FC931802
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931802 vs. ExPASy Swiss-Prot
Match: C3H41_ORYSJ (E3 ubiquitin-protein ligase makorin OS=Oryza sativa subsp. japonica GN=MKRN PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.209e-38 Identity = 82/182 (45.05%), Postives = 97/182 (53.30%), Query Frame = 1 Query: 196 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYASRCRYEHVK---------PXXXXXXXXXXXXXXXXXXXXXXGITKVPGAMPELSALSRPFL------PPNKTAWNPESVCNDSLE---NDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLH 687 +KRVLCKFF HGACLKGE+CEFSHDW D PNN+CT+YQKG CSY SRCRY+HVK P + + +S L P + + ESV D ++ + V L PAD ICSFAA GNCP GE+CP +HGD C TCGK CLH Sbjct: 3 TKRVLCKFFMHGACLKGEYCEFSHDWNDQPNNVCTFYQKGSCSYGSRCRYDHVKVSRNPTVAPPPSSSTTTRASSSLQPLSFGRPHHVGYQADSSNPRQQISMDVLAHSGSKPVWRNDFQHESVLEDGIDWSISPTVQNQTTLSPADLPICSFAAGGNCPYGEECPQMHGDLCTTCGKMCLH 184
BLAST of FC931802 vs. ExPASy Swiss-Prot
Match: C3H35_ARATH (E3 ubiquitin-protein ligase makorin OS=Arabidopsis thaliana GN=MKRN PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36 Identity = 75/168 (44.64%), Postives = 92/168 (54.76%), Query Frame = 1 Query: 193 MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYASRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGITKVPGAMPELSALSRPFLPPNKTAWNPESVCNDSLENDEVDEPRN---LKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLH 687 MS R+LCKFF HG+CLKGE+CEFSHD KDPPNN+CT+YQK C Y SRCRY+HV+ A L S + P +N++ D+ N + P + ICSFAAAG+CPRG +CPH+HGD C TCGK CLH Sbjct: 1 MSDRILCKFFVHGSCLKGENCEFSHDSKDPPNNVCTFYQKRICLYGSRCRYDHVR------------------------------AASNLPLSSDSESLDRSISTTPSRHLQQQGDNNDGDKSSNVYCIHPREYPICSFAAAGDCPRGNQCPHMHGDLCNTCGKKCLH 138
BLAST of FC931802 vs. ExPASy Swiss-Prot
Match: MKRN1_HUMAN (E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens GN=MKRN1 PE=1 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 54/191 (28.27%), Postives = 86/191 (45.03%), Query Frame = 1 Query: 196 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYASRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGITKVPGAMPELS---ALSR------------------PFLPPNKTAWNPESVCND-----SLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLH 687 +K+V C++F HG C +G++C +SHD D P + +C Y+Q+G+C Y RCRYEH KP ++ + G + E++ A SR F+P C + S+ +E ++ + + +C +AA G C GE C ++HGD+C CG LH Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHSKP-LKQEEATATELTTKSSLAASSSLSSIVGPLVEMNTGEAESRNSNFATVGAGSEDWVNAIEFVPGQPYCGRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQVLH 245
BLAST of FC931802 vs. ExPASy Swiss-Prot
Match: MKRN1_MOUSE (E3 ubiquitin-protein ligase makorin-1 OS=Mus musculus GN=Mkrn1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20 Identity = 54/191 (28.27%), Postives = 84/191 (43.98%), Query Frame = 1 Query: 196 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYASRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGITKVPGAMPELS---ALSR------------------PFLPPNKTAWNPESVCND-----SLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLH 687 +K+V C++F HG C +G++C +SHD D P +C Y+Q+G+C Y RCRYEH KP ++ G++ E++ A SR F+P C + S+ +E ++ + +C +AA G C GE C ++HGD+C CG LH Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHSKP-LKQEEVTATDLSAKPSLAASSSLSSGVGSLAEMNSGEAESRNPSFPTVGAGSEDWVNAIEFVPGQPYCGRTAPSCTEVPPQGSVTKEESEKEPTTVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQVLH 245
BLAST of FC931802 vs. ExPASy Swiss-Prot
Match: MKRN2_DANRE (Probable E3 ubiquitin-protein ligase makorin-2 OS=Danio rerio GN=mkrn2 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19 Identity = 60/203 (29.56%), Postives = 83/203 (40.89%), Query Frame = 1 Query: 196 SKRVLCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYASRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGITKVPGAMPELSA---LSRPFLPPNKTAWNPESVCNDSLENDEVDE-----------PRNLKPADRS------------------------ICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLH 687 +K+V C++F HG C +G C FSHD P+ IC YYQ+G C+Y RCRY+H+KP PG P + L +P + +K + S E+ E++E P + A RS IC F AAG C GE CP++HG+ C C + LH Sbjct: 3 TKQVTCRYFLHGVCREGSRCLFSHDLTTSKPSTICKYYQRGACAYGDRCRYDHIKPPGRGSGAPADHSNRSSSSAG----ASAPGPGPPANTSKHLKKPLVLRDKALCSDSRPRVFSAESSELNECWEQRDDGAQKPHSYLEAIRSGLDASAAAAATAGTFPELQQTSPQICPFLAAGQCQYGESCPYLHGEMCEICRQHVLH 201
BLAST of FC931802 vs. ExPASy Swiss-Prot
