931784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931784 ID=FC931784; Name=FC931784; organism=Citrus clementina; type=EST; length=712bpback to top |