FC932371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932371 vs. ExPASy Swiss-Prot
Match: NDUAC_ARATH (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabidopsis thaliana GN=At3g03100 PE=1 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 8.732e-67 Identity = 114/153 (74.51%), Postives = 132/153 (86.27%), Query Frame = 2 Query: 62 KSALKSIRERGLGSFLRELKEEGFLRALLDGNLMQTKLHNRGATLVGVDKFGNKYYQKL-DEQFGRHRWVEYAEKSRYNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHRENLSGEGEEFIYHSKGHFLNPEHKDWSGYQPWEPSKKE 517 KSAL++IRE+GLG F+R ++EEGF+R L DGNL+QTK+HN GATLVGVDKFGNKYYQKL D Q+GRHRWVEYA K RYNASQVP EWHGWLH +TDHTGDELL LKPKRYGLEH+EN SGEG+ +IYHSKGH LNP K+W+ YQ W P+K + Sbjct: 7 KSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLGDTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKENFSGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKTQ 159
BLAST of FC932371 vs. ExPASy Swiss-Prot
Match: NDUAC_BOVIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Bos taurus GN=NDUFA12 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.149e-16 Identity = 50/132 (37.88%), Postives = 65/132 (49.24%), Query Frame = 2 Query: 71 LKSIRERGLGSFLRELKEEGFLRALLDGNLMQTKLHNRGATLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKSR-------YNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHRENLSGEGEEFIYHS 445 L + +RGL G+LR L N + R TLVG DK+GNKYY+ + FGRHRWV Y + + S VPPEWH WLHCMTD K H+ NLSG ++++ +S Sbjct: 3 LLQVLKRGLQQVSGHGGLRGYLRVLFRANDV------RVGTLVGEDKYGNKYYEDNKQFFGRHRWVIYTTEMNGKNTFWDVDGSMVPPEWHRWLHCMTDDPPTVKPPTARKFIWTNHKFNLSGTPQQYVPYS 128
BLAST of FC932371 vs. ExPASy Swiss-Prot
Match: NDUAC_GORGO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Gorilla gorilla gorilla GN=NDUFA12 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.013e-14 Identity = 46/132 (34.85%), Postives = 63/132 (47.73%), Query Frame = 2 Query: 71 LKSIRERGLGSFLRELKEEGFLRALLDGNLMQTKLHNRGATLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKSR-------YNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHRENLSGEGEEFIYHS 445 L + +RGL G+LR N + TLVG DK+GNKYY+ + FGRHRWV Y + + S VPPEWH WLH MTD + K H+ N++G E+++ +S Sbjct: 3 LVQVLKRGLQQITGHGGLRGYLRVFFRTNDAKV------GTLVGEDKYGNKYYEDNKQFFGRHRWVVYTTEMNGKNTFWDVDGSMVPPEWHRWLHSMTDDPPTTKPLTARKFIWTNHKFNMTGTPEQYVPYS 128
BLAST of FC932371 vs. ExPASy Swiss-Prot
Match: NDUAC_PANTR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Pan troglodytes GN=NDUFA12 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.323e-14 Identity = 46/132 (34.85%), Postives = 63/132 (47.73%), Query Frame = 2 Query: 71 LKSIRERGLGSFLRELKEEGFLRALLDGNLMQTKLHNRGATLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKSR-------YNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHRENLSGEGEEFIYHS 445 L + +RGL G+LR N + TLVG DK+GNKYY+ + FGRHRWV Y + + S VPPEWH WLH MTD + K H+ N++G E+++ +S Sbjct: 3 LVQVLKRGLQQITGHGGLRGYLRVFFRTNDAKV------GTLVGEDKYGNKYYEDNKQFFGRHRWVVYTTEMNGKNTFWDVDGSMVPPEWHRWLHSMTDDPPTTKPLTARKFIWTNHKFNVTGTPEQYVPYS 128
BLAST of FC932371 vs. ExPASy Swiss-Prot
