FC932498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932498 vs. ExPASy Swiss-Prot
Match: TL17_ARATH (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At5g53490 PE=1 SV=2) HSP 1 Score: 301.212 bits (770), Expect = 3.576e-81 Identity = 157/239 (65.69%), Postives = 186/239 (77.82%), Query Frame = 1 Query: 7 MATISVPLSHNTSSLQHLSTIRHRFHFPRSSHSPLTVACSA---RRNSSEPKESFSHLKELKGVACGFLAAWAVTAASPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKAHLEGAVFKNTVLSGSTFNEAQLQDAVFEDTIIGYIDLQKLCTNTTLSPDGRAELG 714 MA++ V + N S S + R S +TV CSA R N K+S LKEL +AC L A +T ASPVIAANQRLPPLSTEPDRCE+AFVGNTIGQANGVYDKP+DLRFCDYTN+++NLKGK+L+AALM AKFDGADM+EVVMSKAYAV ASFKGV+F+NAV+DRVNFGK++L+GAVF+NTVLSGSTF EA L+D VFEDTIIGYIDLQK+C N +++ +GR LG Sbjct: 1 MASLPVQFTRNQISSPFFSV-----NLRREPRSLVTVHCSAGENRENGEGVKKSLFPLKELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLG 234
BLAST of FC932498 vs. ExPASy Swiss-Prot
Match: TL225_ARATH (Thylakoid lumenal protein At1g12250, chloroplastic OS=Arabidopsis thaliana GN=At1g12250 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 67/245 (27.35%), Postives = 108/245 (44.08%), Query Frame = 1 Query: 19 SVPLSHNTSSLQHLSTIRHRFHFPR--------SSHSPLTVACSARRNSSEPKESFSHLKELKGVACGFLAAWAVTAASPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKAHLEGAVFKNTVLSGSTFNEAQLQDAVFEDTIIGYIDLQKLC-----TNTTLSPDGRAELG 714 S+ +S ++SS+ R +HF R SS S L + S+ N+ E S + K + +AA + ++S V P E +R E G G + DL ++NE N + + +A M ++ F G+ + + KA A A+F G D S+ ++DR+ +A+L AV +VL+ S A+++ A F D +I + Q LC TN D R LG Sbjct: 13 SLDISRSSSSVS-----RSPYHFQRYLLRRLQLSSRSNLEIKDSS--NTREGCCSSAESNTWKRILSAAMAAAVIASSSGV--------PAMAELNRFEADTRGE-FGIGSAAQYGSADLSKTVHSNE--NFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLG 239 The following BLAST results are available for this feature:
BLAST of FC932498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932498 ID=FC932498; Name=FC932498; organism=Citrus clementina; type=EST; length=716bpback to top |