BQ623020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 5.246e-82 Identity = 135/148 (91.22%), Postives = 145/148 (97.97%), Query Frame = 2 Query: 2 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDR 445 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAWSGIPWFEAGADPGAIAPFSFG+LLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+TAENFAN TGEQGYPGGKFFDPL LAGT+ +GVY+PDTEKL+R Sbjct: 74 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLER 221 HSP 2 Score: 25.0238 bits (53), Expect = 5.246e-82 Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 438 LTGLKVAEIKHARL 479 L LKVAEIKHARL Sbjct: 219 LERLKVAEIKHARL 232
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 6.265e-80 Identity = 133/148 (89.86%), Postives = 144/148 (97.30%), Query Frame = 2 Query: 2 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDR 445 SLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+TAENFAN TGEQGYPGGKFFDPL LAGT+ +GVY+PDTEKL+R Sbjct: 74 SLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLER 221 HSP 2 Score: 22.7126 bits (47), Expect = 6.265e-80 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 438 LTGLKVAEIKHARL 479 L LK+AEIKH+RL Sbjct: 219 LERLKLAEIKHSRL 232
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 8.170e-80 Identity = 132/148 (89.19%), Postives = 144/148 (97.30%), Query Frame = 2 Query: 2 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDR 445 SLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIFVGQAW+GIPWFEAGADPGA+APFSFG+LLGTQLLLMGWVESKRWVDFF+P+SQSVEWATPWSRTAENF+N+TGEQGYPGGKFFDPL LAGTI +GVY PDT+KL+R Sbjct: 79 SLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLER 226 HSP 2 Score: 23.8682 bits (50), Expect = 8.170e-80 Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 438 LTGLKVAEIKHARL 479 L LK+AEIKHARL Sbjct: 224 LERLKLAEIKHARL 237
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 8.910e-21 Identity = 53/134 (39.55%), Postives = 71/134 (52.99%), Query Frame = 2 Query: 2 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL 385 SLPGD+GFDPLGLG DP LKW +AEL+H RWAM GIF+ + + I W+ AG +L +L+L+GW E +RW D P + + P ++ + GYPGG +FDPL Sbjct: 81 SLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFT---DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT------DVGYPGGLWFDPL 205
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 9.851e-20 Identity = 51/134 (38.06%), Postives = 71/134 (52.99%), Query Frame = 2 Query: 2 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL 385 SLPGD+GFDPLGL DP L+W ++AEL+H RWAM GIF+ + + I W+ AG +L +L+L+GW E +RW D P + + P ++ + GYPGG +FDPL Sbjct: 81 SLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFT---DTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT------DVGYPGGLWFDPL 205
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.858e-18 Identity = 53/141 (37.59%), Postives = 79/141 (56.03%), Query Frame = 2 Query: 2 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIK 406 SLPGD GFDPLGL +DP L+W+ +AEL++GRWAM V G+ + + ++ I W+ AG + S +L + +L +VE +RW D NP S + + + ++ GE GYPGG F+PL A T++ Sbjct: 69 SLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFA---SSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQD------PIFKQYSLPAGEVGYPGG-IFNPLNFAPTLE 199
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.204e-17 Identity = 53/139 (38.13%), Postives = 77/139 (55.40%), Query Frame = 2 Query: 2 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGT 400 SL GD GFDPLGL +DP LKW+ +AEL++GRWAM V G+ + + ++ I W++AG + S +L + +L +VE +RW D NP S + + + ++ GE GYPGG F+PL A T Sbjct: 70 SLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFA---SSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQD------PIFKQYSLPKGEVGYPGG-IFNPLNFAPT 198
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.573e-13 Identity = 55/182 (30.22%), Postives = 76/182 (41.76%), Query Frame = 2 Query: 2 SLPGDYGFDPLGLGKDPAFLKW-------------------------------------------YREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAG--------ADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLA 394 SL GDYGFDP GLGK +L++ +RE ELIHGRWAM A +G + +G+ W +AG + G PFS +L+ ++L++G++E +R N E S ++ YPGGKFFDPL LA Sbjct: 68 SLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR-----NAELDS------------------EKRLYPGGKFFDPLGLA 226 HSP 2 Score: 21.9422 bits (45), Expect = 4.573e-13 Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 447 LKVAEIKHARL 479 L++AEIKHARL Sbjct: 235 LQLAEIKHARL 245
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.394e-12 Identity = 53/151 (35.10%), Postives = 67/151 (44.37%), Query Frame = 2 Query: 8 PGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF---VGQAWSGIP-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQG--YPGGKFFDPLCLA 394 PGDYG+D GL DP R E+IHGRWAM +G V Q W G+ WF+AG+ +P + S ++LG Q+LLMG VE R N + GE YPGG++FDPL LA Sbjct: 75 PGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFR----------------------INGLDGVGEGNDLYPGGQYFDPLGLA 203
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.432e-12 Identity = 50/147 (34.01%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 2 SLPGDYGFDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVVGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----SLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL 385 SLPGDYGFDPLGL DP F+ +W E+I+GR+AM VG ++G+ + + WF+ G P A +++ +L ++ LMG+ E +R+ D+ P S ++ E +G YPGG FF+PL Sbjct: 71 SLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPA-GTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFL----GLEKGFGGSGNPAYPGGPFFNPL 211 The following BLAST results are available for this feature:
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623020 ID=BQ623020; Name=BQ623020; organism=Citrus sinensis; type=EST; length=480bpback to top |