FC931883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHM_EUCGU (Malate dehydrogenase, mitochondrial OS=Eucalyptus gunnii GN=MDH PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.041e-60 Identity = 119/150 (79.33%), Postives = 131/150 (87.33%), Query Frame = 2 Query: 83 MRSSVLRSVKTLAKPAGAR------GYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 MR+S+LR +++ + A R Y SESVP+RKVAVLGAAGGIGQPLALLMKLNPLVS+LALYDIA TPGVAADVGHINTRSEVAGY+G +QLGQALE SDVVIIPAGVP KPGMTRDDLFNINAGIVK LC+AIAKYCPNA+VNMI Sbjct: 1 MRASMLRLIRSRSSSAAPRPHLLRRAYGSESVPERKVAVLGAAGGIGQPLALLMKLNPLVSQLALYDIAGTPGVAADVGHINTRSEVAGYVGEEQLGQALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNAVVNMI 150
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHM_CITLA (Malate dehydrogenase, mitochondrial OS=Citrullus lanatus GN=MMDH PE=1 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 2.565e-59 Identity = 113/150 (75.33%), Postives = 132/150 (88.00%), Query Frame = 2 Query: 83 MRSSVLRSVKTLAKPAGA------RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 M++S+LRSV++ + + R +++ESVP+RKVAVLGAAGGIGQPLALLMKLNPLVS+LALYDIA TPGVAADVGH+NTRSEV GY+G +QLG+ALE SDVVIIPAGVP KPGMTRDDLFNINAGIVK LC+AIAKYCPNA++NMI Sbjct: 1 MKASILRSVRSAVSRSSSSNRLLSRSFATESVPERKVAVLGAAGGIGQPLALLMKLNPLVSKLALYDIAGTPGVAADVGHVNTRSEVTGYVGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNALINMI 150
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHM2_ARATH (Malate dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=At3g15020 PE=1 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 4.096e-57 Identity = 109/143 (76.22%), Postives = 126/143 (88.11%), Query Frame = 2 Query: 86 RSSVLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 RS ++RS + + RG++SESVPDRKV +LGAAGGIGQPL+LLMKLNPLVS L+LYDIANTPGVAADVGHINTRS+V+GYMG+D LG+ALE +D+VIIPAGVP KPGMTRDDLFNINAGIVK+L AIAKYCP A+VNMI Sbjct: 3 RSMIVRSASPVKQGLLRRGFASESVPDRKVVILGAAGGIGQPLSLLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVSGYMGDDDLGKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLSIAIAKYCPQALVNMI 145
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHM1_ARATH (Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 5.349e-57 Identity = 109/143 (76.22%), Postives = 126/143 (88.11%), Query Frame = 2 Query: 86 RSSVLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 RS ++RS + + R +SS SVP+RKVA+LGAAGGIGQPLALLMKLNPLVS L+LYDIANTPGVAADVGHINTRSEV GYMG+D L +ALE +D+VIIPAGVP KPGMTRDDLFNINAGIVK+LC+AIAKYCP+A++NMI Sbjct: 3 RSMLVRSSASAKQAVIRRSFSSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSEVVGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPHALINMI 145
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHM_FRAAN (Malate dehydrogenase, mitochondrial OS=Fragaria ananassa GN=MMDHI PE=1 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.556e-56 Identity = 112/141 (79.43%), Postives = 124/141 (87.94%), Query Frame = 2 Query: 92 SVLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 S++RSV +A+ RGYSSESVP RKVAVLGAAGGIGQPLALLMKLNPLVS+L+LYDIA TPGVAADV HINTRSEV GY G +QLG+ALE DVVIIPAGVP KPGMTRDDLFNINAGIV+ L +AIAKYCP+AI+NMI Sbjct: 6 SLIRSVSRVAR----RGYSSESVPQRKVAVLGAAGGIGQPLALLMKLNPLVSQLSLYDIAGTPGVAADVSHINTRSEVKGYAGEEQLGEALEGCDVVIIPAGVPRKPGMTRDDLFNINAGIVRSLTAAIAKYCPHAIINMI 142
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHM_BRANA (Malate dehydrogenase, mitochondrial OS=Brassica napus GN=MDH PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 5.914e-56 Identity = 109/143 (76.22%), Postives = 126/143 (88.11%), Query Frame = 2 Query: 86 RSSVLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 RS+++RS + + R +SS SVP+RKVA+LGAAGGIGQPLALLMKLNPLVS L+LYDIANTPGVAADVGHINTRS+V GYMG+D L +ALE +D+VIIPAGVP KPGMTRDDLFNINAGIVK+L SAIAKYCP+A+VNMI Sbjct: 3 RSALVRSSASAKQSLLRRSFSSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVVGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLWSAIAKYCPHALVNMI 145
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3) HSP 1 Score: 173.711 bits (439), Expect = 4.396e-43 Identity = 93/149 (62.42%), Postives = 108/149 (72.48%), Query Frame = 2 Query: 71 PATKMRSS-VLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 PA++M S +LR AK A P KVA+LGA+GGIGQPLALLMK+NPLVS L LYD+ NTPGV AD+ H+NT + V G++G QL AL D+VIIPAGVP KPGMTRDDLFNINAGIV+ LC IAK CPNAIVN+I Sbjct: 21 PASQMEESPLLRGSNCRAKGAA---------PGFKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVI 160
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.414e-41 Identity = 89/142 (62.68%), Postives = 104/142 (73.24%), Query Frame = 2 Query: 89 SSVLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 SSVLR AK GA G+ KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+ N PGV AD+ H++T + V G++G QL +AL D+V+IPAGVP KPGMTRDDLF INAGIVK LC IAK CP AIVN+I Sbjct: 28 SSVLRRANCRAK-GGAPGF--------KVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLERALTGMDLVVIPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPTAIVNLI 160
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 2.412e-41 Identity = 82/115 (71.30%), Postives = 95/115 (82.61%), Query Frame = 2 Query: 170 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+ NTPGV +D+ H++T + V G++G QL AL D+VIIPAGVP KPGMTRDDLFNINAGIVK LC AIAK CP AIVN+I Sbjct: 43 KVAILGAAGGIGQPLAMLMKMNPLVSLLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALIGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVNVI 157
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHM_MOUSE (Malate dehydrogenase, mitochondrial OS=Mus musculus GN=Mdh2 PE=1 SV=3) HSP 1 Score: 167.162 bits (422), Expect = 4.115e-41 Identity = 86/139 (61.87%), Postives = 108/139 (77.70%), Query Frame = 2 Query: 107 VKTLAKPAGA---RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 + LA+PAGA R +S+ + + KVAVLGA+GGIGQPL+LL+K +PLVSRL LYDIA+TPGVAAD+ HI TR+ V GY+G +QL L+ DVV+IPAGVP KPGMTRDDLFN NA IV L +A A++CP A+V +I Sbjct: 2 LSALARPAGAALRRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMVCII 140 The following BLAST results are available for this feature:
BLAST of FC931883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 189
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931883 ID=FC931883; Name=FC931883; organism=Citrus clementina; type=EST; length=516bpback to top |