Match: NDUAC_HUMAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Homo sapiens GN=NDUFA12 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.323e-14 Identity = 46/132 (34.85%), Postives = 63/132 (47.73%), Query Frame = 2 Query: 71 LKSIRERGLGSFLRELKEEGFLRALLDGNLMQTKLHNRGATLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKSR-------YNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHRENLSGEGEEFIYHS 445 L + +RGL G+LR N + TLVG DK+GNKYY+ + FGRHRWV Y + + S VPPEWH WLH MTD + K H+ N++G E+++ +S Sbjct: 3 LVQVLKRGLQQITGHGGLRGYLRVFFRTNDAKV------GTLVGEDKYGNKYYEDNKQFFGRHRWVVYTTEMNGKNTFWDVDGSMVPPEWHRWLHSMTDDPPTTKPLTARKFIWTNHKFNVTGTPEQYVPYS 128
BLAST of FC932371 vs. ExPASy Swiss-Prot
Match: NDUAC_CAEEL (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Caenorhabditis elegans GN=Y94H6A.8 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.323e-14 Identity = 54/145 (37.24%), Postives = 76/145 (52.41%), Query Frame = 2 Query: 104 FLRELKEEGFLRALLDGNLMQTKLHNRGATLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKS--RYNASQVPPEWHGWLHCMTDHTGDELLMLKP---KRYGLEHRENLSGEGEEFIYHSKGHFLNPEHKDWSGYQPWEPSKKE*F 523 F + +KE G ++A+L + R TLVG D FGN+YY+ R+RWVE+ +K Y+A+QVPPEWH WLH H D+ +KP + + LEH+EN S IY K + P + Q W+P +K F Sbjct: 15 FGQMVKEIGGVKAVLKKRYLMDA--TRVGTLVGSDNFGNRYYENNAYFVPRNRWVEFPDKVWLDYDATQVPPEWHSWLH----HITDDAPSVKPPPTQDWVLEHKENTS------IYADKKYV--PYSTTRTKIQGWQPGEKPQF 145
BLAST of FC932371 vs. ExPASy Swiss-Prot
Match: NDUAC_MOUSE (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Mus musculus GN=Ndufa12 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.257e-14 Identity = 40/95 (42.11%), Postives = 51/95 (53.68%), Query Frame = 2 Query: 182 RGATLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKSR-------YNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHRENLSGEGEEFIYHS 445 R TLVG DK+GNKYY+ + FGRHRWV Y + + S VPPEWH WLHCMTD K H+ N+S E+++ +S Sbjct: 34 RIGTLVGEDKYGNKYYEDNKQFFGRHRWVIYTTEMNGKNTFWDVDGSMVPPEWHRWLHCMTDDPPTTNPPTARKFIWTNHKFNVSATPEQYVPYS 128
BLAST of FC932371 vs. ExPASy Swiss-Prot
Match: NDUAC_PONPY (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Pongo pygmaeus GN=NDUFA12 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.028e-14 Identity = 45/132 (34.09%), Postives = 63/132 (47.73%), Query Frame = 2 Query: 71 LKSIRERGLGSFLRELKEEGFLRALLDGNLMQTKLHNRGATLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKSR-------YNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHRENLSGEGEEFIYHS 445 L + +RGL G+LR N + TLVG DK+GNKYY+ + FGRHRWV Y + + S VPPEWH WLH +TD + K H+ N++G E+++ +S Sbjct: 3 LVQVLKRGLQRITGHGGLRGYLRVFFRTNDAKV------GTLVGEDKYGNKYYEDNKQFFGRHRWVVYTTEMNGKNTFWDVDGSMVPPEWHHWLHSITDDPPTTKPLTARKFIWTNHKFNVTGTPEQYVPYS 128
BLAST of FC932371 vs. ExPASy Swiss-Prot
Match: NDUAC_DICDI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium discoideum GN=ndufa12 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 8.576e-14 Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 191 TLVGVDKFGNKYYQKLDEQFGRHRWVEYAEKSRYNASQVPPEWHGWLHCMTDHTGDELLMLKPKRYGLEHRENLSG 418 TLVGVDK GN+YY+ E +GRHRWVEY + + + +PPE+H W+H ++D E+L P Y H N +G Sbjct: 33 TLVGVDKVGNRYYENRQEIYGRHRWVEYGDYKSNDPTTIPPEYHSWIHHVSDKLPSEMLPFSP-TYKRPHIANPTG 107 The following BLAST results are available for this feature:
BLAST of FC932371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932371 ID=FC932371; Name=FC932371; organism=Citrus clementina; type=EST; length=550bpback to top |