FC931954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 444.891 bits (1143), Expect = 1.881e-124 Identity = 225/229 (98.25%), Postives = 227/229 (99.13%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDV+YNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKT+LAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMA NR DTLD Sbjct: 80 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLD 308
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 436.802 bits (1122), Expect = 5.123e-122 Identity = 221/229 (96.51%), Postives = 224/229 (97.82%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 GQFMEM+DQNN IVGSTTGSNYYVRILSTINRELLKPSASV L RHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKT+LAKAVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMA NR DTLD Sbjct: 85 GQFMEMIDQNNAIVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLD 313
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 402.134 bits (1032), Expect = 1.398e-111 Identity = 201/229 (87.77%), Postives = 214/229 (93.45%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 GQF+E VDQN IVGSTTGSNYYVRILSTI+RELLKP+ASVALH+HSNALVDVLPPEADSSI +L+ +KPDV Y DIGG DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GKT+LAKAVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNVKVIMA NR DTLD Sbjct: 90 GQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD 318
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 402.134 bits (1032), Expect = 1.398e-111 Identity = 201/229 (87.77%), Postives = 214/229 (93.45%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 GQF+E VDQN IVGSTTGSNYYVRILSTI+RELLKP+ASVALH+HSNALVDVLPPEADSSI +L+ +KPDV Y DIGG DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GKT+LAKAVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNVKVIMA NR DTLD Sbjct: 90 GQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD 318
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 402.134 bits (1032), Expect = 1.398e-111 Identity = 201/229 (87.77%), Postives = 214/229 (93.45%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 GQF+E VDQN IVGSTTGSNYYVRILSTI+RELLKP+ASVALH+HSNALVDVLPPEADSSI +L+ +KPDV Y DIGG DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GKT+LAKAVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNVKVIMA NR DTLD Sbjct: 90 GQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD 318
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 402.134 bits (1032), Expect = 1.398e-111 Identity = 201/229 (87.77%), Postives = 214/229 (93.45%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 GQF+E VDQN IVGSTTGSNYYVRILSTI+RELLKP+ASVALH+HSNALVDVLPPEADSSI +L+ +KPDV Y DIGG DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GKT+LAKAVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNVKVIMA NR DTLD Sbjct: 90 GQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD 318
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 401.364 bits (1030), Expect = 2.385e-111 Identity = 201/229 (87.77%), Postives = 214/229 (93.45%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 GQF+E VDQN GIVGSTTGSNYYVRILSTI+RELLKPSASVALH+HSNALVDVLPPEADSSIS+L EKPDV Y+DIGG D QKQEIREAVELPLTH ELY+QIGI+PPRGVL+YGPPG GKT+LA AVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+PAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQT NVKVIMA NR DTLD Sbjct: 87 GQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLD 315
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 395.201 bits (1014), Expect = 1.709e-109 Identity = 197/229 (86.03%), Postives = 212/229 (92.58%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 GQF+E VDQN IV STTGSNYYVR++STI+RELLKP+ASVALH+HSNALVDVLPP ADSSI +L+ +KPDV Y DIGG DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GKT+LAKAVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNVKVIMA NR DTLD Sbjct: 90 GQFLEAVDQNTAIVASTTGSNYYVRMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD 318
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 3.017e-106 Identity = 190/229 (82.97%), Postives = 212/229 (92.58%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 GQFME +DQN GIV S+TGSNY VRILST++RE LKPS+SVALHRHSNALVD+LPPEADSSI++L ++EKPDVTY D+GG D+QKQEIREAVELPLT +LYKQIGIDPPRGVLLYGPPGTGKT+L KAVAN TTA+FIRV GSEFVQKYLGEGPRMVRDVFR+A+EN+PAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGF+Q+ NVKVIMA NR DTLD Sbjct: 91 GQFMEAIDQNTGIVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLD 319
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 382.104 bits (980), Expect = 1.498e-105 Identity = 188/229 (82.10%), Postives = 210/229 (91.70%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 GQF+E VDQN+ IVGSTTGSNYYVR+LS ++RELLKP SVALH++SNALVDVLPPEADSSI +L EKPD++Y DIGG D+QKQE+REAVELPLTH ELY+QIGIDPPRGVL+YGPPG GKT+LAKAVA +T A+FIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P+IIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ+ NVKVIMA NR DTLD Sbjct: 86 GQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLD 314 The following BLAST results are available for this feature:
BLAST of FC931954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 374
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931954 ID=FC931954; Name=FC931954; organism=Citrus clementina; type=EST; length=689bpback to top |