FC932010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A3_NICPL (Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 328.946 bits (842), Expect = 1.569e-89 Identity = 165/193 (85.49%), Postives = 177/193 (91.71%), Query Frame = 3 Query: 126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 ++VFET++GVE I SF MGIKDDLLRG+YQYGFEKPSAIQQRAV+ II GRDVIAQAQSGTGKTSMIALTVCQ VDT S EVQALILSPTRELA QTEKVIL IGD+IN+QAHAC+ GKSVGEDIRKLEHGV VVSGTPGRVCDMIKR+TLRTR IKLL+LDESDEMLSRGFK IYDVYRYLPP+LQVVLI Sbjct: 5 RLVFETSKGVEPIASFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMIALTVCQIVDTKSSEVQALILSPTRELAAQTEKVILAIGDYINVQAHACIGGKSVGEDIRKLEHGVQVVSGTPGRVCDMIKRRTLRTRGIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLI 197
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: RH2_ARATH (DEAD-box ATP-dependent RNA helicase 2 OS=Arabidopsis thaliana GN=RH2 PE=2 SV=2) HSP 1 Score: 325.479 bits (833), Expect = 1.735e-88 Identity = 162/193 (83.94%), Postives = 178/193 (92.23%), Query Frame = 3 Query: 126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 K+VFETT+G+E ITSF+ MGIK+D+LRG+Y+YGFEKPSAIQQRAVM I++GRDVIAQAQSGTGKTSMIAL+VCQ VDTSSREVQALILSPTRELATQTEK I IG NIQAHAC+ G SVGEDIRKLEHGVHVVSGTPGRVCDMIKR++LRTRAIKLL+LDESDEMLSRGFK IYDVYRYLPPDLQV L+ Sbjct: 22 KLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLV 214
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: RH2_ORYSJ (DEAD-box ATP-dependent RNA helicase 2 OS=Oryza sativa subsp. japonica GN=Os01g0639100 PE=2 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 2.506e-87 Identity = 159/192 (82.81%), Postives = 175/192 (91.15%), Query Frame = 3 Query: 129 MVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 + FET+ GVE I+SFD MGI+DDLLRGIY YGFEKPSAIQQRAV+ II GRDVIAQAQSGTGKTSMI+L+VCQ VDT+ REVQALILSPTRELA QTE+V+L IGDFINIQ HAC+ GKS+GEDIRKLEHGVHVVSGTPGRVCDMIKR+TLRTRAIKLL+LDE+DEML RGFK IYDVYRYLPP+LQV LI Sbjct: 19 LTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLI 210
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: RH34_ORYSJ (DEAD-box ATP-dependent RNA helicase 34 OS=Oryza sativa subsp. japonica GN=Os03g0566800 PE=2 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.624e-86 Identity = 157/192 (81.77%), Postives = 175/192 (91.15%), Query Frame = 3 Query: 129 MVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 + FET+ GVE I+SFD MGI++DLLRGIY YGFEKPSAIQQRAV+ II GRDVIAQAQSGTGKTSMI+L+VCQ VDT+ REVQALILSPTRELA QTE+V+L IGD+INIQ HAC+ GKS+GEDIRKLEHGVHVVSGTPGRVCDMIKR+TLRTRAIKLL+LDE+DEML RGFK IYDVYRYLPP+LQV LI Sbjct: 19 LTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLI 210
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: RH34_ARATH (DEAD-box ATP-dependent RNA helicase 34 OS=Arabidopsis thaliana GN=RH34 PE=2 SV=2) HSP 1 Score: 275.789 bits (704), Expect = 1.577e-73 Identity = 136/192 (70.83%), Postives = 164/192 (85.42%), Query Frame = 3 Query: 129 MVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 +VFETT+G++ I SFD MG+ D +LRG+Y YG++KPS IQQRA++ I+KGRDVIAQAQSGTGKTSMIA++VCQ V+ SSR+VQ L+LSP+RELA+QTEK I IG NIQAHAC+ GKS+GEDI+KLE GVH VSGTPGRV DMIKR +L+T+A+KLLVLDESDEMLS+G K IYDVYR LP D+QV LI Sbjct: 10 LVFETTKGIKPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVCLI 201
