BQ623216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623216 vs. ExPASy Swiss-Prot
Match: CSN1_ARATH (COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana GN=CSN1 PE=1 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 1.844e-62 Identity = 118/137 (86.13%), Postives = 130/137 (94.89%), Query Frame = 3 Query: 3 SRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRAMLLRANLLKHEYNVRAARKL 413 SRYASCL+YL +LK+NLLLDIHLHDHV+TLYDQIR KALIQYT PFVSVDL MA+AFKTSV+G+EKELEALITDNQIQARIDSHNKILYARHADQRNATFQ+VLQ G+EFD+DVRAMLLRANLLKHEY+ R+ARKL Sbjct: 305 SRYASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQMGNEFDRDVRAMLLRANLLKHEYHARSARKL 441
BLAST of BQ623216 vs. ExPASy Swiss-Prot
Match: CSN1_DICDI (COP9 signalosome complex subunit 1 OS=Dictyostelium discoideum GN=csn1 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.127e-35 Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 3 Query: 3 SRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRAMLLRANLLKHEYNVRAARK 410 ++Y SCL YL +K LLLDIHL+ HVE LY +IR+KAL+QY P+ SVD+++MA+AF T+V +EKE+ LI +N+IQARIDSHNK LYAR ADQR TF++ +Q GS+F ++LLR +L + + + RK Sbjct: 293 TKYGSCLKYLDKMKPILLLDIHLYKHVEILYQRIRSKALVQYFSPYQSVDMNIMASAFNTTVTLLEKEISKLIMENEIQARIDSHNKRLYARKADQRTTTFEKTVQVGSDFQNSSNSLLLRLEMLNNNISTVSNRK 428
BLAST of BQ623216 vs. ExPASy Swiss-Prot
Match: CSN1_MOUSE (COP9 signalosome complex subunit 1 OS=Mus musculus GN=Gps1 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.922e-35 Identity = 74/133 (55.64%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 3 SRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRAMLLRANLLKHEYNVRA 401 S+YASCL L +K NLLLD++L HV TLY QIRN+ALIQY P+VS D+H MA AF T+VA +E EL LI + I ARIDSH+KILYAR DQR+ TF++ L G EF + +AM+LRA +L+++ +V++ Sbjct: 316 SKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVKS 448
BLAST of BQ623216 vs. ExPASy Swiss-Prot
Match: CSN1_XENLA (COP9 signalosome complex subunit 1 OS=Xenopus laevis GN=csn1 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.510e-35 Identity = 73/133 (54.89%), Postives = 99/133 (74.44%), Query Frame = 3 Query: 3 SRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRAMLLRANLLKHEYNVRA 401 S+YASCL L +K NLLLD++L HV TLY QIRN+ALIQY P+VS D++ MA AF T+V+ +E EL LI + I ARIDSH+KILYAR DQR+ TF++ LQ G EF + +AM+LRA +L+++ +V++ Sbjct: 332 SKYASCLKMLDEIKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMYKMATAFNTTVSALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSLQMGREFQRRAKAMILRAAVLRNQIHVKS 464
BLAST of BQ623216 vs. ExPASy Swiss-Prot
Match: CSN1_HUMAN (COP9 signalosome complex subunit 1 OS=Homo sapiens GN=GPS1 PE=1 SV=4) HSP 1 Score: 148.288 bits (373), Expect = 2.510e-35 Identity = 73/133 (54.89%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 3 SRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRAMLLRANLLKHEYNVRA 401 S+YASCL L +K NLLLD++L HV TLY QIRN+ALIQY P+VS D+H MA AF T+VA +E EL LI + I AR+DSH+KILYAR DQR+ TF++ L G EF + +AM+LRA +L+++ +V++ Sbjct: 336 SKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKS 468
BLAST of BQ623216 vs. ExPASy Swiss-Prot
