CB290298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290298 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 8.613e-30 Identity = 72/122 (59.02%), Postives = 80/122 (65.57%), Query Frame = 3 Query: 9 KQIRSTRTQYMPDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLK-PAQPQGDTFFHA--LECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 365 KQIRSTRTQ+M D L +LQ KE LL EAN+ L+QR MEGYQ+N+LQLN SAED GYG GD F +ECEPTLQIGY DP SVVTAGPS+NNYM GWLP Sbjct: 140 KQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQR--------------MEGYQINSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQIGYHQGDPGSVVTAGPSMNNYMGGWLP 247
BLAST of CB290298 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 3.273e-29 Identity = 72/119 (60.50%), Postives = 81/119 (68.07%), Query Frame = 3 Query: 9 KQIRSTRTQYMPDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 365 KQIRSTRTQ M D L +LQ KE L+EAN+TLKQR LMEG +N LQ +A+D GYG + Q QGD FFH LECEPTLQIGYQ DPI+V AGPS+NNYM GWLP Sbjct: 138 KQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQR-------------LMEGSTLN-LQWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQ-NDPITVGGAGPSVNNYMAGWLP 241
BLAST of CB290298 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20 Identity = 59/121 (48.76%), Postives = 74/121 (61.16%), Query Frame = 3 Query: 9 KQIRSTRTQYMPDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQL-NPS-AEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPADPISVVTAGPSLNNYM-QGWL 362 +QIRSTRTQ+M D L +LQ +EQ+L EANKTLK+R E Q N Q+ +PS GYG +PAQ G+ F+H LECEPTLQIGY ++ TA ++NNYM GWL Sbjct: 136 RQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRR-------------FEESSQANQQQVWDPSNTHAVGYGRQPAQHHGEAFYHPLECEPTLQIGYHSDITMATATAS-TVNNYMPPGWL 242
BLAST of CB290298 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.055e-19 Identity = 60/122 (49.18%), Postives = 74/122 (60.66%), Query Frame = 3 Query: 9 KQIRSTRTQYMPDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCG-YGLKPAQPQ--GDTFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 365 KQIR+ RTQ+M D L +LQ KE++L+E NKTL+ L+L +GYQ+ LQLNP+ E+ YG Q Q FF LECEP LQIGYQ + AGPS+NNYM GWLP Sbjct: 140 KQIRALRTQFMLDQLNDLQSKERMLTETNKTLR-------------LRLADGYQM-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ--DGMGAGPSVNNYMLGWLP 245
BLAST of CB290298 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.800e-19 Identity = 60/124 (48.39%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 9 KQIRSTRTQYMPDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAED--CGYGLKPAQPQGDT---FFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 365 KQIR+ RTQ+M D L +LQ KE++L+E NKTL+ L+L +GYQ+ LQLNP+ ED YG Q Q ++ FF LECEP LQ+GYQ + AGPS NNYM GWLP Sbjct: 140 KQIRALRTQFMLDQLNDLQSKERMLNETNKTLR-------------LRLADGYQM-PLQLNPNQEDHHVDYGRHDQQQQQNSHHAFFQPLECEPILQMGYQGQQDHG-MEAGPSENNYMLGWLP 248
BLAST of CB290298 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 6.201e-12 Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 9 KQIRSTRTQYMPDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLME-GYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALEC--EPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 365 K +R+TRT+++ D LTELQ KEQ++SEAN+ L+++ H G Q+ E G + + P + +G G+ FFH L+ EPTLQIGY PA+ + + +N YM WLP Sbjct: 139 KHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHV--RGQQVWEQGCNLIGYERQPEVQQPLHG-------GNGFFHPLDAAGEPTLQIGY-PAEHHEAMNSA-CMNTYMPPWLP 249
BLAST of CB290298 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 6.201e-12 Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 9 KQIRSTRTQYMPDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLME-GYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALEC--EPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 365 K +R+TRT+++ D LTELQ KEQ++SEAN+ L+++ H G Q+ E G + + P + +G G+ FFH L+ EPTLQIGY PA+ + + +N YM WLP Sbjct: 139 KHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHV--RGQQVWEQGCNLIGYERQPEVQQPLHG-------GNGFFHPLDAAGEPTLQIGY-PAEHHEAMNSA-CMNTYMPPWLP 249 The following BLAST results are available for this feature:
BLAST of CB290298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290298 ID=CB290298; Name=CB290298; organism=Citrus sinensis; type=EST; length=629bpback to top |