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: FAL1_USTMA (ATP-dependent RNA helicase FAL1 OS=Ustilago maydis GN=FAL1 PE=3 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 5.991e-73 Identity = 128/193 (66.32%), Postives = 165/193 (85.49%), Query Frame = 3 Query: 126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 K+ FE++E V+ T+FDAMG+K+DLLRGIY Y FEKPSAIQQRA++ II+GRDVIAQAQSGTGKT+ ++++ Q++DT+ RE QAL+LSPTRELA Q + V+L +GD++N+Q HAC+ G SVGEDIRKL++G H+VSGTPGRV DMI+R+ LRT+ IK+L+LDESDE+L+ GFK IYDVYRYLPP QVVL+ Sbjct: 11 KLAFESSEHVKVATTFDAMGLKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDVIAQAQSGTGKTATFSISMLQSIDTTLRETQALVLSPTRELAIQIQSVVLALGDYLNVQCHACIGGTSVGEDIRKLDYGQHIVSGTPGRVYDMIRRRHLRTKNIKMLILDESDELLNMGFKDQIYDVYRYLPPSTQVVLL 203
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A3_TAEGU (Eukaryotic initiation factor 4A-III OS=Taeniopygia guttata GN=EIF4A3 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.130e-71 Identity = 130/193 (67.36%), Postives = 163/193 (84.46%), Query Frame = 3 Query: 126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QSGTGKT+ +++V Q +D RE QALIL+PTRELA Q +K +L +GD++N+Q HAC+ G +VGEDIRKL++G HVV+GTPGRV DMI+R++LRTRAIK+LVLDE+DEML++GFK IYDVYRYLPP QVVLI Sbjct: 24 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 216
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A3_RAT (Eukaryotic initiation factor 4A-III OS=Rattus norvegicus GN=Eif4a3 PE=1 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.130e-71 Identity = 130/193 (67.36%), Postives = 163/193 (84.46%), Query Frame = 3 Query: 126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QSGTGKT+ +++V Q +D RE QALIL+PTRELA Q +K +L +GD++N+Q HAC+ G +VGEDIRKL++G HVV+GTPGRV DMI+R++LRTRAIK+LVLDE+DEML++GFK IYDVYRYLPP QVVLI Sbjct: 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 217
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A3_PIG (Eukaryotic initiation factor 4A-III OS=Sus scrofa GN=EIF4A3 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.130e-71 Identity = 130/193 (67.36%), Postives = 163/193 (84.46%), Query Frame = 3 Query: 126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QSGTGKT+ +++V Q +D RE QALIL+PTRELA Q +K +L +GD++N+Q HAC+ G +VGEDIRKL++G HVV+GTPGRV DMI+R++LRTRAIK+LVLDE+DEML++GFK IYDVYRYLPP QVVLI Sbjct: 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 217
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A3_HUMAN (Eukaryotic initiation factor 4A-III OS=Homo sapiens GN=EIF4A3 PE=1 SV=4) HSP 1 Score: 269.626 bits (688), Expect = 1.130e-71 Identity = 130/193 (67.36%), Postives = 163/193 (84.46%), Query Frame = 3 Query: 126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QSGTGKT+ +++V Q +D RE QALIL+PTRELA Q +K +L +GD++N+Q HAC+ G +VGEDIRKL++G HVV+GTPGRV DMI+R++LRTRAIK+LVLDE+DEML++GFK IYDVYRYLPP QVVLI Sbjct: 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 217 The following BLAST results are available for this feature:
BLAST of FC932010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932010 ID=FC932010; Name=FC932010; organism=Citrus clementina; type=EST; length=706bpback to top |