FC931839
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931839 vs. ExPASy Swiss-Prot
Match: PR1B4_ARATH (PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 7.830e-70 Identity = 130/208 (62.50%), Postives = 159/208 (76.44%), Query Frame = 3 Query: 69 MTSASPPVLPISNXXXXXXXXXXXXXXXXXXXXTPAFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQSLLPTRILVFIGGA 692 M S++PPVLPISN TPAFR IN I+++++ G ++RRPWAELADRSA SKPES S+A +RIRKNYSYF+VNYLTV ++ FSL+T+PFSL+ L+ LLASW+FLYLFRP+DQP+V+FGRTFS+RETLG LI+ SIFV FLT VGS+L+SA+M+G LICAHGAFR PEDLFLDEQ T L F+GGA Sbjct: 1 MASSAPPVLPISNPQTVPSAAPSSVESQPPIA-TPAFRNFINQITETVKNGLSKRRPWAELADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHGAFRAPEDLFLDEQEPAATGFLSFLGGA 207
BLAST of FC931839 vs. ExPASy Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 7.848e-62 Identity = 117/205 (57.07%), Postives = 152/205 (74.15%), Query Frame = 3 Query: 78 ASPPVLPISNXXXXXXXXXXXXXXXXXXXXTPAFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQSLLPTRILVFIGGA 692 A+PP LPIS+ TPAFR ++ +S S+R +QRRPW EL DRSA S+PES ++A RIR+N YF+VNY+T+V++V+A SL+++PFSLL+L+ L +WIFLYLFRPSDQPLVV GRTFS+RETLGVL++L+I V FLTSVGS+L SA+M+G G++C HGAFRVPEDLFLD+Q T +L F+ GA Sbjct: 3 ANPPTLPISDHSGGGSQSQQPVS-------TPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDDQEPANTGLLSFLSGA 200
BLAST of FC931839 vs. ExPASy Swiss-Prot
Match: PR1B1_ARATH (PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.218e-59 Identity = 110/205 (53.66%), Postives = 148/205 (72.20%), Query Frame = 3 Query: 78 ASPPVLPISNXXXXXXXXXXXXXXXXXXXXTPAFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQSLLPTRILVFIGGA 692 A+PP LP++N TPAFR + +S S+R G +QRRPW EL DRS+ ++PES ++A RIRKN +YF+VNY+ +V++V+AFSL ++P SLL+L+GLL W+FLYLFRPSDQPLVVFGRTFS+RETL L++ +I V F+TSVGS+L SA+M+G ++C HGAF VP+DLFLDEQ +L F+GG+ Sbjct: 2 ATPPTLPVTNQQAVQSQPPIN---------TPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLDEQEPANAGLLSFLGGS 197
BLAST of FC931839 vs. ExPASy Swiss-Prot
Match: PR1B5_ARATH (PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.456e-57 Identity = 111/206 (53.88%), Postives = 145/206 (70.39%), Query Frame = 3 Query: 69 MTSASPPVLPISNXXXXXXXXXXXXXXXXXXXXTPAFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQSLLPTRILVFIG 686 M S +PPVLPIS P RA +N +++++ G ++ RPW+EL DRSAF+KP+S SEA R RKN SYFRVNY+ +VA+++ FSL+ +PFSL++L+ L ASW+FLYLFRPSD+PL++FGR+FSE ETLG LI+ +I V F TSVGS+LISA+M+G IC HGAFR P+DLFLDEQ + L FIG Sbjct: 1 MVSTNPPVLPISTTATDTTNQPPIVTAVVESQP-PVVRAFVNGVTETVCGGLSRSRPWSELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHGAFRAPDDLFLDEQDHAASGFLSFIG 205
BLAST of FC931839 vs. ExPASy Swiss-Prot
Match: PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 7.115e-55 Identity = 105/206 (50.97%), Postives = 148/206 (71.84%), Query Frame = 3 Query: 75 SASPPVLPISNXXXXXXXXXXXXXXXXXXXXTPAFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQSLLPTRILVFIGGA 692 S+SP +LP++N + AFR ++ +S SLR +QRRPW EL DRS+F++P+S +++ RIRKN +YF+VNY +V++V+AFSL+++PFSLL+L+ LL SW+FLYLFR SDQPLV+FGR+FS+RETL L++ +I V F+TSVGS+L SA+ +G ++C HGAFRVP+DLFLDEQ +L FIG + Sbjct: 2 SSSPAILPVTNQQAATQSQPPIN--------SHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEPANAGLLSFIGNS 199
BLAST of FC931839 vs. ExPASy Swiss-Prot
Match: PR1B6_ARATH (PRA1 family protein B6 OS=Arabidopsis thaliana GN=PRA1B6 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.772e-51 Identity = 93/169 (55.03%), Postives = 129/169 (76.33%), Query Frame = 3 Query: 174 AFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQSLLPTRILVF 680 + R L++ + ++R+ A RPWAEL DRSAFS+P S SEAT R+RKN+SYFR NY+T+VA+++A SL+T+PF+L +L L ASW+FLY FRP+DQPLV+ GRTFS+ ETLG+L + ++ V F+TSVGS+L+S + VG + HGAFR PEDLFL+EQ + + + F Sbjct: 25 SLRVLLSRVLATVRHASADARPWAELVDRSAFSRPPSLSEATSRVRKNFSYFRANYITLVAILLAASLLTHPFALFLLASLAASWLFLYFFRPADQPLVIGGRTFSDLETLGILCLSTVVVMFMTSVGSLLMSTLAVGIMGVAIHGAFRAPEDLFLEEQEAIGSGLFAF 193
BLAST of FC931839 vs. ExPASy Swiss-Prot
Match: PR1F1_ARATH (PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.184e-25 Identity = 64/164 (39.02%), Postives = 91/164 (55.49%), Query Frame = 3 Query: 171 PAFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLF-LDEQSLL 659 P + I+ R G A RRPW ++ D +F+ P + RIR N YF+ NY VV + SLI NPFSLL+L+ LL +W+FLY R D+PL VF R R L ++ V+++ + FLT + A++ GA + +H A R EDLF DE++ L Sbjct: 16 PKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVITRIRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLR--DEPLTVFDREIDHRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEETSL 177
BLAST of FC931839 vs. ExPASy Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24 Identity = 59/148 (39.86%), Postives = 87/148 (58.78%), Query Frame = 3 Query: 210 LRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQS 653 ++ G A RR W + D + P S+A RI+ N +YFR+NY VV +VI FSLI +P SL++ L+ WIFLY R D+P+ +F +R L VL VL++ + LT+ ++ A++ GA L+ H R EDLFLDE++ Sbjct: 29 IKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLR--DEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEA 174
BLAST of FC931839 vs. ExPASy Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.468e-23 Identity = 59/159 (37.11%), Postives = 89/159 (55.97%), Query Frame = 3 Query: 189 INHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQSLLPT 665 I+ ++ G A RRPW + D + + P F +A RI+ N YFR NY V ++ SL+ +P SL++L L+ WIFLY R D+PLVVFG +R L L VL++ + LT S ++ +++ A L+ H A R ++LFLDE++ T Sbjct: 22 ISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLR--DEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVT 178
BLAST of FC931839 vs. ExPASy Swiss-Prot
Match: PRA1E_ARATH (PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23 Identity = 49/140 (35.00%), Postives = 82/140 (58.57%), Query Frame = 3 Query: 234 RPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQS 653 RPW E+ D SA S P + EA ++ N SYFR NY V ++ LI +P S++ + + WI LY R ++ +V+ G+ ++ L +L ++++ T VG ++ ++++G ++ AHGAFR +DLFLDE+S Sbjct: 48 RPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEES 187 The following BLAST results are available for this feature:
BLAST of FC931839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931839 ID=FC931839; Name=FC931839; organism=Citrus clementina; type=EST; length=693bpback to top |