Match: MKRN2_XENLA (Probable E3 ubiquitin-protein ligase makorin-2 OS=Xenopus laevis GN=mkrn2 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19 Identity = 56/200 (28.00%), Postives = 80/200 (40.00%), Query Frame = 1 Query: 199 KRVLCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYASRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGITKVPGAMPELSALSRPFLP-----PNKT-AWNPESVCNDSLEN------------------------------DEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLH 687 K+V C++F HG C +G C FSHD P+ +C ++ +G C+Y +RCRY+HVKP + P P A P +P KT +C S++ DE +P + A + +C FA AG C G+ CP++HGD C CG LH Sbjct: 4 KQVTCRYFLHGVCREGSRCLFSHDLATSKPSTVCRFFLRGQCAYGTRCRYDHVKPCNGTVFIPPQEMSP---------VLSPPPLFPAQEAAVPPTIPAPQRREKKTLVLRDRDLCGASVDPALQPGCITESQGSEGEAKPHSYLEAICTGLDESQDPASYPGAPQQLCPFAQAGECHCGDSCPYLHGDACEICGLQVLH 194
BLAST of FC931802 vs. ExPASy Swiss-Prot
Match: MKRN1_SERQU (Probable E3 ubiquitin-protein ligase makorin-1 OS=Seriola quinqueradiata GN=mkrn1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19 Identity = 57/177 (32.20%), Postives = 78/177 (44.07%), Query Frame = 1 Query: 196 SKRVLCKFFAHGACLKGEHCEFSHDWKD--PPNNICTYYQKGFCSYASRCRYEHVKP------XXXXXXXXXXXXXXXXXXXXXXGITKVPGAMPELSALSRPFLPPNKTAWNPESVCNDSL-----ENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLH 687 +K V C++F HG C +G++C +SHD + P IC ++QKG C + RCR+EH KP G T VPGA ++A F+P E +S E D P N K + +C +AA G C G C ++HGD C CG LH Sbjct: 19 TKHVTCRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQKGNCVFGDRCRFEHCKPAKNEELPAPQMLPLPSASLAGPSDPEPSGPTPVPGAQDWVNAAE--FVPGQPYCGRAEQAKVESSVPLIEEFDSYPAPDN-KQLRKQLCPYAAVGECRYGINCAYLHGDVCYMCGLQVLH 192
BLAST of FC931802 vs. ExPASy Swiss-Prot
Match: MKRN2_MOUSE (Probable E3 ubiquitin-protein ligase makorin-2 OS=Mus musculus GN=Mkrn2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18 Identity = 61/203 (30.05%), Postives = 87/203 (42.86%), Query Frame = 1 Query: 196 SKRVLCKFFAHGACLKGEHCEFSHDWKDP-PNNICTYYQKGFCSYASRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXG------ITKV-------PGAMPE---------LSALSRPFLPPNKTAWNPESVCNDSLENDEVDEPRNLKPADRS----------------ICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLH 687 +K+V C++F HG C +G C FSHD + P+ IC YYQKG+C+Y +RCRY+H KP T V PG + L+ L+ PP+K N C+D + E+ +P + A R+ +C +AAAG C G+ C ++HGD C C LH Sbjct: 3 TKQVTCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGARCRYDHTKPPAAAGGAVGPAPNPSPSSGLHSPHPSPDIATSVMRTHSNEPGKREKKTLVLRDRNLTGLAEDKTPPSKV--NNPGGCSDPQTSPEM-KPHSYLDAIRTGLDDLEASSSYSNEPQLCPYAAAGECRLGDACVYLHGDMCEICRLQVLH 202
BLAST of FC931802 vs. ExPASy Swiss-Prot
Match: MKRN1_MACEU (E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii GN=MKRN1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.095e-18 Identity = 51/194 (26.29%), Postives = 80/194 (41.24%), Query Frame = 1 Query: 196 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYASRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGITKVPGAMPELSALSR------------------------PFLPPNKTAWNPESVCNDS-----LENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLH 687 +K+V C++F HG C KG +C +SHD + +C YYQ+G C+Y RCRYEH KP + +P + L+ +S F+P C ++ + +E+++ + + +C +AA G C GE C ++HGD C CG LH Sbjct: 52 TKQVTCRYFMHGVCKKGNNCRYSHDLSTSQSAMVCRYYQRGCCAYGDRCRYEHTKP----LKREEVTAANLAAKSDLPASSSLPALVEPLAEVSTGEAESVNSNFAAAGAGGEDWVNAIEFVPGQPYCGRAAPSCTEAPLQGMVIEEELEKQQTNVEMKKQLCPYAAVGECRYGENCVYLHGDACDMCGLQVLH 241
BLAST of FC931802 vs. ExPASy Swiss-Prot
Match: MKRN2_SERQU (Probable E3 ubiquitin-protein ligase makorin-2 OS=Seriola quinqueradiata GN=mkrn2 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18 Identity = 57/201 (28.36%), Postives = 82/201 (40.80%), Query Frame = 1 Query: 196 SKRVLCKFFAHGACLKGEHCEFSHDWKDP-PNNICTYYQKGFCSYASRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGI--------TKVPGAMPE----------LSALSRPFLPPNKTAWNPESVCN-------------DSLENDEVDEP-----RNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLH 687 +K+V C++F HG C +G C FSHD + P+ IC +YQ+G C+Y RCRY+H+KP G V G M + + + R F P + W+ S D+ D+ P +NL +C +AA G+C E C ++HGD C CG LH Sbjct: 3 TKQVTCRYFLHGVCREGSRCLFSHDLNNSKPSTICKFYQRGVCAYGERCRYDHIKPSSRGGGGGAPEDQAGGGGAGGGGAGIGGAGGGPSVRGGMKKNLVLRDRVLGVDRVDRMFGAPADSMWSDVSTAAAPHSYVEAIRTGLDASAQDQATPPVCGPSQNLP----QLCPYAANGHCFYEENCTYLHGDLCEVCGLQVLH 199 The following BLAST results are available for this feature:
BLAST of FC931802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931802 ID=FC931802; Name=FC931802; organism=Citrus clementina; type=EST; length=689bpback to top |