BQ623390

Overview
NameBQ623390
Unique NameBQ623390
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3656 contig Csv1_Contig3656:214..840. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623390 vs. ExPASy Swiss-Prot
Match: PPDE1_XENLA (PPPDE peptidase domain-containing protein 1 OS=Xenopus laevis GN=pppde1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.826e-15
Identity = 42/114 (36.84%), Postives = 65/114 (57.02%), Query Frame = 1
Query:  139 FKDGIGVGGIFHSAVQVYGDEEWSFGFCEQGSGVFSCPSGRNP----MYTYRESIVLGKTNFSIFKVNQILRELSREWPGNSYDLLGRNCNHFCDEFCDRLGVPKLPGWVNRFA 468
            +   +G+G +FHS +QVYG E    G     SGVF    G +      + ++E+I LG T+F+   + +I+ EL +E+ GN+Y L+ +NCNHF     + L   ++P WVNR A
Sbjct:   19 YTSSLGIG-VFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGDTFKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLA 131          
BLAST of BQ623390 vs. ExPASy Swiss-Prot
Match: U326_ARATH (UPF0326 protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.022e-14
Identity = 46/143 (32.17%), Postives = 77/143 (53.85%), Query Frame = 1
Query:   52 MTDVRLHIYDVTNSGSEXXXXXXXXXXXXFKDGIGVGGIFHSAVQVYGDEEWSFGFCEQG-SGVFSCPSGRNPMYTYRESIVLGKTNFSIFKVNQILRELSREWPGNSYDLLGRNCNHFCDEFCDRLGVPKLPGWVNRFANAG 477
            +T V L++YD+T   +             +    G+G IFHS ++ + + E+ +G  E   SGV+       P + +R S++LG T+ S       + +LSR++ G++Y L+ +NCNHF +E C +L    +PGW+NR A  G
Sbjct:   25 LTPVYLNVYDLTPVNN-------------YLYWFGIG-IFHSGIEAH-NLEYCYGAHEYPTSGVYEVEPRNCPGFIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWINRLARVG 152          
BLAST of BQ623390 vs. ExPASy Swiss-Prot
Match: PPDE1_DANRE (PPPDE peptidase domain-containing protein 1 OS=Danio rerio GN=pppde1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.335e-14
Identity = 41/114 (35.96%), Postives = 65/114 (57.02%), Query Frame = 1
Query:  139 FKDGIGVGGIFHSAVQVYGDEEWSFGFCEQGSGVFSCPSGR----NPMYTYRESIVLGKTNFSIFKVNQILRELSREWPGNSYDLLGRNCNHFCDEFCDRLGVPKLPGWVNRFA 468
            F   +G+G +FHS +++YG E    G     SG+F    G        + ++E+IVLG T+F+   V +I+ E+ +E+ GN+Y L+ +NCNHF     + L   ++P WVNR A
Sbjct:   19 FTSSLGIG-VFHSGIEIYGREFAYGGHPYPFSGIFEITPGDATELGETFKFKEAIVLGSTDFTEEDVERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGREIPRWVNRLA 131          
BLAST of BQ623390 vs. ExPASy Swiss-Prot
Match: PPDE1_RAT (PPPDE peptidase domain-containing protein 1 OS=Rattus norvegicus GN=Pppde1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.743e-14
Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 1
Query:  139 FKDGIGVGGIFHSAVQVYGDEEWSFGFCEQGSGVFSCPSGR----NPMYTYRESIVLGKTNFSIFKVNQILRELSREWPGNSYDLLGRNCNHFCDEFCDRLGVPKLPGWVNRFA 468
            +   IG+G +FHS ++VYG E    G     SG+F    G        + ++E++VLG T+F    + +I+ EL +E+ GN+Y L+ +NCNHF     + L   ++P W+NR A
Sbjct:   20 YTSSIGIG-VFHSGIEVYGREFAYGGHPYPFSGIFEISPGNAAELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA 132          
BLAST of BQ623390 vs. ExPASy Swiss-Prot
Match: PPDE1_PONAB (PPPDE peptidase domain-containing protein 1 OS=Pongo abelii GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.743e-14
Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 1
Query:  139 FKDGIGVGGIFHSAVQVYGDEEWSFGFCEQGSGVFSCPSGR----NPMYTYRESIVLGKTNFSIFKVNQILRELSREWPGNSYDLLGRNCNHFCDEFCDRLGVPKLPGWVNRFA 468
            +   IG+G +FHS ++VYG E    G     SG+F    G        + ++E++VLG T+F    + +I+ EL +E+ GN+Y L+ +NCNHF     + L   ++P W+NR A
Sbjct:   20 YTSSIGIG-VFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA 132          
BLAST of BQ623390 vs. ExPASy Swiss-Prot
Match: PPDE1_PIG (PPPDE peptidase domain-containing protein 1 OS=Sus scrofa GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.743e-14
Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 1
Query:  139 FKDGIGVGGIFHSAVQVYGDEEWSFGFCEQGSGVFSCPSGR----NPMYTYRESIVLGKTNFSIFKVNQILRELSREWPGNSYDLLGRNCNHFCDEFCDRLGVPKLPGWVNRFA 468
