FC931910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931910 vs. ExPASy Swiss-Prot
Match: STHY_ARATH (Probable salt tolerance-like protein At1g78600 OS=Arabidopsis thaliana GN=At1g78600 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 7.940e-22 Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 3 Query: 369 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGL-ANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKR--THGRYLL 644 C+VCE+A A + C ADEAALC +CDEK+H NKLA +H RV L A+ S +P+CDIC+ A FF+C D + LC +CD+ +H H R+LL Sbjct: 5 CNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLL 99
BLAST of FC931910 vs. ExPASy Swiss-Prot
Match: STO_ARATH (Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.690e-20 Identity = 47/94 (50.00%), Postives = 60/94 (63.83%), Query Frame = 3 Query: 369 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPS-DVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HGRYL 641 CDVCE A A + C ADEAALC CD ++H NKLAS+H R+ L + S PRCDIC+ AF +C D + LC CD ++HV R+ H R+L Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFL 98
BLAST of FC931910 vs. ExPASy Swiss-Prot
Match: STHX_ARATH (Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.431e-20 Identity = 45/98 (45.92%), Postives = 60/98 (61.22%), Query Frame = 3 Query: 369 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPS----DVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HGRYLL 644 CDVC+ A +FC ADEA+LC CD +VH NKLAS+H+R L PS P CDIC++ A +C+ D + LC CD ++H + T H R+LL Sbjct: 5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLL 102
BLAST of FC931910 vs. ExPASy Swiss-Prot
Match: STH_ARATH (Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18 Identity = 49/100 (49.00%), Postives = 57/100 (57.00%), Query Frame = 3 Query: 369 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPS-DVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HGRYLLLRQRV 659 CDVCE A A L C ADEAALC CD +VH NKLAS+H R+ L + S P CDIC AF +C D + LC CD H R+ H R+L RV Sbjct: 5 CDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRV 104
BLAST of FC931910 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.326e-18 Identity = 42/81 (51.85%), Postives = 51/81 (62.96%), Query Frame = 3 Query: 366 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVH 608 LCD C+S AA LFC AD A LC CD K+H NKLASRH RV L C++CE APA C+ D ++LC+ CD +H Sbjct: 7 LCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL--------CEVCEQAPAHVTCKADAAALCVTCDRDIH 79
BLAST of FC931910 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 6.955e-18 Identity = 41/81 (50.62%), Postives = 51/81 (62.96%), Query Frame = 3 Query: 366 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVH 608 LCD C+SA A L+C D A LC SCD KVH NKLASRH RV + C++CE APA C+ D ++LC+ CD +H Sbjct: 5 LCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM--------CEVCEQAPAHVTCKADAAALCVTCDRDIH 77
BLAST of FC931910 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17 Identity = 44/95 (46.32%), Postives = 54/95 (56.84%), Query Frame = 3 Query: 369 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGG--KRTHGRYLLL 647 CD C SAA ++C AD A LC SCD +VH N+LASRH RV + C CE APA F+C+ D +SLC CD +H R H R +L Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV--------CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPIL 98
BLAST of FC931910 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.713e-16 Identity = 44/95 (46.32%), Postives = 53/95 (55.79%), Query Frame = 3 Query: 369 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGG--KRTHGRYLLL 647 CD C S A ++C AD A LC SCD +VH N++ASRH RV + C+ CE APA F CE D +SLC CD VH R H R +L Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV--------CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPIL 106
BLAST of FC931910 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.713e-16 Identity = 42/95 (44.21%), Postives = 54/95 (56.84%), Query Frame = 3 Query: 369 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGG--KRTHGRYLLL 647 CD C SAA ++C AD A LC +CD +VH N++ASRH RV + C CE+APA F C+ D +SLC CD +H R H R +L Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV--------CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPIL 102
BLAST of FC931910 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15 Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 3 Query: 366 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRTHGR 635 LCD C+S+ A+++C AD A LC +CD++VH+ N+L ++H R L CD C +P+ +CE + S LC CD H H R Sbjct: 12 LCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL--------CDSCNESPSSLFCETERSVLCQNCDWQHHTASSSLHSR 93 The following BLAST results are available for this feature:
BLAST of FC931910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931910 ID=FC931910; Name=FC931910; organism=Citrus clementina; type=EST; length=693bpback to top |