BQ623811
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.143e-48 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 +FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 183 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255 HSP 2 Score: 63.1586 bits (152), Expect = 2.143e-48 Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 ACQVVLMGAVEGYRIAGGPLGEVTDP+YP Sbjct: 152 ACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.150e-48 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 +FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 134 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206 HSP 2 Score: 63.1586 bits (152), Expect = 2.150e-48 Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 ACQVVLMGAVEGYRIAGGPLGEVTDP+YP Sbjct: 103 ACQVVLMGAVEGYRIAGGPLGEVTDPIYP 131
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 8.052e-48 Identity = 70/73 (95.89%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 +FDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK Sbjct: 202 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274 HSP 2 Score: 62.7734 bits (151), Expect = 8.052e-48 Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 ACQV+LMGAVEGYRIAGGPLGEVTDP+YP Sbjct: 171 ACQVILMGAVEGYRIAGGPLGEVTDPIYP 199
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.055e-48 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 +FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267 HSP 2 Score: 61.6178 bits (148), Expect = 8.055e-48 Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 ACQVVLMGAVEGYR+AGGPLGEV DPLYP Sbjct: 164 ACQVVLMGAVEGYRVAGGPLGEVVDPLYP 192
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 8.055e-48 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 +FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267 HSP 2 Score: 62.003 bits (149), Expect = 8.055e-48 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 ACQVVLMGAVEGYRIAGGPLGEV DPLYP Sbjct: 164 ACQVVLMGAVEGYRIAGGPLGEVVDPLYP 192
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.055e-48 Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 +FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL+NL DHLADPVNNNAWAYATNFVPGK Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPGK 267 HSP 2 Score: 63.1586 bits (152), Expect = 8.055e-48 Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 ACQVVLMGA+EGYR+AGGPLGEVTDPLYP Sbjct: 164 ACQVVLMGAIEGYRVAGGPLGEVTDPLYP 192
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.050e-47 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 +FDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 195 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267 HSP 2 Score: 61.6178 bits (148), Expect = 1.050e-47 Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 ACQVVLMGAVEGYR+AGGPLGEV DPLYP Sbjct: 164 ACQVVLMGAVEGYRVAGGPLGEVVDPLYP 192
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.368e-47 Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 3 Query: 99 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK Sbjct: 207 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278 HSP 2 Score: 62.003 bits (149), Expect = 1.368e-47 Identity = 25/29 (86.21%), Postives = 29/29 (100.00%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 ACQV+LMGA+EGYR+AGGPLGEVTDP+YP Sbjct: 175 ACQVILMGAIEGYRVAGGPLGEVTDPIYP 203
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.368e-47 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 +FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 194 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266 HSP 2 Score: 61.2326 bits (147), Expect = 1.368e-47 Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 ACQVVLMGAVEGYR+AGGPLGEV DPLYP Sbjct: 163 ACQVVLMGAVEGYRVAGGPLGEVIDPLYP 191
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.368e-47 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 +FDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 193 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265 HSP 2 Score: 61.2326 bits (147), Expect = 1.368e-47 Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 ACQV+LMGAVEGYR+AGGPLGEV DPLYP Sbjct: 162 ACQVILMGAVEGYRVAGGPLGEVVDPLYP 190 The following BLAST results are available for this feature:
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623811 ID=BQ623811; Name=BQ623811; organism=Citrus sinensis; type=EST; length=425bpback to top |