BQ623545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.289e-89 Identity = 80/89 (89.89%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P R ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGFVEGYR+ Sbjct: 86 PETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRV 174 HSP 2 Score: 152.91 bits (385), Expect = 6.289e-89 Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 PGGAFDPLGLADDPD FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVA+NAWAYATNFVPG Sbjct: 188 PGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPG 262 HSP 3 Score: 49.6766 bits (117), Expect = 6.289e-89 Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFA+N Sbjct: 72 PGDYGWDTAGLSADPETFARN 92
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.289e-89 Identity = 80/89 (89.89%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P R ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGFVEGYR+ Sbjct: 86 PETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRV 174 HSP 2 Score: 152.91 bits (385), Expect = 6.289e-89 Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 PGGAFDPLGLADDPD FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVA+NAWAYATNFVPG Sbjct: 188 PGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPG 262 HSP 3 Score: 49.6766 bits (117), Expect = 6.289e-89 Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFA+N Sbjct: 72 PGDYGWDTAGLSADPETFARN 92
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 6.289e-89 Identity = 79/89 (88.76%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P + ELEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR+ Sbjct: 88 PETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRV 176 HSP 2 Score: 151.754 bits (382), Expect = 6.289e-89 Identity = 70/75 (93.33%), Postives = 74/75 (98.67%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 PGGAFDPLGLADDPD FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVA+NAWAYATNFVPG Sbjct: 190 PGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPG 264 HSP 3 Score: 50.8322 bits (120), Expect = 6.289e-89 Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFAKN Sbjct: 74 PGDYGWDTAGLSADPETFAKN 94
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.963e-87 Identity = 79/89 (88.76%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P R ELEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYR+ Sbjct: 88 PETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRV 176 HSP 2 Score: 147.132 bits (370), Expect = 1.963e-87 Identity = 71/84 (84.52%), Postives = 75/84 (89.29%), Query Frame = 2 Query: 326 LVKDLTHFTPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 L + L PGGAFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL DHI DPVA+NAWAYATNFVPG Sbjct: 181 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVPG 264 HSP 3 Score: 49.6766 bits (117), Expect = 1.963e-87 Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFA+N Sbjct: 74 PGDYGWDTAGLSADPETFARN 94
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 5.657e-87 Identity = 78/89 (87.64%), Postives = 80/89 (89.89%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P R ELEVIH RWAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYR+ Sbjct: 88 PETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRV 176 HSP 2 Score: 150.984 bits (380), Expect = 5.657e-87 Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 2 Query: 326 LVKDLTHFTPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 L + L PGGAFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADPVA+NAWA+ATNFVPG Sbjct: 181 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPG 264 HSP 3 Score: 49.6766 bits (117), Expect = 5.657e-87 Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFA+N Sbjct: 74 PGDYGWDTAGLSADPETFARN 94
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 5.657e-87 Identity = 76/89 (85.39%), Postives = 80/89 (89.89%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P R ELEVIHSRWAMLGALGC FPE+L KNGVKFGEAVWFKAG+QIF+EGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYR+ Sbjct: 88 PETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRV 176 HSP 2 Score: 152.14 bits (383), Expect = 5.657e-87 Identity = 70/75 (93.33%), Postives = 74/75 (98.67%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 PGGAFDPLGLADDPD FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI+NLYDH+ADPVA+NAWA+ATNFVPG Sbjct: 190 PGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPG 264 HSP 3 Score: 49.6766 bits (117), Expect = 5.657e-87 Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFA+N Sbjct: 74 PGDYGWDTAGLSADPETFARN 94
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.251e-86 Identity = 76/89 (85.39%), Postives = 80/89 (89.89%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P R ELEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILA+WA QVVLMG +EGYR+ Sbjct: 88 PETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRV 176 HSP 2 Score: 150.984 bits (380), Expect = 1.251e-86 Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 2 Query: 326 LVKDLTHFTPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 L + L PGGAFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVA+NAWAYATNFVPG Sbjct: 181 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPG 264 HSP 3 Score: 49.6766 bits (117), Expect = 1.251e-86 Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFA+N Sbjct: 74 PGDYGWDTAGLSADPETFARN 94
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.128e-86 Identity = 78/89 (87.64%), Postives = 80/89 (89.89%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P R ELEVIH RWAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYR+ Sbjct: 60 PETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRV 148 HSP 2 Score: 149.443 bits (376), Expect = 2.128e-86 Identity = 72/84 (85.71%), Postives = 76/84 (90.48%), Query Frame = 2 Query: 326 LVKDLTHFTPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 L + L PGGAFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL DHIADPVA+NAWAYATNFVPG Sbjct: 153 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPG 236 HSP 3 Score: 49.6766 bits (117), Expect = 2.128e-86 Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFA+N Sbjct: 46 PGDYGWDTAGLSADPETFARN 66
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.979e-86 Identity = 77/89 (86.52%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P + ELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG VEGYRI Sbjct: 85 PETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 173 HSP 2 Score: 145.976 bits (367), Expect = 7.979e-86 Identity = 68/76 (89.47%), Postives = 73/76 (96.05%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPGS 580 PGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV +NAWAYATNFVPG+ Sbjct: 187 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGN 262 HSP 3 Score: 50.8322 bits (120), Expect = 7.979e-86 Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFAKN Sbjct: 71 PGDYGWDTAGLSADPETFAKN 91
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.300e-85 Identity = 76/89 (85.39%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P + ELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRI Sbjct: 78 PETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 166 HSP 2 Score: 144.821 bits (364), Expect = 2.300e-85 Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 PGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV +NAWAYATNFVPG Sbjct: 180 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 254 HSP 3 Score: 50.8322 bits (120), Expect = 2.300e-85 Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFAKN Sbjct: 64 PGDYGWDTAGLSADPETFAKN 84 The following BLAST results are available for this feature:
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623545 ID=BQ623545; Name=BQ623545; organism=Citrus sinensis; type=EST; length=665bpback to top |