BQ623850
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623850 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.198e-53 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 120 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 338 +FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 183 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255 HSP 2 Score: 78.5666 bits (192), Expect = 4.198e-53 Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 2 Query: 2 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYP 112 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP+YP Sbjct: 144 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180
BLAST of BQ623850 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.211e-53 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 120 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 338 +FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 134 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206 HSP 2 Score: 78.5666 bits (192), Expect = 4.211e-53 Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 2 Query: 2 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYP 112 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP+YP Sbjct: 95 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 131
BLAST of BQ623850 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.579e-52 Identity = 70/73 (95.89%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 120 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 338 +FDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK Sbjct: 202 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274 HSP 2 Score: 78.1814 bits (191), Expect = 1.579e-52 Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 2 Query: 2 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYP 112 AQSILAIWACQV+LMGAVEGYRIAGGPLGEVTDP+YP Sbjct: 163 AQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYP 199
BLAST of BQ623850 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.579e-52 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 120 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 338 +FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267 HSP 2 Score: 77.0258 bits (188), Expect = 1.579e-52 Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 2 Query: 2 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYP 112 AQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYP Sbjct: 156 AQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYP 192
BLAST of BQ623850 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.579e-52 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 120 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 338 +FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267 HSP 2 Score: 77.411 bits (189), Expect = 1.579e-52 Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 2 Query: 2 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYP 112 AQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYP Sbjct: 156 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYP 192
BLAST of BQ623850 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.579e-52 Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 3 Query: 120 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 338 +FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL+NL DHLADPVNNNAWAYATNFVPGK Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPGK 267 HSP 2 Score: 78.5666 bits (192), Expect = 1.579e-52 Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 2 Query: 2 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYP 112 AQSILAIWACQVVLMGA+EGYR+AGGPLGEVTDPLYP Sbjct: 156 AQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYP 192
BLAST of BQ623850 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 2.059e-52 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 120 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 338 +FDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 195 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267 HSP 2 Score: 77.0258 bits (188), Expect = 2.059e-52 Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 2 Query: 2 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYP 112 AQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYP Sbjct: 156 AQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYP 192
BLAST of BQ623850 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.682e-52 Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 3 Query: 123 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 338 FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK Sbjct: 207 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278 HSP 2 Score: 77.411 bits (189), Expect = 2.682e-52 Identity = 33/37 (89.19%), Postives = 37/37 (100.00%), Query Frame = 2 Query: 2 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYP 112 AQSILAIWACQV+LMGA+EGYR+AGGPLGEVTDP+YP Sbjct: 167 AQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYP 203
BLAST of BQ623850 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 2.684e-52 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 120 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 338 +FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 194 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266 HSP 2 Score: 76.6406 bits (187), Expect = 2.684e-52 Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 2 Query: 2 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYP 112 AQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYP Sbjct: 155 AQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYP 191
BLAST of BQ623850 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 2.684e-52 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3 Query: 120 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 338 +FDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 193 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265 HSP 2 Score: 76.6406 bits (187), Expect = 2.684e-52 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 2 Query: 2 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYP 112 AQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPLYP Sbjct: 154 AQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYP 190 The following BLAST results are available for this feature:
BLAST of BQ623850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623850 ID=BQ623850; Name=BQ623850; organism=Citrus sinensis; type=EST; length=419bpback to top |