Match: CSN1_RAT (COP9 signalosome complex subunit 1 OS=Rattus norvegicus GN=Gps1 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.281e-35 Identity = 73/133 (54.89%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 3 SRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRAMLLRANLLKHEYNVRA 401 S+YASCL L +K NLLLD++L HV TLY QIRN+ALIQY P+VS D+H MA AF T+VA +E EL +I + I ARIDSH+KILYAR DQR+ TF++ L G EF + +AM+LRA +L+++ +V++ Sbjct: 316 SKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQVILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVKS 448
BLAST of BQ623216 vs. ExPASy Swiss-Prot
Match: CSN1_DROME (COP9 signalosome complex subunit 1b OS=Drosophila melanogaster GN=CSN1b PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.246e-34 Identity = 70/133 (52.63%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 3 SRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRAMLLRANLLKHEYNVRA 401 S+YASCL L ++ NLL+D+++ HV TLY +IRN+ALIQY P++S D+H MA AF +SV +E E+ LI D QIQARIDSHNKIL+A+ ADQRN+TF+R L G ++ + R ++LRA +LK +V++ Sbjct: 365 SKYASCLTLLDEIRDNLLVDMYIAPHVTTLYTKIRNRALIQYFSPYMSADMHKMAMAFNSSVGDLENEVMQLILDGQIQARIDSHNKILFAKEADQRNSTFERALIMGKQYQRHTRMLVLRAAMLKSHIHVKS 497
BLAST of BQ623216 vs. ExPASy Swiss-Prot
Match: CSN1_NEUCR (COP9 signalosome complex subunit 1 OS=Neurospora crassa GN=csn-1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.921e-15 Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 3 Query: 6 RYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRAMLLRANLLKHEYNVRAARK 410 RYA+C++ L + + + LLDI+L HV LY IR K+++QY PF V L M AF IE EL +I D ++ ARID+ NK + LQT +++ + R N++ + V+ +RK Sbjct: 285 RYAACIEILESYRPDYLLDIYLQKHVPKLYADIRTKSIVQYLKPFSCVRLDTMQKAFNGPGPSIEDELFTMIKDGKLNARIDAINK--------------SKALQTLENYEKQALDRIRRMNIMAADLEVKGSRK 405
BLAST of BQ623216 vs. ExPASy Swiss-Prot
Match: CSN1_EMENI (COP9 signalosome complex subunit 1 OS=Emericella nidulans GN=csnA PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 6.427e-15 Identity = 48/143 (33.57%), Postives = 74/143 (51.75%), Query Frame = 3 Query: 3 SRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAF-----------KTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRAMLLRANLLKHEYNVR 398 S++ CL+ L +A+ LLDIHL HV+ LY++IR K++ QY PF V L MA F S + +EL +LI D + ARID +L + D+R + VL + + ++ LLR+N+++ VR Sbjct: 324 SKFRPCLEILEAYRADYLLDIHLQRHVQVLYNRIRTKSIQQYLIPFNRVSLESMAKIFVLGNPTSQSSQSDSKSAFVQELISLIQDGTLDARIDLEKHVLVSTQGDKRIEVQEAVLDSLDNYVREAHLRLLRSNIIRAGLEVR 466
BLAST of BQ623216 vs. ExPASy Swiss-Prot
Match: CSN1_BRAOL (COP9 signalosome complex subunit 1 (Fragment) OS=Brassica oleracea GN=CSN1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.935e-11 Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 3 Query: 204 ELEAL-ITDNQIQARIDSHNKILYARHADQRNATFQR 311 ELEAL ITDNQIQARIDSHNKILYARHADQRNATFQ+ Sbjct: 1 ELEALLITDNQIQARIDSHNKILYARHADQRNATFQK 37 The following BLAST results are available for this feature:
BLAST of BQ623216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623216 ID=BQ623216; Name=BQ623216; organism=Citrus sinensis; type=EST; length=569bpback to top |