CB290343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 3.961e-73 Identity = 126/169 (74.56%), Postives = 138/169 (81.66%), Query Frame = 3 Query: 63 GWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 GW + HATFY YGNLYS+GYGTNTAALSTALFNNG+SCGACFEI+C ND +WC GSI VTATNFC NNALPNNAGGWCN QQHFDLSQPVF++IAQY+AGIVPV+YRRVPC R+GGIRFTINGHSYFNLVLITNVGG GDV + +KGSRT W Sbjct: 26 GWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGW 194
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 271.937 bits (694), Expect = 1.505e-72 Identity = 125/172 (72.67%), Postives = 138/172 (80.23%), Query Frame = 3 Query: 54 YAQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 Y GW + HATFY YGNLYS+GYGTNTAALSTALFNNG+SCGACFEIKC +D WC G+I VTATNFC NNALPNNAGGWCN HFDLSQPVF++IAQYKAG+VPVSYRRVPC R+GGIRFTINGHSYFNLVL+TNVGG GDV +V++KGSRT W Sbjct: 26 YDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRW 197
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 1.079e-70 Identity = 124/188 (65.96%), Postives = 144/188 (76.60%), Query Frame = 3 Query: 6 FXGLMLLGIXYLVXCVYAQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 F ++++G+ Y GW + HATFY YGNLYS+GYGT+TAALSTALFNNG+SCG+CFEI+C ND +WC GSI VTATNFC NNAL NN GGWCN +HFDL+QPVF++IAQY+AGIVPVSYRRVPC R+GGIRFTINGHSYFNLVLITNVGG GDV + +IKGSRT W Sbjct: 6 FLVMIMVGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVW 193
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 8.547e-68 Identity = 122/195 (62.56%), Postives = 141/195 (72.31%), Query Frame = 3 Query: 3 EFXGLMLLGIXYLVXCV------YAQGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 EF G M++ + ++ + Y+ GW + ATFY YGNLYS+GYGTNTAALSTALFN G SCGACF+IKCV+DP+WC G+I VT TNFC N A NNAGGWCN Q HFDL+QP+F +IAQYKAG+VPV YRRV C RKGGIRFTINGHSYFNLVLITNV G GDV +VSIKG+ T W Sbjct: 2 EFFGKMIISLSLMMMIMWKSVDGYSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRW 196
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 4.690e-66 Identity = 117/176 (66.48%), Postives = 136/176 (77.27%), Query Frame = 3 Query: 51 VYAQG-WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGS--IFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 +Y+ G W + HATFY YGNLYS+GYGTNTAALSTALFNNGMSCGACFE+KC NDP+WC +GS I +TATNFC N A P++ GGWCN ++HFDL+ PVF +IAQY+AGIVPVSYRRVPC ++GGIRFTINGH YFNLVLITNV G GD+ S+KGSRT W Sbjct: 25 IYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGW 200
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 3.040e-65 Identity = 115/167 (68.86%), Postives = 130/167 (77.84%), Query Frame = 3 Query: 63 GWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRT 563 GW HATFY YGNLY +GYGTNTAALSTALFNNG++CGAC+E+KC +DPRWC +I VTATNFC N L N+ GGWCN QHFDL++P F QIAQY+AGIVPVS+RRVPC +KGGIRFTINGHSYFNLVLI+NVGG GDV AVSIKGS+T Sbjct: 29 GWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKT 195
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 2.845e-63 Identity = 111/170 (65.29%), Postives = 128/170 (75.29%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAG--SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 W HATFY YGNLYS+GYGTNTAALST+LFN+G SCGACFEIKCVNDP+WC G S+FVTATNFC N A P++ GGWCN + HFDL+ PVF +IA+Y+AGIVP+SYRRV C + GGIRFTINGH YFNLVLITNV G GD+ S+KGS+T W Sbjct: 34 WQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGW 203
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.412e-62 Identity = 113/176 (64.20%), Postives = 131/176 (74.43%), Query Frame = 3 Query: 51 VYAQG-WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAG--SIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 VY+ G W + HATFY YGNLYS+GYG NTAALSTALFNNG SCGACFEIKC +DPRWC G SI VTATNFC N A P++ GGWCN ++HFDL+ P+F +I Y+AGIVPVSYRRVPC + GGIRFT+NG YFNLVL+TNV G GD+ VS+KGS+TDW Sbjct: 30 VYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDW 205
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 2.409e-62 Identity = 113/194 (58.25%), Postives = 139/194 (71.65%), Query Frame = 3 Query: 3 EFXGLMLLGIXYLVXCVYA------QGWTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTD 566 E+ ++ L + L C+Y+ GW HATFY YGNL+S+GYG TAALSTALFN+G CGACFE++C +DP WC GSI V+ATNFC N AL N+ GGWCN +HFDL++P F QIAQY+AGIVPV++RRVPC + GGIRFTING+ YF+LVLITNVGG GD+RAVS+KGS+TD Sbjct: 5 EYSHILFLSLCTLNFCLYSINSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTD 198
BLAST of CB290343 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 4.108e-62 Identity = 108/168 (64.29%), Postives = 126/168 (75.00%), Query Frame = 3 Query: 66 WTDDHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRAGSIFVTATNFCARNNALPNNAGGWCNLHQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGDGDVRAVSIKGSRTDW 569 W HATFY YGNLYS GYGTNTAALST LFN+G +CG+C+E++C ND +WC GS+ VTATN C N ALPN+ GGWCN + HFD+++P F QI Y+AGIVPVSYRRVPC +KGGIRFTINGHSYFNLVL+TNV G GDV++VSIKGS T W Sbjct: 29 WQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGW 196 The following BLAST results are available for this feature:
BLAST of CB290343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290343 ID=CB290343; Name=CB290343; organism=Citrus sinensis; type=EST; length=569bpback to top |