FC932653

Overview
NameFC932653
Unique NameFC932653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932653 vs. ExPASy Swiss-Prot
Match: BGLX_SALTY (Periplasmic beta-glucosidase OS=Salmonella typhimurium GN=bglX PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 67/242 (27.69%), Postives = 109/242 (45.04%), Query Frame = 3
Query:   15 ILVVGTHADDLGYQCGGWTKTWFGMSGKITIGTTILEAVKEAVGDETEVIYEKYP------------------------SPDTFV------AGDFSFAIAAVGE-EPYAETLGDNSELIIPLNGGDVIS-LVAERIPTLAILVSGRPLVLEPQLLEKADALVAAWLPGSEG-SGIADVVFGDHDFTGRLPVTWYRSVQRLPMNVA---------------------DNTYDPLFPLGFGLTY 578
            I VVG  AD      G W+      +G      T+L  ++ AVGD  +++Y K                          SP   +      A      +A VGE +  A      + + IP +  D+I+ L A   P + +L++GRPL L  +  ++ADA++  W  G+EG + IADV+FGD++ +G+LP+++ RSV ++P+  +                     D    PL+P G+GL+Y
Sbjct:  413 IAVVGPLADSQRDVMGSWSA-----AGVANQSVTVLAGIQNAVGDGAKILYAKGANITNDKGIVDFLNLYEEAVKIDPRSPQAMIDEAVQAAKQADVVVAVVGESQGMAHEASSRTNITIPQSQRDLITALKATGKPLVLVLMNGRPLALVKED-QQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPISFPRSVGQIPVYYSHLNTGRPYNPEKPNKYTSRYFDEANGPLYPFGYGLSY 648          
BLAST of FC932653 vs. ExPASy Swiss-Prot
Match: GLUA_DICDI (Lysosomal beta glucosidase OS=Dictyostelium discoideum GN=gluA PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 63/212 (29.72%), Postives = 100/212 (47.17%), Query Frame = 3
Query:    9 KRILVVGTHADDLGYQCGGWTKTWFGM--SGKITIGTTILEAVKEAVGDETEVIYEK-------YPSPDTFV------AGDFSFAIAAVGEEPYAETLGDNSELIIPLNGGDVIS-LVAERIPTLAILVSGRPLVLEPQLLEKADALVAAWLPGSE-GSGIADVVFGDHDFTGRLPVTWYRSVQRLPMNV-----ADNTYDPLFPLGFGLTY 578
            K +L+ G  AD +    GGW+  W G     +   GT+IL  ++E   D  +   +         P+  T +      A      +  +GE P AET GD  +L +  N   ++  LV    P + ILV  RP +L P L+    A++ A+LPGSE G  IA+++ G+ + +GRLP+T+  +   + +        +    PLF  G GL+Y
Sbjct:  488 KNVLLTGPSADSIRNLNGGWSVHWQGAYEDSEFPFGTSILTGLREITNDTADFNIQYTIGHEIGVPTNQTSIDEAVELAQSSDVVVVVIGELPEAETPGDIYDLSMDPNEVLLLQQLVDTGKPVVLILVEARPRILPPDLVYSCAAVLMAYLPGSEGGKPIANILMGNVNPSGRLPLTYPGTTGDIGVPYYHKYSENGVTTPLFQFGDGLSY 699          
BLAST of FC932653 vs. ExPASy Swiss-Prot
Match: BGLX_ECOLI (Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) GN=bglX PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 67/242 (27.69%), Postives = 109/242 (45.04%), Query Frame = 3
Query:   15 ILVVGTHADDLGYQCGGWTKTWFGMSGKITIGTTILEAVKEAVGDETEVIYEKYP------------------------SPDTFV------AGDFSFAIAAVGE-EPYAETLGDNSELIIPLNGGDVIS-LVAERIPTLAILVSGRPLVLEPQLLEKADALVAAWLPGSEG-SGIADVVFGDHDFTGRLPVTWYRSVQRLPMNVA---------------------DNTYDPLFPLGFGLTY 578
            I VVG  AD      G W+      +G      T+L  +K AVG+  +V+Y K                          SP   +      A      +A VGE +  A      +++ IP +  D+I+ L A   P + +L++GRPL L  +  ++ADA++  W  G+EG + IADV+FGD++ +G+LP+++ RSV ++P+  +                     D     L+P G+GL+Y
Sbjct:  413 IAVVGPLADSKRDVMGSWSA-----AGVADQSVTVLTGIKNAVGENGKVLYAKGANVTSDKGIIDFLNQYEEAVKVDPRSPQEMIDEAVQTAKQSDVVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKED-QQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALYPFGYGLSY 648          
The following BLAST results are available for this feature:
BLAST of FC932653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
BGLX_SALTY7.505e-1527.69Periplasmic beta-glucosidase OS=Salmonella typhimu... [more]
GLUA_DICDI2.184e-1429.72Lysosomal beta glucosidase OS=Dictyostelium discoi... [more]
BGLX_ECOLI8.298e-1427.69Periplasmic beta-glucosidase OS=Escherichia coli (... [more]
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Properties
Property NameValue
Genbank descriptionC34210H10EF PostHarveN Citrus clementina cDNA clone C34210H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932653 ID=FC932653; Name=FC932653; organism=Citrus clementina; type=EST; length=709bp
GAAATGCTAAAAGAATTCTTGTTGTTGGAACACATGCTGATGATCTTGGT
TATCAGTGTGGAGGATGGACGAAAACTTGGTTCGGAATGAGTGGCAAGAT
TACAATTGGAACAACCATTTTGGAGGCAGTGAAAGAAGCAGTTGGAGACG
AAACGGAAGTGATTTATGAAAAATATCCATCCCCGGACACCTTTGTAGCA
GGAGATTTTTCTTTTGCCATTGCAGCTGTCGGTGAAGAACCATATGCTGA
AACCTTGGGTGACAACTCAGAGCTTATAATCCCCTTGAATGGAGGTGATG
TTATAAGCTTGGTCGCTGAAAGAATCCCCACATTGGCAATTTTGGTATCT
GGAAGGCCCTTAGTTCTAGAACCACAGTTGTTGGAAAAGGCAGACGCACT
GGTCGCTGCTTGGTTGCCAGGAAGTGAAGGAAGTGGAATTGCTGATGTTG
TATTTGGAGATCATGATTTCACAGGTCGACTCCCAGTCACATGGTATAGA
AGCGTTCAACGGCTACCTATGAATGTTGCAGATAACACATATGACCCTTT
ATTTCCTCTCGGATTTGGGTTGACGTACAAGAAGGAGAAATCCTTGCACT
AAATGATTTATGGCCAATGCTGGAAAAAGGTTTGAGATGCTTGAAATCCT
CAGTTTCTGCTCACTTGCTACTGCTGCTAGACTTGTGCTGATTTTTCACA
TTGTCATTC
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