            +   IG+G +FHS ++VYG E    G     SG+F    G        + ++E++VLG T+F    + +I+ EL +E+ GN+Y L+ +NCNHF     + L   ++P W+NR A
Sbjct:   20 YTSSIGIG-VFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA 132          
BLAST of BQ623390 vs. ExPASy Swiss-Prot
Match: PPDE1_MOUSE (PPPDE peptidase domain-containing protein 1 OS=Mus musculus GN=Pppde1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.743e-14
Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 1
Query:  139 FKDGIGVGGIFHSAVQVYGDEEWSFGFCEQGSGVFSCPSGR----NPMYTYRESIVLGKTNFSIFKVNQILRELSREWPGNSYDLLGRNCNHFCDEFCDRLGVPKLPGWVNRFA 468
            +   IG+G +FHS ++VYG E    G     SG+F    G        + ++E++VLG T+F    + +I+ EL +E+ GN+Y L+ +NCNHF     + L   ++P W+NR A
Sbjct:   20 YTSSIGIG-VFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA 132          
BLAST of BQ623390 vs. ExPASy Swiss-Prot
Match: PPDE1_HUMAN (PPPDE peptidase domain-containing protein 1 OS=Homo sapiens GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.743e-14
Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 1
Query:  139 FKDGIGVGGIFHSAVQVYGDEEWSFGFCEQGSGVFSCPSGR----NPMYTYRESIVLGKTNFSIFKVNQILRELSREWPGNSYDLLGRNCNHFCDEFCDRLGVPKLPGWVNRFA 468
            +   IG+G +FHS ++VYG E    G     SG+F    G        + ++E++VLG T+F    + +I+ EL +E+ GN+Y L+ +NCNHF     + L   ++P W+NR A
Sbjct:   20 YTSSIGIG-VFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA 132          
BLAST of BQ623390 vs. ExPASy Swiss-Prot
Match: PPDE1_CHICK (PPPDE peptidase domain-containing protein 1 OS=Gallus gallus GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14
Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 1
Query:  139 FKDGIGVGGIFHSAVQVYGDEEWSFGFCEQGSGVFSCPSGR----NPMYTYRESIVLGKTNFSIFKVNQILRELSREWPGNSYDLLGRNCNHFCDEFCDRLGVPKLPGWVNRFA 468
            +   +G+G +FHS ++VYG E    G     SG+F    G        + ++E++VLG T+F    + +I+ EL +E+ GN+Y L+ +NCNHF     + L   ++P WVNR A
Sbjct:   19 YTSSLGIG-VFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFMEDDIEKIVEELGKEFKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLA 131          
The following BLAST results are available for this feature:
BLAST of BQ623390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PPDE1_XENLA7.826e-1536.84PPPDE peptidase domain-containing protein 1 OS=Xen... [more]
U326_ARATH1.022e-1432.17UPF0326 protein At4g17486 OS=Arabidopsis thaliana ... [more]
PPDE1_DANRE1.335e-1435.96PPPDE peptidase domain-containing protein 1 OS=Dan... [more]
PPDE1_RAT1.743e-1435.09PPPDE peptidase domain-containing protein 1 OS=Rat... [more]
PPDE1_PONAB1.743e-1435.09PPPDE peptidase domain-containing protein 1 OS=Pon... [more]
PPDE1_PIG1.743e-1435.09PPPDE peptidase domain-containing protein 1 OS=Sus... [more]
PPDE1_MOUSE1.743e-1435.09PPPDE peptidase domain-containing protein 1 OS=Mus... [more]
PPDE1_HUMAN1.743e-1435.09PPPDE peptidase domain-containing protein 1 OS=Hom... [more]
PPDE1_CHICK2.277e-1435.09PPPDE peptidase domain-containing protein 1 OS=Gal... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00481 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00481 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623390 ID=BQ623390; Name=BQ623390; organism=Citrus sinensis; type=EST; length=627bp
AACTGCAAAAACGCCTTAGGGCCAAAAACTAGGGTTTAAGTAGCGACGAC
GATGACGGATGTGAGGCTTCACATTTACGATGTGACGAATAGTGGATCGG
AGAAGACGAACAATACTATTTTGAATATTAACAAGATCTTTAAAGACGGT
ATAGGCGTCGGCGGCATCTTTCACAGCGCCGTTCAGGTATATGGAGATGA
AGAATGGTCTTTTGGGTTTTGCGAACAAGGATCTGGAGTCTTTAGTTGTC
CATCTGGAAGGAATCCAATGTATACATATCGTGAGTCCATTGTTCTTGGG
AAAACAAACTTTTCAATCTTCAAGGTAAATCAGATACTACGGGAACTTAG
TAGAGAGTGGCCTGGAAATTCGTACGACTTGTTGGGCAGAAACTGCAACC
ACTTTTGTGATGAGTTTTGTGATAGACTTGGTGTGCCAAAGCTTCCAGGT
TGGGTTAATCGTTTTGCCAATGCCGGTGATGCTGCAATGGAAGTAGCAGG
AACCACAGCATTACGGGTGAGGCAAGCCAAGACAGAGATCGTCTCAGCTA
GCAAAGTGGCATATCGGTTTCTCGCAGGCGTTGCTTCCAATGTCAATGGA
ACCAATGGGGCCCATGGAACTAATGGG
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